RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 BECN2A8MW95 431 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 TMEM232C9JQI7 657 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 FOSP01100 380 aaPredicted RBP11.62□□□□□ -0.55
HDAC3-210ENST00000490808 SLURP2P0DP57 97 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 GCFC2P16383 781 aaKnown RBP11.62□□□□□ -0.55
HDAC3-210ENST00000490808 ZNF165P49910 485 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 STAT2P52630 851 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 JAG1P78504 1218 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 TMEM266Q2M3C6 531 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 SYDE2Q5VT97 1194 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 GPAT2Q6NUI2 795 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 FBXO11Q86XK2 927 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 RNF214Q8ND24 703 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 AK8Q96MA6 479 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 CLIC6Q96NY7 704 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 PPP1R9BQ96SB3 815 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 CSRNP2Q9H175 543 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 PSTPIP2Q9H939 334 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 EHMT1Q9H9B1 1298 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 EMILIN3Q9NT22 766 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 CCDC39Q9UFE4 941 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 PCDHA1Q9Y5I3 950 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 PARP14Q460N5 1801 aa11.62□□□□□ -0.55
HDAC3-210ENST00000490808 VWA3AA6NCI4 1184 aa11.61□□□□□ -0.55
HDAC3-210ENST00000490808 NDUFB10O96000 172 aa11.61□□□□□ -0.55
HDAC3-210ENST00000490808 VCAM1P19320 739 aa11.61□□□□□ -0.55
HDAC3-210ENST00000490808 AP3B2Q13367 1082 aa11.61□□□□□ -0.55
HDAC3-210ENST00000490808 CDC37Q16543 378 aaPredicted RBP11.61□□□□□ -0.55
HDAC3-210ENST00000490808 FAM110CQ1W6H9 321 aa11.61□□□□□ -0.55
HDAC3-210ENST00000490808 INF2Q27J81 1249 aa11.61□□□□□ -0.55
HDAC3-210ENST00000490808 ANO6Q4KMQ2 910 aa11.61□□□□□ -0.55
HDAC3-210ENST00000490808 CATSPERGQ6ZRH7 1159 aa11.61□□□□□ -0.55
HDAC3-210ENST00000490808 CLEC10AQ8IUN9 316 aa11.61□□□□□ -0.55
HDAC3-210ENST00000490808 FAM43AQ8N2R8 423 aa11.61□□□□□ -0.55
HDAC3-210ENST00000490808 TRIML1Q8N9V2 468 aa11.61□□□□□ -0.55
HDAC3-210ENST00000490808 IQUBQ8NA54 791 aa11.61□□□□□ -0.55
HDAC3-210ENST00000490808 ACER1Q8TDN7 264 aa11.61□□□□□ -0.55
HDAC3-210ENST00000490808 SMCR8Q8TEV9 937 aaPredicted RBP11.61□□□□□ -0.55
HDAC3-210ENST00000490808 COA7Q96BR5 231 aa11.61□□□□□ -0.55
HDAC3-210ENST00000490808 SHISA4Q96DD7 197 aa11.61□□□□□ -0.55
HDAC3-210ENST00000490808 ERO1AQ96HE7 468 aa11.61□□□□□ -0.55
HDAC3-210ENST00000490808 GTPBP4Q9BZE4 634 aaKnown RBP11.61□□□□□ -0.55
HDAC3-210ENST00000490808 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.61□□□□□ -0.55
HDAC3-210ENST00000490808 FEM1BQ9UK73 627 aa11.61□□□□□ -0.55
HDAC3-210ENST00000490808 MRVI1Q9Y6F6 885 aa11.61□□□□□ -0.55
HDAC3-210ENST00000490808 MGAMO43451 1857 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 A0A1W2PRG0 241 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 GOLGA6L6A8MZA4 724 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 POLR2DO15514 142 aaKnown RBP11.6□□□□□ -0.55
HDAC3-210ENST00000490808 NEMFO60524 1076 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 CCNT1O60563 726 aaKnown RBP11.6□□□□□ -0.55
HDAC3-210ENST00000490808 FKTNO75072 461 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 COPB2P35606 906 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 SLC16A2P36021 539 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 NLRP12P59046 1061 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 CCNA1P78396 465 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 SEMA3FQ13275 785 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 CRHR2Q13324 411 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 COG2Q14746 738 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 KIF22Q14807 665 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 SLC35G1Q2M3R5 365 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 QRICH1Q2TAL8 776 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 LETM2Q2VYF4 491 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 HS1BP3Q53T59 392 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 EARS2Q5JPH6 523 aaKnown RBP11.6□□□□□ -0.55
HDAC3-210ENST00000490808 CT47A1Q5JQC4 288 aaPredicted RBP11.6□□□□□ -0.55
HDAC3-210ENST00000490808 TTBK2Q6IQ55 1244 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 SIAH1Q8IUQ4 282 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 TBCKQ8TEA7 893 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 ZNF296Q8WUU4 475 aaPredicted RBP11.6□□□□□ -0.55
HDAC3-210ENST00000490808 ASCC2Q9H1I8 757 aaPredicted RBP11.6□□□□□ -0.55
HDAC3-210ENST00000490808 CPVLQ9H3G5 476 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 CUEDC2Q9H467 287 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 MAGEF1Q9HAY2 307 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 BIN2Q9UBW5 565 aaPredicted RBP11.6□□□□□ -0.55
HDAC3-210ENST00000490808 STK24Q9Y6E0 443 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 DOCK3Q8IZD9 2030 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 RLFQ13129 1914 aa11.6□□□□□ -0.55
HDAC3-210ENST00000490808 FAM205CA6NFA0 338 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 GPR25O00155 361 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 MARCH6O60337 910 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 TBC1D8O95759 1140 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 MYL1P05976 194 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 TPM3P06753 285 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 OR52Z1P0C646 297 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 SLFN14P0C7P3 912 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 UBA7P41226 1012 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 USP11P51784 963 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 PRMT2P55345 433 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 SP3Q02447 781 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 POSTNQ15063 836 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 JAKMIP3Q5VZ66 844 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 PPP4R3AQ6IN85 833 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 TYW1BQ6NUM6 668 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 C17orf99Q6UX52 265 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 SAMD3Q8N6K7 520 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 PRPF38AQ8NAV1 312 aaKnown RBP11.59□□□□□ -0.55
HDAC3-210ENST00000490808 RASSF8Q8NHQ8 419 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 SMARCE1Q969G3 411 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 CCDC47Q96A33 483 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms