RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 SLC27A2O14975 620 aa12.03□□□□□ -0.48
RBM39-236ENST00000490484 TIMP1P01033 207 aa12.03□□□□□ -0.48
RBM39-236ENST00000490484 MYL3P08590 195 aa12.03□□□□□ -0.48
RBM39-236ENST00000490484 TXNP10599 105 aaKnown RBP12.03□□□□□ -0.48
RBM39-236ENST00000490484 EIF2AK2P19525 551 aaKnown RBP12.03□□□□□ -0.48
RBM39-236ENST00000490484 TROAPQ12815 778 aa12.03□□□□□ -0.48
RBM39-236ENST00000490484 ARHGEF16Q5VV41 709 aa12.03□□□□□ -0.48
RBM39-236ENST00000490484 CASC1Q6TDU7 716 aa12.03□□□□□ -0.48
RBM39-236ENST00000490484 SEPT14Q6ZU15 432 aa12.03□□□□□ -0.48
RBM39-236ENST00000490484 COPS5Q92905 334 aa12.03□□□□□ -0.48
RBM39-236ENST00000490484 MTMR8Q96EF0 704 aa12.03□□□□□ -0.48
RBM39-236ENST00000490484 PIGSQ96S52 555 aa12.03□□□□□ -0.48
RBM39-236ENST00000490484 LY9Q9HBG7 655 aa12.03□□□□□ -0.48
RBM39-236ENST00000490484 GPHNQ9NQX3 736 aaPredicted RBP12.03□□□□□ -0.48
RBM39-236ENST00000490484 PCDHA1Q9Y5I3 950 aa12.03□□□□□ -0.48
RBM39-236ENST00000490484 GRIN2DO15399 1336 aa12.03□□□□□ -0.48
RBM39-236ENST00000490484 NKRFO15226 690 aaKnown RBP eCLIP12.02□□□□□ -0.49
RBM39-236ENST00000490484 PRC1O43663 620 aa12.02□□□□□ -0.49
RBM39-236ENST00000490484 CYTH3O43739 400 aa12.02□□□□□ -0.49
RBM39-236ENST00000490484 B4GALT4O60513 344 aa12.02□□□□□ -0.49
RBM39-236ENST00000490484 HOXA13P31271 388 aaPredicted RBP12.02□□□□□ -0.49
RBM39-236ENST00000490484 HSD17B4P51659 736 aa12.02□□□□□ -0.49
RBM39-236ENST00000490484 PURAQ00577 322 aaKnown RBP12.02□□□□□ -0.49
RBM39-236ENST00000490484 COL9A3Q14050 684 aaPredicted RBP12.02□□□□□ -0.49
RBM39-236ENST00000490484 TTLL4Q14679 1199 aa12.02□□□□□ -0.49
RBM39-236ENST00000490484 CREB3L3Q68CJ9 461 aa12.02□□□□□ -0.49
RBM39-236ENST00000490484 ZNF654Q8IZM8 581 aa12.02□□□□□ -0.49
RBM39-236ENST00000490484 SLC43A3Q8NBI5 491 aa12.02□□□□□ -0.49
RBM39-236ENST00000490484 IGDCC4Q8TDY8 1250 aa12.02□□□□□ -0.49
RBM39-236ENST00000490484 PIBF1Q8WXW3 757 aa12.02□□□□□ -0.49
RBM39-236ENST00000490484 MAF1Q9H063 256 aa12.02□□□□□ -0.49
RBM39-236ENST00000490484 RIOX1Q9H6W3 641 aa12.02□□□□□ -0.49
RBM39-236ENST00000490484 PXMP2Q9NR77 195 aa12.02□□□□□ -0.49
RBM39-236ENST00000490484 POLR3EQ9NVU0 708 aa12.02□□□□□ -0.49
RBM39-236ENST00000490484 EYSQ5T1H1 3165 aa12.02□□□□□ -0.49
RBM39-236ENST00000490484 BAZ2BQ9UIF8 2168 aaKnown RBP12.01□□□□□ -0.49
RBM39-236ENST00000490484 SH2B2O14492 632 aaPredicted RBP12.01□□□□□ -0.49
RBM39-236ENST00000490484 DDAH1O94760 285 aa12.01□□□□□ -0.49
RBM39-236ENST00000490484 CD4P01730 458 aa12.01□□□□□ -0.49
RBM39-236ENST00000490484 CSF2RAP15509 400 aa12.01□□□□□ -0.49
RBM39-236ENST00000490484 RXRAP19793 462 aa12.01□□□□□ -0.49
RBM39-236ENST00000490484 MCM5P33992 734 aa12.01□□□□□ -0.49
RBM39-236ENST00000490484 STXBP2Q15833 593 aa12.01□□□□□ -0.49
RBM39-236ENST00000490484 BRDTQ58F21 947 aaPredicted RBP12.01□□□□□ -0.49
RBM39-236ENST00000490484 MFSD5Q6N075 450 aa12.01□□□□□ -0.49
RBM39-236ENST00000490484 NFXL1Q6ZNB6 911 aa12.01□□□□□ -0.49
RBM39-236ENST00000490484 CTCFLQ8NI51 663 aaPredicted RBP12.01□□□□□ -0.49
RBM39-236ENST00000490484 FAM161BQ96MY7 647 aa12.01□□□□□ -0.49
RBM39-236ENST00000490484 IWS1Q96ST2 819 aa12.01□□□□□ -0.49
RBM39-236ENST00000490484 MTG1Q9BT17 334 aaPredicted RBP12.01□□□□□ -0.49
RBM39-236ENST00000490484 TRPV6Q9H1D0 765 aa12.01□□□□□ -0.49
RBM39-236ENST00000490484 HIPK3Q9H422 1215 aa12.01□□□□□ -0.49
RBM39-236ENST00000490484 UMODL1Q5DID0 1318 aa12.01□□□□□ -0.49
RBM39-236ENST00000490484 KIAA1217Q5T5P2 1943 aa12.01□□□□□ -0.49
RBM39-236ENST00000490484 CCDC69A6NI79 296 aa12□□□□□ -0.49
RBM39-236ENST00000490484 CYP2C18P33260 490 aa12□□□□□ -0.49
RBM39-236ENST00000490484 CHMP4BP1P59074 171 aa12□□□□□ -0.49
RBM39-236ENST00000490484 GHRHRQ02643 423 aa12□□□□□ -0.49
RBM39-236ENST00000490484 PPIGQ13427 754 aaKnown RBP eCLIP12□□□□□ -0.493e-24■□□□□ 11.1
RBM39-236ENST00000490484 NECTIN1Q15223 517 aa12□□□□□ -0.49
RBM39-236ENST00000490484 LY6KQ17RY6 165 aa12□□□□□ -0.49
RBM39-236ENST00000490484 FAM47CQ5HY64 1035 aa12□□□□□ -0.49
RBM39-236ENST00000490484 ZNF697Q5TEC3 545 aa12□□□□□ -0.49
RBM39-236ENST00000490484 CCDC62Q6P9F0 684 aa12□□□□□ -0.49
RBM39-236ENST00000490484 RAB11FIP4Q86YS3 637 aa12□□□□□ -0.49
RBM39-236ENST00000490484 TMEM199Q8N511 208 aa12□□□□□ -0.49
RBM39-236ENST00000490484 PPP1R13LQ8WUF5 828 aa12□□□□□ -0.49
RBM39-236ENST00000490484 CCDC136Q96JN2 1154 aa12□□□□□ -0.49
RBM39-236ENST00000490484 TMEM87BQ96K49 555 aa12□□□□□ -0.49
RBM39-236ENST00000490484 LRRC2Q9BYS8 371 aa12□□□□□ -0.49
RBM39-236ENST00000490484 ALDH8A1Q9H2A2 487 aaPredicted RBP12□□□□□ -0.49
RBM39-236ENST00000490484 TRMT13Q9NUP7 481 aaKnown RBP12□□□□□ -0.49
RBM39-236ENST00000490484 MRVI1Q9Y6F6 885 aa12□□□□□ -0.49
RBM39-236ENST00000490484 SCN10AQ9Y5Y9 1956 aa11.99□□□□□ -0.49
RBM39-236ENST00000490484 PNMA6FA0A0J9YX94 578 aa11.99□□□□□ -0.49
RBM39-236ENST00000490484 A6NJR5 290 aa11.99□□□□□ -0.49
RBM39-236ENST00000490484 GCOM1H8Y6P7 765 aaPredicted RBP11.99□□□□□ -0.49
RBM39-236ENST00000490484 CDC45O75419 566 aa11.99□□□□□ -0.49
RBM39-236ENST00000490484 PLEKHA8P1O95397 391 aa11.99□□□□□ -0.49
RBM39-236ENST00000490484 GH1P01241 217 aa11.99□□□□□ -0.49
RBM39-236ENST00000490484 NR3C2P08235 984 aa11.99□□□□□ -0.49
RBM39-236ENST00000490484 MMP3P08254 477 aa11.99□□□□□ -0.49
RBM39-236ENST00000490484 POLR2MP0CAP2 368 aa11.99□□□□□ -0.49
RBM39-236ENST00000490484 ACRP10323 421 aa11.99□□□□□ -0.49
RBM39-236ENST00000490484 MYCLP12524 364 aaPredicted RBP11.99□□□□□ -0.49
RBM39-236ENST00000490484 KIF5BP33176 963 aa11.99□□□□□ -0.49
RBM39-236ENST00000490484 SMAD3P84022 425 aaKnown RBP11.99□□□□□ -0.49
RBM39-236ENST00000490484 ARHGAP1Q07960 439 aa11.99□□□□□ -0.49
RBM39-236ENST00000490484 TRAF1Q13077 416 aa11.99□□□□□ -0.49
RBM39-236ENST00000490484 RNF20Q5VTR2 975 aa11.99□□□□□ -0.49
RBM39-236ENST00000490484 FCHSD1Q86WN1 690 aa11.99□□□□□ -0.49
RBM39-236ENST00000490484 IL31RAQ8NI17 732 aa11.99□□□□□ -0.49
RBM39-236ENST00000490484 AFG1LQ8WV93 481 aa11.99□□□□□ -0.49
RBM39-236ENST00000490484 RRP36Q96EU6 259 aaKnown RBP11.99□□□□□ -0.49
RBM39-236ENST00000490484 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.99□□□□□ -0.497e-15■■■□□ 14.8
RBM39-236ENST00000490484 PDCD2LQ9BRP1 358 aa11.99□□□□□ -0.49
RBM39-236ENST00000490484 SEZ6LQ9BYH1 1024 aa11.99□□□□□ -0.49
RBM39-236ENST00000490484 MTMR10Q9NXD2 777 aa11.99□□□□□ -0.49
RBM39-236ENST00000490484 SEC63Q9UGP8 760 aaKnown RBP11.99□□□□□ -0.49
RBM39-236ENST00000490484 SORBS3O60504 671 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms