RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 ELMO3Q96BJ8 720 aa4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 FOXQ1Q9C009 403 aa4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 XYLT2Q9H1B5 865 aa4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 COPRSQ9NQ92 184 aa4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 CHMP5Q9NZZ3 219 aa4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 CORINQ9Y5Q5 1042 aa4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 CAPN6Q9Y6Q1 641 aa4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 PKD1L3Q7Z443 1732 aa4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 CPSF1Q10570 1443 aaKnown RBP4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 TUBGCP6Q96RT7 1819 aa4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 SPEF2Q9C093 1822 aa4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 KDM3BQ7LBC6 1761 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 EVC2Q86UK5 1308 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 SORBS3O60504 671 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 PF4P02776 101 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 SRFP11831 508 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 PTMSP20962 102 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 RGS3P49796 1198 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 EFEMP1Q12805 493 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 CAMK2GQ13555 558 aaPredicted RBP4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 TSNAXIP1Q2TAA8 658 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 TMEM201Q5SNT2 666 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 CLEC17AQ6ZS10 378 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 HID1Q8IV36 788 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 KCT2Q8NC54 265 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 GATAD2BQ8WXI9 593 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 LTV1Q96GA3 475 aaPredicted RBP4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 Q96M66 194 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 TMEM74Q96NL1 305 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 PPP1R9BQ96SB3 815 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 LRRC3Q9BY71 257 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 PANK2Q9BZ23 570 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 PDCL3Q9H2J4 239 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 GRPEL1Q9HAV7 217 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 C19orf73Q9NVV2 129 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 ADAM30Q9UKF2 790 aa4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 RRP7AQ9Y3A4 280 aaKnown RBP4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 POLR3AO14802 1390 aaPredicted RBP4.27□□□□□ -1.73
CRNKL1-203ENST00000490258 AFDNP55196 1824 aaKnown RBP4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 GREM1O60565 184 aa4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 ITIH2P19823 946 aa4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 CRKP46108 304 aa4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 CLCN7P51798 805 aa4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 WDR43Q15061 677 aaKnown RBP eCLIP4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 CHRNA2Q15822 529 aa4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 HS1BP3Q53T59 392 aa4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 TCERG1LQ5VWI1 586 aa4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 MCATQ8IVS2 390 aaKnown RBP4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 SMC5Q8IY18 1101 aa4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 MFSD2AQ8NA29 543 aa4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 FBXO27Q8NI29 283 aa4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 SNX21Q969T3 373 aa4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 TMEM87BQ96K49 555 aa4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 NAP1L5Q96NT1 182 aaPredicted RBP4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 MAP7D2Q96T17 732 aa4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 DPH2Q9BQC3 489 aaPredicted RBP4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 MIR1-1HGQ9H1L0 117 aa4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 TNS3Q68CZ2 1445 aa4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 EDC4Q6P2E9 1401 aaKnown RBP4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 SSH2Q76I76 1423 aa4.26□□□□□ -1.73
CRNKL1-203ENST00000490258 CDK12Q9NYV4 1490 aaPredicted RBP4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 PAPPAQ13219 1627 aa4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 LAMB4A4D0S4 1761 aa4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 COL14A1Q05707 1796 aaKnown RBP4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 KAT6BQ8WYB5 2073 aa4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 OFD1O75665 1012 aa4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 HMOX1P09601 288 aa4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 RLBP1P12271 317 aa4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 ZNF16P17020 682 aaPredicted RBP4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 CACNA1SQ13698 1873 aa4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 LETMD1Q6P1Q0 360 aa4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 FAM196AQ6ZSG2 479 aa4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 ANKARQ7Z5J8 1434 aa4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 BAHD1Q8TBE0 780 aaPredicted RBP4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 VWCEQ96DN2 955 aa4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 MIPEPQ99797 713 aa4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 CHMP4AQ9BY43 222 aa4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 SLKQ9H2G2 1235 aaPredicted RBP4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 UPF2Q9HAU5 1272 aaKnown RBP4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 PRDM5Q9NQX1 630 aaPredicted RBP4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 KBTBD4Q9NVX7 518 aa4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 ADAMTS1Q9UHI8 967 aa4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 PRDM4Q9UKN5 801 aa4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 TBX22Q9Y458 520 aa4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 SBF2Q86WG5 1849 aa4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 MEGF6O75095 1541 aa4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 MSH6P52701 1360 aa4.25□□□□□ -1.73
CRNKL1-203ENST00000490258 TTC21BQ7Z4L5 1316 aa4.24□□□□□ -1.73
CRNKL1-203ENST00000490258 TJP1Q07157 1748 aa4.24□□□□□ -1.73
CRNKL1-203ENST00000490258 OTOL1A6NHN0 477 aaPredicted RBP4.24□□□□□ -1.73
CRNKL1-203ENST00000490258 UPK3BL1B0FP48 263 aa4.24□□□□□ -1.73
CRNKL1-203ENST00000490258 UPK3BL2E5RIL1 263 aa4.24□□□□□ -1.73
CRNKL1-203ENST00000490258 BCAR3O75815 825 aa4.24□□□□□ -1.73
CRNKL1-203ENST00000490258 SASH1O94885 1247 aa4.24□□□□□ -1.73
CRNKL1-203ENST00000490258 CT47B1P0C2W7 299 aaPredicted RBP4.24□□□□□ -1.73
CRNKL1-203ENST00000490258 GDNFP39905 211 aa4.24□□□□□ -1.73
CRNKL1-203ENST00000490258 ETF1P62495 437 aaKnown RBP4.24□□□□□ -1.73
CRNKL1-203ENST00000490258 CCDC173Q0VFZ6 552 aa4.24□□□□□ -1.73
CRNKL1-203ENST00000490258 HDAC1Q13547 482 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms