RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 DSCC1Q9BVC3 393 aa6.73□□□□□ -1.33
SSX2IP-208ENST00000490476 MTFR1LQ9H019 292 aa6.73□□□□□ -1.33
SSX2IP-208ENST00000490476 CGGBP1Q9UFW8 167 aaPredicted RBP6.73□□□□□ -1.33
SSX2IP-208ENST00000490476 NOP58Q9Y2X3 529 aaKnown RBP6.73□□□□□ -1.33
SSX2IP-208ENST00000490476 MYO5BQ9ULV0 1848 aa6.73□□□□□ -1.33
SSX2IP-208ENST00000490476 TOPAZ1Q8N9V7 1692 aa6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 KIF3BO15066 747 aa6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 DHX15O43143 795 aaKnown RBP6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 EOMESO95936 686 aa6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 PROCP04070 461 aa6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 MYCLP1P12525 358 aaPredicted RBP6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 YBX3P16989 372 aaKnown RBP eCLIP6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 CNGA1P29973 690 aa6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 KCNJ6P48051 423 aa6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 PABPC4Q13310 644 aaKnown RBP eCLIP6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 POMZP3Q6PJE2 187 aa6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 SEZ6L2Q6UXD5 910 aa6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 TMC3Q7Z5M5 1100 aa6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 SCUBE1Q8IWY4 988 aa6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 NIM1KQ8IY84 436 aa6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 DZIP1LQ8IYY4 767 aaKnown RBP6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 GIMAP7Q8NHV1 300 aa6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 KISS1RQ969F8 398 aaPredicted RBP6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 NCOA5Q9HCD5 579 aaKnown RBP6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 PRDM5Q9NQX1 630 aaPredicted RBP6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 PLAAQ9Y263 795 aa6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 EMC9Q9Y3B6 208 aa6.72□□□□□ -1.33
SSX2IP-208ENST00000490476 COL24A1Q17RW2 1714 aa6.71□□□□□ -1.34
SSX2IP-208ENST00000490476 NOS1P29475 1434 aa6.71□□□□□ -1.34
SSX2IP-208ENST00000490476 CCDC163A0A0D9SF12 145 aa6.71□□□□□ -1.34
SSX2IP-208ENST00000490476 FOXN1O15353 648 aa6.71□□□□□ -1.34
SSX2IP-208ENST00000490476 VAMP4O75379 141 aa6.71□□□□□ -1.34
SSX2IP-208ENST00000490476 SF1Q15637 639 aaKnown RBP6.71□□□□□ -1.34
SSX2IP-208ENST00000490476 DPY19L1Q2PZI1 675 aa6.71□□□□□ -1.34
SSX2IP-208ENST00000490476 SFRP5Q5T4F7 317 aa6.71□□□□□ -1.34
SSX2IP-208ENST00000490476 GTF2IRD2BQ6EKJ0 949 aa6.71□□□□□ -1.34
SSX2IP-208ENST00000490476 GTF2IRD2Q86UP8 949 aa6.71□□□□□ -1.34
SSX2IP-208ENST00000490476 TRIM59Q8IWR1 403 aa6.71□□□□□ -1.34
SSX2IP-208ENST00000490476 CRACR2BQ8N4Y2 399 aaPredicted RBP6.71□□□□□ -1.34
SSX2IP-208ENST00000490476 NINJ1Q92982 152 aa6.71□□□□□ -1.34
SSX2IP-208ENST00000490476 MFSD3Q96ES6 412 aa6.71□□□□□ -1.34
SSX2IP-208ENST00000490476 MRGPRX3Q96LB0 322 aa6.71□□□□□ -1.34
SSX2IP-208ENST00000490476 TBC1D32Q96NH3 1257 aa6.71□□□□□ -1.34
SSX2IP-208ENST00000490476 ASCC2Q9H1I8 757 aaPredicted RBP6.71□□□□□ -1.34
SSX2IP-208ENST00000490476 MINPP1Q9UNW1 487 aa6.71□□□□□ -1.34
SSX2IP-208ENST00000490476 FHOD1Q9Y613 1164 aa6.71□□□□□ -1.34
SSX2IP-208ENST00000490476 DHX29Q7Z478 1369 aaKnown RBP6.7□□□□□ -1.34
SSX2IP-208ENST00000490476 BLACEA4D250 179 aa6.7□□□□□ -1.34
SSX2IP-208ENST00000490476 ADAM23O75077 832 aa6.7□□□□□ -1.34
SSX2IP-208ENST00000490476 FGFR1P11362 822 aa6.7□□□□□ -1.34
SSX2IP-208ENST00000490476 SUMO1P63165 101 aaKnown RBP6.7□□□□□ -1.34
SSX2IP-208ENST00000490476 ARHGEF39Q8N4T4 335 aa6.7□□□□□ -1.34
SSX2IP-208ENST00000490476 FBXL6Q8N531 539 aa6.7□□□□□ -1.34
SSX2IP-208ENST00000490476 OSBP2Q969R2 916 aa6.7□□□□□ -1.34
SSX2IP-208ENST00000490476 RCC1LQ96I51 464 aaKnown RBP6.7□□□□□ -1.34
SSX2IP-208ENST00000490476 CLUHP3Q96NS8 147 aa6.7□□□□□ -1.34
SSX2IP-208ENST00000490476 KCNH3Q9ULD8 1083 aa6.7□□□□□ -1.34
SSX2IP-208ENST00000490476 DIS3Q9Y2L1 958 aaKnown RBP6.7□□□□□ -1.34
SSX2IP-208ENST00000490476 GPR55Q9Y2T6 319 aaPredicted RBP6.7□□□□□ -1.34
SSX2IP-208ENST00000490476 SBF2Q86WG5 1849 aa6.7□□□□□ -1.34
SSX2IP-208ENST00000490476 EHBP1L1Q8N3D4 1523 aa6.7□□□□□ -1.34
SSX2IP-208ENST00000490476 LRRIQ1Q96JM4 1722 aa6.7□□□□□ -1.34
SSX2IP-208ENST00000490476 FYCO1Q9BQS8 1478 aa6.69□□□□□ -1.34
SSX2IP-208ENST00000490476 HMX2A2RU54 273 aa6.69□□□□□ -1.34
SSX2IP-208ENST00000490476 PLD2O14939 933 aa6.69□□□□□ -1.34
SSX2IP-208ENST00000490476 SNRPB2P08579 225 aaKnown RBP6.69□□□□□ -1.34
SSX2IP-208ENST00000490476 ADMP35318 185 aa6.69□□□□□ -1.34
SSX2IP-208ENST00000490476 ECI1P42126 302 aa6.69□□□□□ -1.34
SSX2IP-208ENST00000490476 AMPD3Q01432 767 aa6.69□□□□□ -1.34
SSX2IP-208ENST00000490476 CNNM4Q6P4Q7 775 aa6.69□□□□□ -1.34
SSX2IP-208ENST00000490476 UBR7Q8N806 425 aa6.69□□□□□ -1.34
SSX2IP-208ENST00000490476 DTWD2Q8NBA8 298 aa6.69□□□□□ -1.34
SSX2IP-208ENST00000490476 SYTL5Q8TDW5 730 aaPredicted RBP6.69□□□□□ -1.34
SSX2IP-208ENST00000490476 CHST7Q9NS84 486 aa6.69□□□□□ -1.34
SSX2IP-208ENST00000490476 NDOR1Q9UHB4 597 aa6.69□□□□□ -1.34
SSX2IP-208ENST00000490476 SF3B6Q9Y3B4 125 aaKnown RBP6.69□□□□□ -1.34
SSX2IP-208ENST00000490476 XRN1Q8IZH2 1706 aaKnown RBP6.69□□□□□ -1.34
SSX2IP-208ENST00000490476 ADGRL3Q9HAR2 1447 aa6.68□□□□□ -1.34
SSX2IP-208ENST00000490476 C1orf167Q5SNV9 1468 aa6.68□□□□□ -1.34
SSX2IP-208ENST00000490476 A0A087WZG4 1122 aa6.68□□□□□ -1.34
SSX2IP-208ENST00000490476 PRR33A8MZF0 331 aa6.68□□□□□ -1.34
SSX2IP-208ENST00000490476 H0Y8X5 98 aa6.68□□□□□ -1.34
SSX2IP-208ENST00000490476 DLX3O60479 287 aa6.68□□□□□ -1.34
SSX2IP-208ENST00000490476 RAB11FIP3O75154 756 aa6.68□□□□□ -1.34
SSX2IP-208ENST00000490476 PRAMEF1O95521 474 aa6.68□□□□□ -1.34
SSX2IP-208ENST00000490476 CHRNA4P43681 627 aa6.68□□□□□ -1.34
SSX2IP-208ENST00000490476 FSTL1Q12841 308 aa6.68□□□□□ -1.34
SSX2IP-208ENST00000490476 NMIQ13287 307 aaPredicted RBP6.68□□□□□ -1.34
SSX2IP-208ENST00000490476 CLEC16AQ2KHT3 1053 aa6.68□□□□□ -1.34
SSX2IP-208ENST00000490476 TM4SF20Q53R12 229 aa6.68□□□□□ -1.34
SSX2IP-208ENST00000490476 CT47A1Q5JQC4 288 aaPredicted RBP6.68□□□□□ -1.34
SSX2IP-208ENST00000490476 CLEC10AQ8IUN9 316 aa6.68□□□□□ -1.34
SSX2IP-208ENST00000490476 Q96M66 194 aa6.68□□□□□ -1.34
SSX2IP-208ENST00000490476 FAM83CQ9BQN1 747 aa6.68□□□□□ -1.34
SSX2IP-208ENST00000490476 BRINP2Q9C0B6 783 aa6.68□□□□□ -1.34
SSX2IP-208ENST00000490476 GTF2IRD1Q9UHL9 959 aa6.68□□□□□ -1.34
SSX2IP-208ENST00000490476 PRAG1Q86YV5 1406 aa6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 SIGLEC6O43699 453 aa6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 CTCFP49711 727 aaPredicted RBP6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 AMPD2Q01433 879 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms