RNA–Protein interactions for RNA: ENST00000489637.3

MVB12B-206, Transcript of multivesicular body subunit 12B, humanhuman

TSL 1 (best) BASIC

Gene MVB12B, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12B-206ENST00000489637 PDE4DQ08499 809 aa17.04■□□□□ 0.32
MVB12B-206ENST00000489637 SPATA1Q5VX52 437 aa17.04■□□□□ 0.32
MVB12B-206ENST00000489637 VSTM4Q8IW00 320 aa17.04■□□□□ 0.32
MVB12B-206ENST00000489637 CPXCR1Q8N123 301 aa17.04■□□□□ 0.32
MVB12B-206ENST00000489637 CCAR2Q8N163 923 aaKnown RBP17.04■□□□□ 0.32
MVB12B-206ENST00000489637 CCDC34Q96HJ3 373 aa17.04■□□□□ 0.32
MVB12B-206ENST00000489637 ZNF341Q9BYN7 854 aa17.04■□□□□ 0.32
MVB12B-206ENST00000489637 CCSER1Q9C0I3 900 aa17.04■□□□□ 0.32
MVB12B-206ENST00000489637 HOMER2Q9NSB8 354 aa17.04■□□□□ 0.32
MVB12B-206ENST00000489637 BLOC1S4Q9NUP1 217 aa17.04■□□□□ 0.32
MVB12B-206ENST00000489637 MYMKA6NI61 221 aa17.04■□□□□ 0.32
MVB12B-206ENST00000489637 IGSF22Q8N9C0 903 aa17.04■□□□□ 0.32
MVB12B-206ENST00000489637 CDK5RAP3Q96JB5 506 aa17.04■□□□□ 0.32
MVB12B-206ENST00000489637 AMNQ9BXJ7 453 aa17.04■□□□□ 0.32
MVB12B-206ENST00000489637 KBTBD4Q9NVX7 518 aa17.04■□□□□ 0.32
MVB12B-206ENST00000489637 PKD2L1Q9P0L9 805 aa17.04■□□□□ 0.32
MVB12B-206ENST00000489637 DACH1Q9UI36 760 aa17.04■□□□□ 0.32
MVB12B-206ENST00000489637 CTIFO43310 598 aaKnown RBP17.03■□□□□ 0.32
MVB12B-206ENST00000489637 INPP5BP32019 993 aa17.03■□□□□ 0.32
MVB12B-206ENST00000489637 NBPF12Q5TAG4 269 aaPredicted RBP17.03■□□□□ 0.32
MVB12B-206ENST00000489637 APTXQ7Z2E3 356 aaKnown RBP17.03■□□□□ 0.32
MVB12B-206ENST00000489637 FEZ1Q99689 392 aa17.03■□□□□ 0.32
MVB12B-206ENST00000489637 PCDHA12Q9UN75 941 aa17.03■□□□□ 0.32
MVB12B-206ENST00000489637 PAXBP1Q9Y5B6 917 aa17.03■□□□□ 0.32
MVB12B-206ENST00000489637 ATRNL1Q5VV63 1379 aa17.03■□□□□ 0.32
MVB12B-206ENST00000489637 MYH7BA7E2Y1 1941 aa17.03■□□□□ 0.32
MVB12B-206ENST00000489637 FAM86B1E9PN63 330 aa17.03■□□□□ 0.32
MVB12B-206ENST00000489637 FAM86B2P0C5J1 330 aa17.03■□□□□ 0.32
MVB12B-206ENST00000489637 KCNJ6P48051 423 aa17.03■□□□□ 0.32
MVB12B-206ENST00000489637 STAT2P52630 851 aa17.03■□□□□ 0.32
MVB12B-206ENST00000489637 PAK1Q13153 545 aa17.03■□□□□ 0.32
MVB12B-206ENST00000489637 ZNF658Q5TYW1 1059 aaPredicted RBP17.03■□□□□ 0.32
MVB12B-206ENST00000489637 MTERF4Q7Z6M4 381 aaKnown RBP17.03■□□□□ 0.32
MVB12B-206ENST00000489637 AGBL1Q96MI9 1066 aa17.03■□□□□ 0.32
MVB12B-206ENST00000489637 TRIM9Q9C026 710 aa17.03■□□□□ 0.32
MVB12B-206ENST00000489637 CNOT7Q9UIV1 285 aaKnown RBP17.03■□□□□ 0.32
MVB12B-206ENST00000489637 POTEB3A0JP26 581 aa17.02■□□□□ 0.32
MVB12B-206ENST00000489637 POTECB2RU33 542 aa17.02■□□□□ 0.32
MVB12B-206ENST00000489637 RNF225M0QZC1 329 aaPredicted RBP17.02■□□□□ 0.32
MVB12B-206ENST00000489637 CAP2P40123 477 aa17.02■□□□□ 0.32
MVB12B-206ENST00000489637 PRPHP41219 470 aa17.02■□□□□ 0.32
MVB12B-206ENST00000489637 CYP4A11Q02928 519 aa17.02■□□□□ 0.32
MVB12B-206ENST00000489637 MTF1Q14872 753 aa17.02■□□□□ 0.32
MVB12B-206ENST00000489637 POTEBQ6S5H4 581 aa17.02■□□□□ 0.32
MVB12B-206ENST00000489637 ZNF710Q8N1W2 664 aa17.02■□□□□ 0.32
MVB12B-206ENST00000489637 CALML4Q96GE6 196 aa17.02■□□□□ 0.32
MVB12B-206ENST00000489637 MTFR1LQ9H019 292 aa17.02■□□□□ 0.32
MVB12B-206ENST00000489637 ERCC5P28715 1186 aaPredicted RBP17.02■□□□□ 0.31
MVB12B-206ENST00000489637 ARHGAP4P98171 946 aa17.02■□□□□ 0.31
MVB12B-206ENST00000489637 E4F1Q66K89 784 aaPredicted RBP17.02■□□□□ 0.31
MVB12B-206ENST00000489637 ZKSCAN4Q969J2 545 aaPredicted RBP17.02■□□□□ 0.31
MVB12B-206ENST00000489637 SRRTQ9BXP5 876 aaKnown RBP17.02■□□□□ 0.31
MVB12B-206ENST00000489637 ZHX3Q9H4I2 956 aa17.02■□□□□ 0.31
MVB12B-206ENST00000489637 ARHGEF10LQ9HCE6 1279 aa17.02■□□□□ 0.31
MVB12B-206ENST00000489637 HERC5Q9UII4 1024 aaKnown RBP17.02■□□□□ 0.31
MVB12B-206ENST00000489637 KIAA1024Q9UPX6 916 aa17.02■□□□□ 0.31
MVB12B-206ENST00000489637 A0A0U1RQJ8 604 aa17.01■□□□□ 0.31
MVB12B-206ENST00000489637 PSMC6P62333 389 aa17.01■□□□□ 0.31
MVB12B-206ENST00000489637 NAA30Q147X3 362 aaPredicted RBP17.01■□□□□ 0.31
MVB12B-206ENST00000489637 KRT31Q15323 416 aa17.01■□□□□ 0.31
MVB12B-206ENST00000489637 ATRIPQ8WXE1 791 aa17.01■□□□□ 0.31
MVB12B-206ENST00000489637 PURBQ96QR8 312 aaKnown RBP17.01■□□□□ 0.31
MVB12B-206ENST00000489637 DESI2Q9BSY9 194 aa17.01■□□□□ 0.31
MVB12B-206ENST00000489637 FGFBP2Q9BYJ0 223 aa17.01■□□□□ 0.31
MVB12B-206ENST00000489637 HACL1Q9UJ83 578 aa17.01■□□□□ 0.31
MVB12B-206ENST00000489637 ZNF541Q9H0D2 1346 aa17.01■□□□□ 0.31
MVB12B-206ENST00000489637 CHMP2AO43633 222 aa17.01■□□□□ 0.31
MVB12B-206ENST00000489637 TGFB2P61812 414 aa17.01■□□□□ 0.31
MVB12B-206ENST00000489637 NR1I3Q14994 352 aa17.01■□□□□ 0.31
MVB12B-206ENST00000489637 NCAPH2Q6IBW4 605 aa17.01■□□□□ 0.31
MVB12B-206ENST00000489637 GMCL1P1Q8NEA9 526 aa17.01■□□□□ 0.31
MVB12B-206ENST00000489637 GMCL1Q96IK5 515 aa17.01■□□□□ 0.31
MVB12B-206ENST00000489637 TMX2Q9Y320 296 aa17.01■□□□□ 0.31
MVB12B-206ENST00000489637 POTEFA5A3E0 1075 aa17■□□□□ 0.31
MVB12B-206ENST00000489637 POTEIP0CG38 1075 aa17■□□□□ 0.31
MVB12B-206ENST00000489637 TMEM266Q2M3C6 531 aa17■□□□□ 0.31
MVB12B-206ENST00000489637 CT47A1Q5JQC4 288 aaPredicted RBP17■□□□□ 0.31
MVB12B-206ENST00000489637 POTEGQ6S5H5 508 aa17■□□□□ 0.31
MVB12B-206ENST00000489637 POTEEQ6S8J3 1075 aa17■□□□□ 0.31
MVB12B-206ENST00000489637 IRF2BP1Q8IU81 584 aa17■□□□□ 0.31
MVB12B-206ENST00000489637 AGBL3Q8NEM8 1001 aa17■□□□□ 0.31
MVB12B-206ENST00000489637 LAD1O00515 517 aa17■□□□□ 0.31
MVB12B-206ENST00000489637 N4BP3O15049 544 aa17■□□□□ 0.31
MVB12B-206ENST00000489637 ZBTB39O15060 712 aa17■□□□□ 0.31
MVB12B-206ENST00000489637 NPM3O75607 178 aaKnown RBP17■□□□□ 0.31
MVB12B-206ENST00000489637 RBL2Q08999 1139 aa17■□□□□ 0.31
MVB12B-206ENST00000489637 KRT79Q5XKE5 535 aa17■□□□□ 0.31
MVB12B-206ENST00000489637 TRIM47Q96LD4 638 aa17■□□□□ 0.31
MVB12B-206ENST00000489637 SPDYE3A6NKU9 549 aa16.99■□□□□ 0.31
MVB12B-206ENST00000489637 PEX10O60683 326 aa16.99■□□□□ 0.31
MVB12B-206ENST00000489637 ZNF76P36508 570 aa16.99■□□□□ 0.31
MVB12B-206ENST00000489637 PTPN14Q15678 1187 aa16.99■□□□□ 0.31
MVB12B-206ENST00000489637 ANKRD40Q6AI12 368 aa16.99■□□□□ 0.31
MVB12B-206ENST00000489637 SV2BQ7L1I2 683 aa16.99■□□□□ 0.31
MVB12B-206ENST00000489637 ADSSL1Q8N142 457 aa16.99■□□□□ 0.31
MVB12B-206ENST00000489637 EXOC1Q9NV70 894 aa16.99■□□□□ 0.31
MVB12B-206ENST00000489637 PGAP2Q9UHJ9 254 aa16.99■□□□□ 0.31
MVB12B-206ENST00000489637 GREB1LQ9C091 1923 aaPredicted RBP16.99■□□□□ 0.31
MVB12B-206ENST00000489637 MED24O75448 989 aa16.99■□□□□ 0.31
MVB12B-206ENST00000489637 KLK7P49862 253 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms