RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 DHTKD1Q96HY7 919 aaPredicted RBP29.68■■■□□ 2.34
KCNC4-207ENST00000489935 CDK5RAP3Q96JB5 506 aa29.68■■■□□ 2.34
KCNC4-207ENST00000489935 PANX2Q96RD6 677 aa29.68■■■□□ 2.34
KCNC4-207ENST00000489935 CCP110O43303 1012 aa29.67■■■□□ 2.34
KCNC4-207ENST00000489935 ECE1P42892 770 aa29.67■■■□□ 2.34
KCNC4-207ENST00000489935 IKQ13123 557 aaPredicted RBP29.67■■■□□ 2.34
KCNC4-207ENST00000489935 ECM1Q16610 540 aa29.67■■■□□ 2.34
KCNC4-207ENST00000489935 SPDYE2Q495Y8 402 aa29.67■■■□□ 2.34
KCNC4-207ENST00000489935 BTNL9Q6UXG8 535 aa29.67■■■□□ 2.34
KCNC4-207ENST00000489935 KCNK18Q7Z418 384 aa29.67■■■□□ 2.34
KCNC4-207ENST00000489935 FBXO11Q86XK2 927 aa29.67■■■□□ 2.34
KCNC4-207ENST00000489935 SPICE1Q8N0Z3 855 aa29.67■■■□□ 2.34
KCNC4-207ENST00000489935 LARP4BQ92615 738 aaKnown RBP29.67■■■□□ 2.34
KCNC4-207ENST00000489935 CCDC47Q96A33 483 aaKnown RBP29.67■■■□□ 2.34
KCNC4-207ENST00000489935 USP11P51784 963 aa29.66■■■□□ 2.34
KCNC4-207ENST00000489935 SF3B2Q13435 895 aaKnown RBP29.66■■■□□ 2.34
KCNC4-207ENST00000489935 USH1GQ495M9 461 aa29.66■■■□□ 2.34
KCNC4-207ENST00000489935 TMEM119Q4V9L6 283 aa29.66■■■□□ 2.34
KCNC4-207ENST00000489935 ANKRD20A12PQ8NF67 263 aa29.66■■■□□ 2.34
KCNC4-207ENST00000489935 RAD54LQ92698 747 aa29.66■■■□□ 2.34
KCNC4-207ENST00000489935 HPS3Q969F9 1004 aa29.66■■■□□ 2.34
KCNC4-207ENST00000489935 UIMC1Q96RL1 719 aa29.66■■■□□ 2.34
KCNC4-207ENST00000489935 DUSP9Q99956 384 aaKnown RBP29.66■■■□□ 2.34
KCNC4-207ENST00000489935 SRRTQ9BXP5 876 aaKnown RBP29.66■■■□□ 2.34
KCNC4-207ENST00000489935 ITIH6Q6UXX5 1313 aa29.66■■■□□ 2.34
KCNC4-207ENST00000489935 SMCHD1A6NHR9 2005 aa29.66■■■□□ 2.34
KCNC4-207ENST00000489935 TAL1P17542 331 aaPredicted RBP29.66■■■□□ 2.34
KCNC4-207ENST00000489935 KIAA1755Q5JYT7 1200 aa29.66■■■□□ 2.34
KCNC4-207ENST00000489935 ZNF710Q8N1W2 664 aa29.66■■■□□ 2.34
KCNC4-207ENST00000489935 THAP9Q9H5L6 903 aa29.66■■■□□ 2.34
KCNC4-207ENST00000489935 PCDHA12Q9UN75 941 aa29.66■■■□□ 2.34
KCNC4-207ENST00000489935 PPP2R2CQ9Y2T4 447 aa29.66■■■□□ 2.34
KCNC4-207ENST00000489935 GYPCP04921 128 aa29.65■■■□□ 2.34
KCNC4-207ENST00000489935 SYT10Q6XYQ8 523 aa29.65■■■□□ 2.34
KCNC4-207ENST00000489935 TOGARAM2Q6ZUX3 1019 aa29.65■■■□□ 2.34
KCNC4-207ENST00000489935 CDAN1Q8IWY9 1227 aa29.65■■■□□ 2.34
KCNC4-207ENST00000489935 ACER1Q8TDN7 264 aa29.65■■■□□ 2.34
KCNC4-207ENST00000489935 TRIM47Q96LD4 638 aa29.65■■■□□ 2.34
KCNC4-207ENST00000489935 NAP1L4Q99733 375 aaKnown RBP29.65■■■□□ 2.34
KCNC4-207ENST00000489935 KIF13BQ9NQT8 1826 aa29.65■■■□□ 2.34
KCNC4-207ENST00000489935 CYP3A7-CYP3A51PA0A087WV96 503 aa29.64■■■□□ 2.34
KCNC4-207ENST00000489935 MARCH6O60337 910 aa29.64■■■□□ 2.34
KCNC4-207ENST00000489935 CYP3A7P24462 503 aa29.64■■■□□ 2.34
KCNC4-207ENST00000489935 CASP14P31944 242 aa29.64■■■□□ 2.34
KCNC4-207ENST00000489935 KIAA0895Q8NCT3 520 aa29.64■■■□□ 2.34
KCNC4-207ENST00000489935 CRYGNQ8WXF5 182 aa29.64■■■□□ 2.34
KCNC4-207ENST00000489935 P2RX5Q93086 422 aa29.64■■■□□ 2.34
KCNC4-207ENST00000489935 ZNRF3Q9ULT6 936 aa29.64■■■□□ 2.34
KCNC4-207ENST00000489935 SLC16A10Q8TF71 515 aa29.64■■■□□ 2.34
KCNC4-207ENST00000489935 MBOAT7Q96N66 472 aa29.64■■■□□ 2.34
KCNC4-207ENST00000489935 VEZTQ9HBM0 779 aa29.64■■■□□ 2.34
KCNC4-207ENST00000489935 ZSCAN12O43309 604 aa29.63■■■□□ 2.33
KCNC4-207ENST00000489935 CCNE1P24864 410 aa29.63■■■□□ 2.33
KCNC4-207ENST00000489935 FXR1P51114 621 aaKnown RBP eCLIP29.63■■■□□ 2.33
KCNC4-207ENST00000489935 AP3B2Q13367 1082 aa29.63■■■□□ 2.33
KCNC4-207ENST00000489935 ANKRD40Q6AI12 368 aa29.63■■■□□ 2.33
KCNC4-207ENST00000489935 TRIM65Q6PJ69 517 aa29.63■■■□□ 2.33
KCNC4-207ENST00000489935 DYMQ7RTS9 669 aa29.63■■■□□ 2.33
KCNC4-207ENST00000489935 VPS33BQ9H267 617 aa29.63■■■□□ 2.33
KCNC4-207ENST00000489935 KCNMB3Q9NPA1 279 aa29.63■■■□□ 2.33
KCNC4-207ENST00000489935 PRR12Q9ULL5 1215 aa29.63■■■□□ 2.33
KCNC4-207ENST00000489935 SYNPO2Q9UMS6 1093 aa29.63■■■□□ 2.33
KCNC4-207ENST00000489935 MFAP3LO75121 409 aa29.63■■■□□ 2.33
KCNC4-207ENST00000489935 CNNM4Q6P4Q7 775 aa29.63■■■□□ 2.33
KCNC4-207ENST00000489935 OPLAHO14841 1288 aa29.62■■■□□ 2.33
KCNC4-207ENST00000489935 EEF1GP26641 437 aaKnown RBP29.62■■■□□ 2.33
KCNC4-207ENST00000489935 MMP14P50281 582 aa29.62■■■□□ 2.33
KCNC4-207ENST00000489935 MTF1Q14872 753 aa29.62■■■□□ 2.33
KCNC4-207ENST00000489935 COBLL1Q53SF7 1204 aa29.62■■■□□ 2.33
KCNC4-207ENST00000489935 UNC13DQ70J99 1090 aa29.62■■■□□ 2.33
KCNC4-207ENST00000489935 NIM1KQ8IY84 436 aa29.62■■■□□ 2.33
KCNC4-207ENST00000489935 TMEM39BQ9GZU3 492 aa29.62■■■□□ 2.33
KCNC4-207ENST00000489935 SLC39A2Q9NP94 309 aa29.62■■■□□ 2.33
KCNC4-207ENST00000489935 TMX2Q9Y320 296 aa29.62■■■□□ 2.33
KCNC4-207ENST00000489935 PVALEFA0A1B0GWK0 134 aa29.61■■■□□ 2.33
KCNC4-207ENST00000489935 GTPBP4Q9BZE4 634 aaKnown RBP29.61■■■□□ 2.33
KCNC4-207ENST00000489935 ARHGEF10LQ9HCE6 1279 aa29.61■■■□□ 2.33
KCNC4-207ENST00000489935 ZBTB21Q9ULJ3 1066 aa29.61■■■□□ 2.33
KCNC4-207ENST00000489935 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.61■■■□□ 2.33
KCNC4-207ENST00000489935 SOWAHDA6NJG2 315 aa29.61■■■□□ 2.33
KCNC4-207ENST00000489935 RNF225M0QZC1 329 aaPredicted RBP29.61■■■□□ 2.33
KCNC4-207ENST00000489935 ARHGAP4P98171 946 aa29.61■■■□□ 2.33
KCNC4-207ENST00000489935 UBXN1Q04323 297 aa29.61■■■□□ 2.33
KCNC4-207ENST00000489935 CSGALNACT2Q8N6G5 542 aa29.61■■■□□ 2.33
KCNC4-207ENST00000489935 MTMR14Q8NCE2 650 aa29.61■■■□□ 2.33
KCNC4-207ENST00000489935 AGBL3Q8NEM8 1001 aa29.61■■■□□ 2.33
KCNC4-207ENST00000489935 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.61■■■□□ 2.33
KCNC4-207ENST00000489935 TUBB4AP04350 444 aa29.6■■■□□ 2.33
KCNC4-207ENST00000489935 ETF1P62495 437 aaKnown RBP29.6■■■□□ 2.33
KCNC4-207ENST00000489935 CXCL9Q07325 125 aa29.6■■■□□ 2.33
KCNC4-207ENST00000489935 NOC3LQ8WTT2 800 aaKnown RBP29.6■■■□□ 2.33
KCNC4-207ENST00000489935 BICDL2A1A5D9 508 aa29.59■■■□□ 2.33
KCNC4-207ENST00000489935 HYIQ5T013 277 aa29.59■■■□□ 2.33
KCNC4-207ENST00000489935 FKBP1CQ5VVH2 108 aa29.59■■■□□ 2.33
KCNC4-207ENST00000489935 MOXD1Q6UVY6 613 aa29.59■■■□□ 2.33
KCNC4-207ENST00000489935 MIGA2Q7L4E1 593 aa29.59■■■□□ 2.33
KCNC4-207ENST00000489935 DDX12PQ92771 950 aa29.59■■■□□ 2.33
KCNC4-207ENST00000489935 EEF2KMTQ96G04 330 aa29.59■■■□□ 2.33
KCNC4-207ENST00000489935 PPP1R2P41236 205 aa29.59■■■□□ 2.33
KCNC4-207ENST00000489935 ZNF507Q8TCN5 953 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms