RNA–Protein interactions for RNA: ENST00000489203.2

NSFL1C-209, Transcript of NSFL1 cofactor, humanhuman

TSL 3

Gene NSFL1C, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-209ENST00000489203 ZNF654Q8IZM8 581 aa25.46■■□□□ 1.67
NSFL1C-209ENST00000489203 SLC43A3Q8NBI5 491 aa25.46■■□□□ 1.67
NSFL1C-209ENST00000489203 VTI1AQ96AJ9 217 aa25.46■■□□□ 1.67
NSFL1C-209ENST00000489203 PIGSQ96S52 555 aa25.46■■□□□ 1.67
NSFL1C-209ENST00000489203 RMDN3Q96TC7 470 aa25.46■■□□□ 1.67
NSFL1C-209ENST00000489203 PNMA6FA0A0J9YX94 578 aa25.45■■□□□ 1.66
NSFL1C-209ENST00000489203 SH2B2O14492 632 aaPredicted RBP25.45■■□□□ 1.66
NSFL1C-209ENST00000489203 PTGS1P23219 599 aa25.45■■□□□ 1.66
NSFL1C-209ENST00000489203 TSGA10IPQ3SY00 556 aa25.45■■□□□ 1.66
NSFL1C-209ENST00000489203 GPR153Q6NV75 609 aa25.45■■□□□ 1.66
NSFL1C-209ENST00000489203 CXCL17Q6UXB2 119 aa25.45■■□□□ 1.66
NSFL1C-209ENST00000489203 BADQ92934 168 aa25.45■■□□□ 1.66
NSFL1C-209ENST00000489203 GPHNQ9NQX3 736 aaPredicted RBP25.45■■□□□ 1.66
NSFL1C-209ENST00000489203 TMEM39AQ9NV64 488 aa25.45■■□□□ 1.66
NSFL1C-209ENST00000489203 ITGB8P26012 769 aa25.44■■□□□ 1.66
NSFL1C-209ENST00000489203 COL9A3Q14050 684 aaPredicted RBP25.44■■□□□ 1.66
NSFL1C-209ENST00000489203 LZTS2Q9BRK4 669 aa25.44■■□□□ 1.66
NSFL1C-209ENST00000489203 CFBP00751 764 aa25.43■■□□□ 1.66
NSFL1C-209ENST00000489203 KIF5BP33176 963 aa25.43■■□□□ 1.66
NSFL1C-209ENST00000489203 PPP2R5BQ15173 497 aa25.43■■□□□ 1.66
NSFL1C-209ENST00000489203 STXBP2Q15833 593 aa25.43■■□□□ 1.66
NSFL1C-209ENST00000489203 HOMER1Q86YM7 354 aa25.43■■□□□ 1.66
NSFL1C-209ENST00000489203 CTCFLQ8NI51 663 aaPredicted RBP25.43■■□□□ 1.66
NSFL1C-209ENST00000489203 SPZ1Q9BXG8 430 aa25.43■■□□□ 1.66
NSFL1C-209ENST00000489203 TBX21Q9UL17 535 aa25.43■■□□□ 1.66
NSFL1C-209ENST00000489203 GNAQP50148 359 aa25.42■■□□□ 1.66
NSFL1C-209ENST00000489203 CPT1AP50416 773 aa25.42■■□□□ 1.66
NSFL1C-209ENST00000489203 TTLL4Q14679 1199 aa25.42■■□□□ 1.66
NSFL1C-209ENST00000489203 CCDC62Q6P9F0 684 aa25.42■■□□□ 1.66
NSFL1C-209ENST00000489203 FAM126BQ8IXS8 530 aa25.42■■□□□ 1.66
NSFL1C-209ENST00000489203 PXMP2Q9NR77 195 aa25.42■■□□□ 1.66
NSFL1C-209ENST00000489203 GRIN2DO15399 1336 aa25.41■■□□□ 1.66
NSFL1C-209ENST00000489203 CCDC69A6NI79 296 aa25.41■■□□□ 1.66
NSFL1C-209ENST00000489203 CALM1P0DP23 149 aa25.41■■□□□ 1.66
NSFL1C-209ENST00000489203 CALM2P0DP24 149 aa25.41■■□□□ 1.66
NSFL1C-209ENST00000489203 CALM3P0DP25 149 aa25.41■■□□□ 1.66
NSFL1C-209ENST00000489203 TXNP10599 105 aaKnown RBP25.41■■□□□ 1.66
NSFL1C-209ENST00000489203 RAG1P15918 1043 aa25.41■■□□□ 1.66
NSFL1C-209ENST00000489203 ITGA7Q13683 1181 aa25.41■■□□□ 1.66
NSFL1C-209ENST00000489203 ARHGEF16Q5VV41 709 aa25.41■■□□□ 1.66
NSFL1C-209ENST00000489203 SGMS1Q86VZ5 419 aa25.41■■□□□ 1.66
NSFL1C-209ENST00000489203 LRCH3Q96II8 777 aa25.41■■□□□ 1.66
NSFL1C-209ENST00000489203 POLR3EQ9NVU0 708 aa25.41■■□□□ 1.66
NSFL1C-209ENST00000489203 A6NJR5 290 aa25.4■■□□□ 1.66
NSFL1C-209ENST00000489203 EIF3JO75822 258 aaKnown RBP25.4■■□□□ 1.66
NSFL1C-209ENST00000489203 TIMP1P01033 207 aa25.4■■□□□ 1.66
NSFL1C-209ENST00000489203 CD4P01730 458 aa25.4■■□□□ 1.66
NSFL1C-209ENST00000489203 NR3C2P08235 984 aa25.4■■□□□ 1.66
NSFL1C-209ENST00000489203 NFXL1Q6ZNB6 911 aa25.4■■□□□ 1.66
NSFL1C-209ENST00000489203 OR6J1Q8NGC5 347 aa25.4■■□□□ 1.66
NSFL1C-209ENST00000489203 NEK1Q96PY6 1258 aa25.4■■□□□ 1.66
NSFL1C-209ENST00000489203 MYL10Q9BUA6 226 aa25.4■■□□□ 1.66
NSFL1C-209ENST00000489203 TLR3O15455 904 aaKnown RBP25.39■■□□□ 1.66
NSFL1C-209ENST00000489203 KPNA6O60684 536 aa25.39■■□□□ 1.66
NSFL1C-209ENST00000489203 ARIH2O95376 493 aa25.39■■□□□ 1.66
NSFL1C-209ENST00000489203 EXOSC10Q01780 885 aaKnown RBP25.39■■□□□ 1.66
NSFL1C-209ENST00000489203 BRDTQ58F21 947 aaPredicted RBP25.39■■□□□ 1.66
NSFL1C-209ENST00000489203 RASEFQ8IZ41 740 aa25.39■■□□□ 1.66
NSFL1C-209ENST00000489203 GCOM1H8Y6P7 765 aaPredicted RBP25.38■■□□□ 1.65
NSFL1C-209ENST00000489203 NEFLP07196 543 aa25.38■■□□□ 1.65
NSFL1C-209ENST00000489203 POLR2MP0CAP2 368 aa25.38■■□□□ 1.65
NSFL1C-209ENST00000489203 EIF2AK2P19525 551 aaKnown RBP25.38■■□□□ 1.65
NSFL1C-209ENST00000489203 PURAQ00577 322 aaKnown RBP25.38■■□□□ 1.65
NSFL1C-209ENST00000489203 COPS5Q92905 334 aa25.38■■□□□ 1.65
NSFL1C-209ENST00000489203 KCNB2Q92953 911 aa25.38■■□□□ 1.65
NSFL1C-209ENST00000489203 PDCD2LQ9BRP1 358 aa25.38■■□□□ 1.65
NSFL1C-209ENST00000489203 SLC12A7Q9Y666 1083 aa25.38■■□□□ 1.65
NSFL1C-209ENST00000489203 KRT32Q14532 448 aa25.37■■□□□ 1.65
NSFL1C-209ENST00000489203 SHHQ15465 462 aa25.37■■□□□ 1.65
NSFL1C-209ENST00000489203 SEPT14Q6ZU15 432 aa25.37■■□□□ 1.65
NSFL1C-209ENST00000489203 DHX32Q7L7V1 743 aaKnown RBP25.37■■□□□ 1.65
NSFL1C-209ENST00000489203 VSIG10LQ86VR7 867 aa25.37■■□□□ 1.65
NSFL1C-209ENST00000489203 RRP36Q96EU6 259 aaKnown RBP25.37■■□□□ 1.65
NSFL1C-209ENST00000489203 KIAA1217Q5T5P2 1943 aa25.36■■□□□ 1.65
NSFL1C-209ENST00000489203 HOXA13P31271 388 aaPredicted RBP25.36■■□□□ 1.65
NSFL1C-209ENST00000489203 MFSD5Q6N075 450 aa25.36■■□□□ 1.65
NSFL1C-209ENST00000489203 SRBD1Q8N5C6 995 aaKnown RBP25.36■■□□□ 1.65
NSFL1C-209ENST00000489203 FANCBQ8NB91 859 aa25.36■■□□□ 1.65
NSFL1C-209ENST00000489203 MTG1Q9BT17 334 aaPredicted RBP25.36■■□□□ 1.65
NSFL1C-209ENST00000489203 LRRC2Q9BYS8 371 aa25.36■■□□□ 1.65
NSFL1C-209ENST00000489203 DDX41Q9UJV9 622 aaKnown RBP25.36■■□□□ 1.65
NSFL1C-209ENST00000489203 PSMC6P62333 389 aa25.35■■□□□ 1.65
NSFL1C-209ENST00000489203 FPGSQ05932 587 aa25.35■■□□□ 1.65
NSFL1C-209ENST00000489203 C9orf50Q5SZB4 431 aa25.35■■□□□ 1.65
NSFL1C-209ENST00000489203 PLEKHA8P1O95397 391 aa25.34■■□□□ 1.65
NSFL1C-209ENST00000489203 GH1P01241 217 aa25.34■■□□□ 1.65
NSFL1C-209ENST00000489203 MYL3P08590 195 aa25.34■■□□□ 1.65
NSFL1C-209ENST00000489203 HMGB1P09429 215 aaKnown RBP25.34■■□□□ 1.65
NSFL1C-209ENST00000489203 ARHGAP1Q07960 439 aa25.34■■□□□ 1.65
NSFL1C-209ENST00000489203 PGM5Q15124 567 aa25.34■■□□□ 1.65
NSFL1C-209ENST00000489203 LY6KQ17RY6 165 aa25.34■■□□□ 1.65
NSFL1C-209ENST00000489203 ADCK5Q3MIX3 580 aa25.34■■□□□ 1.65
NSFL1C-209ENST00000489203 KCNV1Q6PIU1 500 aa25.34■■□□□ 1.65
NSFL1C-209ENST00000489203 EMID1Q96A84 441 aaPredicted RBP25.34■■□□□ 1.65
NSFL1C-209ENST00000489203 SEC63Q9UGP8 760 aaKnown RBP25.34■■□□□ 1.65
NSFL1C-209ENST00000489203 SCN10AQ9Y5Y9 1956 aa25.33■■□□□ 1.65
NSFL1C-209ENST00000489203 RGS20O76081 388 aa25.33■■□□□ 1.65
NSFL1C-209ENST00000489203 EPHB4P54760 987 aa25.33■■□□□ 1.65
NSFL1C-209ENST00000489203 ERICH6BQ5W0A0 696 aa25.33■■□□□ 1.65
NSFL1C-209ENST00000489203 SYNE3Q6ZMZ3 975 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms