RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 CLRN2A0PK11 232 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 C21orf2O43822 256 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 RAPGEF1Q13905 1077 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 MCM6Q14566 821 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 ZFYVE27Q5T4F4 411 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 CIAPIN1Q6FI81 312 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 PROM2Q8N271 834 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 NOX5Q96PH1 765 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 CARD6Q9BX69 1037 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 DNAI2Q9GZS0 605 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 ZSWIM4Q9H7M6 989 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 EPN1Q9Y6I3 576 aaPredicted RBP8.13□□□□□ -1.11
NPHP3-208ENST00000490993 FAM205CA6NFA0 338 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 USP17L10C9JJH3 530 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 GH2P01242 217 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 ASNSP08243 561 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 DALRD3Q5D0E6 543 aaKnown RBP8.13□□□□□ -1.11
NPHP3-208ENST00000490993 NELFCDQ8IXH7 590 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 MB21D1Q8N884 522 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 KCNF1Q9H3M0 494 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 FEM1BQ9UK73 627 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 CCPG1Q9ULG6 757 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 TMCO5BA8MYB1 307 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 FOXN1O15353 648 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 MFAP3LO75121 409 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 SETQ01105 290 aaPredicted RBP8.13□□□□□ -1.11
NPHP3-208ENST00000490993 CCDC170Q8IYT3 715 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 GPR161Q8N6U8 529 aaKnown RBP8.13□□□□□ -1.11
NPHP3-208ENST00000490993 TBC1D7Q9P0N9 293 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 PIM2Q9P1W9 311 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 PLSCR1O15162 318 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 FOXP2O15409 715 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 PLA2G4BP0C869 781 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 XRCC5P13010 732 aaKnown RBP8.13□□□□□ -1.11
NPHP3-208ENST00000490993 LRCH2Q5VUJ6 765 aa8.13□□□□□ -1.11
NPHP3-208ENST00000490993 TDRD3Q9H7E2 651 aaKnown RBP8.13□□□□□ -1.11
NPHP3-208ENST00000490993 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.13□□□□□ -1.11
NPHP3-208ENST00000490993 ARMCX3Q9UH62 379 aaPredicted RBP8.13□□□□□ -1.11
NPHP3-208ENST00000490993 V9GYY5 206 aaPredicted RBP8.13□□□□□ -1.11
NPHP3-208ENST00000490993 F5H6K3 240 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 RAD17O75943 681 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 TM4SF1P30408 202 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 MAGEA1P43355 309 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 ZBED6P86452 979 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 KLRC3Q07444 240 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 ADAM9Q13443 819 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 QRICH1Q2TAL8 776 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 CRY2Q49AN0 593 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 OTUD6AQ7L8S5 288 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 COL23A1Q86Y22 540 aaPredicted RBP8.12□□□□□ -1.11
NPHP3-208ENST00000490993 TEX2Q8IWB9 1127 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 KCTD17Q8N5Z5 321 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 TRIM58Q8NG06 486 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 ZDHHC15Q96MV8 337 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 C7orf25Q9BPX7 421 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 LIMA1Q9UHB6 759 aaKnown RBP8.12□□□□□ -1.11
NPHP3-208ENST00000490993 A0A1B0GTH6 734 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 LGALS16A8MUM7 142 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 PRCPP42785 496 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 PLS1Q14651 629 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 RRAGAQ7L523 313 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 POTEDQ86YR6 584 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 NACC1Q96RE7 527 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 PLVAPQ9BX97 442 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 PUF60Q9UHX1 559 aaKnown RBP8.12□□□□□ -1.11
NPHP3-208ENST00000490993 NUP188Q5SRE5 1749 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 ABCB11O95342 1321 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 ITIH6Q6UXX5 1313 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 A0A1W2PQC6 194 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 CPXCR1Q8N123 301 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 IFIH1Q9BYX4 1025 aaKnown RBP8.12□□□□□ -1.11
NPHP3-208ENST00000490993 CPVLQ9H3G5 476 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 FAM207AQ9NSI2 230 aaPredicted RBP8.12□□□□□ -1.11
NPHP3-208ENST00000490993 TMEM260Q9NX78 707 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 GDAQ9Y2T3 454 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 GAKO14976 1311 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 GOLGA6L10A0A0M3HER8 536 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 MACROD2A1Z1Q3 448 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 TBX3O15119 743 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 N4BP1O75113 896 aaKnown RBP8.12□□□□□ -1.11
NPHP3-208ENST00000490993 RHOBTB3O94955 611 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 DESP17661 470 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 USP8P40818 1118 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 MMP14P50281 582 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 ELF2Q15723 593 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 IFT74Q96LB3 600 aa8.12□□□□□ -1.11
NPHP3-208ENST00000490993 LSM14BQ9BX40 385 aaKnown RBP8.12□□□□□ -1.11
NPHP3-208ENST00000490993 H0YCG3 227 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 FLOT1O75955 427 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 MYCLP12524 364 aaPredicted RBP8.11□□□□□ -1.11
NPHP3-208ENST00000490993 FXR2P51116 673 aaKnown RBP eCLIP8.11□□□□□ -1.11
NPHP3-208ENST00000490993 ARID5AQ03989 594 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 KLHL30Q0D2K2 578 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 NT5DC1Q5TFE4 455 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 SPICE1Q8N0Z3 855 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 VTI1AQ96AJ9 217 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 ZNF577Q9BSK1 485 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 DESI2Q9BSY9 194 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 MRIQ9BWK5 157 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 BZW2Q9Y6E2 419 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms