RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 NUP88Q99567 741 aaPredicted RBP10.82□□□□□ -0.68
SRRM1-217ENST00000490543 NKX2-4Q9H2Z4 354 aa10.82□□□□□ -0.68
SRRM1-217ENST00000490543 SH2D4AQ9H788 454 aa10.82□□□□□ -0.68
SRRM1-217ENST00000490543 YBX2Q9Y2T7 364 aaKnown RBP10.82□□□□□ -0.68
SRRM1-217ENST00000490543 TCF20Q9UGU0 1960 aaKnown RBP10.82□□□□□ -0.68
SRRM1-217ENST00000490543 ELP1O95163 1332 aa10.82□□□□□ -0.68
SRRM1-217ENST00000490543 DNAJC25-GNG10A0A024R161 153 aa10.81□□□□□ -0.68
SRRM1-217ENST00000490543 USP17L12C9JPN9 530 aa10.81□□□□□ -0.68
SRRM1-217ENST00000490543 USP17L21D6R901 530 aa10.81□□□□□ -0.68
SRRM1-217ENST00000490543 ARVCFO00192 962 aa10.81□□□□□ -0.68
SRRM1-217ENST00000490543 CTAGE5O15320 804 aa10.81□□□□□ -0.68
SRRM1-217ENST00000490543 MBD4O95243 580 aa10.81□□□□□ -0.68
SRRM1-217ENST00000490543 CST5P28325 142 aaPredicted RBP10.81□□□□□ -0.68
SRRM1-217ENST00000490543 PLA2G5P39877 138 aa10.81□□□□□ -0.68
SRRM1-217ENST00000490543 NNTQ13423 1086 aa10.81□□□□□ -0.68
SRRM1-217ENST00000490543 ACVR2BQ13705 512 aa10.81□□□□□ -0.68
SRRM1-217ENST00000490543 TTF1Q15361 905 aaPredicted RBP10.81□□□□□ -0.68
SRRM1-217ENST00000490543 CEP85Q6P2H3 762 aa10.81□□□□□ -0.68
SRRM1-217ENST00000490543 MAMDC4Q6UXC1 1216 aa10.81□□□□□ -0.68
SRRM1-217ENST00000490543 FAM126BQ8IXS8 530 aa10.81□□□□□ -0.68
SRRM1-217ENST00000490543 TMEM199Q8N511 208 aa10.81□□□□□ -0.68
SRRM1-217ENST00000490543 DDX11Q96FC9 970 aa10.81□□□□□ -0.68
SRRM1-217ENST00000490543 CCDC17Q96LX7 622 aa10.81□□□□□ -0.68
SRRM1-217ENST00000490543 FGD4Q96M96 766 aa10.81□□□□□ -0.68
SRRM1-217ENST00000490543 CDK15Q96Q40 435 aa10.81□□□□□ -0.68
SRRM1-217ENST00000490543 DNAJC2Q99543 621 aaKnown RBP10.81□□□□□ -0.68
SRRM1-217ENST00000490543 KANSL2Q9H9L4 492 aa10.81□□□□□ -0.68
SRRM1-217ENST00000490543 BAZ2AQ9UIF9 1905 aaKnown RBP10.81□□□□□ -0.68
SRRM1-217ENST00000490543 UMODL1Q5DID0 1318 aa10.81□□□□□ -0.68
SRRM1-217ENST00000490543 SYNGAP1Q96PV0 1343 aa10.81□□□□□ -0.68
SRRM1-217ENST00000490543 MCM3APO60318 1980 aa10.8□□□□□ -0.68
SRRM1-217ENST00000490543 CAPN5O15484 640 aaPredicted RBP10.8□□□□□ -0.68
SRRM1-217ENST00000490543 BMP1P13497 986 aa10.8□□□□□ -0.68
SRRM1-217ENST00000490543 GJA9P57773 515 aa10.8□□□□□ -0.68
SRRM1-217ENST00000490543 TFF2Q03403 129 aa10.8□□□□□ -0.68
SRRM1-217ENST00000490543 CCDC144BQ3MJ40 725 aa10.8□□□□□ -0.68
SRRM1-217ENST00000490543 GNASQ5JWF2 1037 aa10.8□□□□□ -0.68
SRRM1-217ENST00000490543 SNRNP48Q6IEG0 339 aaKnown RBP10.8□□□□□ -0.68
SRRM1-217ENST00000490543 PSRC1Q6PGN9 363 aaPredicted RBP10.8□□□□□ -0.68
SRRM1-217ENST00000490543 CCDC174Q6PII3 467 aa10.8□□□□□ -0.68
SRRM1-217ENST00000490543 C16orf86Q6ZW13 317 aa10.8□□□□□ -0.68
SRRM1-217ENST00000490543 ITPRIPQ8IWB1 547 aa10.8□□□□□ -0.68
SRRM1-217ENST00000490543 MSL3Q8N5Y2 521 aaKnown RBP10.8□□□□□ -0.68
SRRM1-217ENST00000490543 PCSK9Q8NBP7 692 aaKnown RBP10.8□□□□□ -0.68
SRRM1-217ENST00000490543 RHPN1Q8TCX5 695 aa10.8□□□□□ -0.68
SRRM1-217ENST00000490543 HERVK_113Q902F9 699 aa10.8□□□□□ -0.68
SRRM1-217ENST00000490543 TEX13BQ9BXU2 312 aa10.8□□□□□ -0.68
SRRM1-217ENST00000490543 BCL11AQ9H165 835 aa10.8□□□□□ -0.68
SRRM1-217ENST00000490543 IL23AQ9NPF7 189 aa10.8□□□□□ -0.68
SRRM1-217ENST00000490543 ATP8A2Q9NTI2 1148 aa10.8□□□□□ -0.68
SRRM1-217ENST00000490543 CHD7Q9P2D1 2997 aa10.8□□□□□ -0.68
SRRM1-217ENST00000490543 MSRAQ9UJ68 235 aa10.8□□□□□ -0.68
SRRM1-217ENST00000490543 MROH7Q68CQ1 1323 aa10.8□□□□□ -0.68
SRRM1-217ENST00000490543 MYH8P13535 1937 aa10.8□□□□□ -0.68
SRRM1-217ENST00000490543 PRRC2BQ5JSZ5 2229 aaKnown RBP10.79□□□□□ -0.68
SRRM1-217ENST00000490543 A0A0U1RQG5 324 aaPredicted RBP10.79□□□□□ -0.68
SRRM1-217ENST00000490543 APBB1O00213 710 aa10.79□□□□□ -0.68
SRRM1-217ENST00000490543 ADH1CP00326 375 aa10.79□□□□□ -0.68
SRRM1-217ENST00000490543 CD4P01730 458 aa10.79□□□□□ -0.68
SRRM1-217ENST00000490543 MYOGP15173 224 aa10.79□□□□□ -0.68
SRRM1-217ENST00000490543 PTGS1P23219 599 aa10.79□□□□□ -0.68
SRRM1-217ENST00000490543 COPB2P35606 906 aa10.79□□□□□ -0.68
SRRM1-217ENST00000490543 RABGGTBP53611 331 aa10.79□□□□□ -0.68
SRRM1-217ENST00000490543 BEX3Q00994 111 aa10.79□□□□□ -0.68
SRRM1-217ENST00000490543 ARID5BQ14865 1188 aa10.79□□□□□ -0.68
SRRM1-217ENST00000490543 RAB30Q15771 203 aa10.79□□□□□ -0.68
SRRM1-217ENST00000490543 OTOP2Q7RTS6 562 aa10.79□□□□□ -0.68
SRRM1-217ENST00000490543 CPXCR1Q8N123 301 aa10.79□□□□□ -0.68
SRRM1-217ENST00000490543 FAM122AQ96E09 287 aa10.79□□□□□ -0.68
SRRM1-217ENST00000490543 SLF1Q9BQI6 1058 aa10.79□□□□□ -0.68
SRRM1-217ENST00000490543 UPF3AQ9H1J1 476 aaKnown RBP10.79□□□□□ -0.68
SRRM1-217ENST00000490543 SLC28A3Q9HAS3 691 aa10.79□□□□□ -0.68
SRRM1-217ENST00000490543 GOPCQ9HD26 462 aa10.79□□□□□ -0.68
SRRM1-217ENST00000490543 AP1G2O75843 785 aa10.78□□□□□ -0.68
SRRM1-217ENST00000490543 FGBP02675 491 aa10.78□□□□□ -0.68
SRRM1-217ENST00000490543 SNRPBP14678 240 aaKnown RBP10.78□□□□□ -0.68
SRRM1-217ENST00000490543 ADD2P35612 726 aa10.78□□□□□ -0.68
SRRM1-217ENST00000490543 KCNQ1P51787 676 aa10.78□□□□□ -0.68
SRRM1-217ENST00000490543 CCL23P55773 120 aa10.78□□□□□ -0.68
SRRM1-217ENST00000490543 CTR9Q6PD62 1173 aa10.78□□□□□ -0.68
SRRM1-217ENST00000490543 CXCL17Q6UXB2 119 aa10.78□□□□□ -0.68
SRRM1-217ENST00000490543 ARMCX2Q7L311 632 aa10.78□□□□□ -0.68
SRRM1-217ENST00000490543 ERC1Q8IUD2 1116 aa10.78□□□□□ -0.68
SRRM1-217ENST00000490543 STK11IPQ8N1F8 1099 aa10.78□□□□□ -0.68
SRRM1-217ENST00000490543 MICALL1Q8N3F8 863 aa10.78□□□□□ -0.68
SRRM1-217ENST00000490543 VWCEQ96DN2 955 aa10.78□□□□□ -0.68
SRRM1-217ENST00000490543 C1QTNF2Q9BXJ5 285 aa10.78□□□□□ -0.68
SRRM1-217ENST00000490543 KATNBL1Q9H079 304 aa10.78□□□□□ -0.68
SRRM1-217ENST00000490543 ABHD16BQ9H3Z7 469 aa10.78□□□□□ -0.68
SRRM1-217ENST00000490543 SENP2Q9HC62 589 aa10.78□□□□□ -0.68
SRRM1-217ENST00000490543 RAVER2Q9HCJ3 691 aaKnown RBP10.78□□□□□ -0.68
SRRM1-217ENST00000490543 DDX49Q9Y6V7 483 aaKnown RBP10.78□□□□□ -0.68
SRRM1-217ENST00000490543 GBF1Q92538 1859 aa10.78□□□□□ -0.68
SRRM1-217ENST00000490543 ASTN1O14525 1302 aa10.78□□□□□ -0.68
SRRM1-217ENST00000490543 GRIN2DO15399 1336 aa10.78□□□□□ -0.68
SRRM1-217ENST00000490543 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.77□□□□□ -0.69
SRRM1-217ENST00000490543 F5H6K3 240 aa10.77□□□□□ -0.69
SRRM1-217ENST00000490543 TLR3O15455 904 aaKnown RBP10.77□□□□□ -0.69
SRRM1-217ENST00000490543 NDUFB10O96000 172 aa10.77□□□□□ -0.69
SRRM1-217ENST00000490543 CNTN2Q02246 1040 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms