RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 RASEFQ8IZ41 740 aa29■■■□□ 2.23
HMGN1-217ENST00000489072 BADQ92934 168 aa29■■■□□ 2.23
HMGN1-217ENST00000489072 LAMA2P24043 3122 aaKnown RBP29■■■□□ 2.23
HMGN1-217ENST00000489072 PNMA6FA0A0J9YX94 578 aa28.99■■■□□ 2.23
HMGN1-217ENST00000489072 LIFRP42702 1097 aa28.99■■■□□ 2.23
HMGN1-217ENST00000489072 TMTC2Q8N394 836 aa28.99■■■□□ 2.23
HMGN1-217ENST00000489072 CTCFLQ8NI51 663 aaPredicted RBP28.99■■■□□ 2.23
HMGN1-217ENST00000489072 SCFD2Q8WU76 684 aa28.99■■■□□ 2.23
HMGN1-217ENST00000489072 CCDC69A6NI79 296 aa28.98■■■□□ 2.23
HMGN1-217ENST00000489072 DCDC2CA8MYV0 355 aa28.98■■■□□ 2.23
HMGN1-217ENST00000489072 ARVCFO00192 962 aa28.98■■■□□ 2.23
HMGN1-217ENST00000489072 KIAA0355O15063 1070 aa28.98■■■□□ 2.23
HMGN1-217ENST00000489072 ARIH2O95376 493 aa28.98■■■□□ 2.23
HMGN1-217ENST00000489072 PPP2R5BQ15173 497 aa28.98■■■□□ 2.23
HMGN1-217ENST00000489072 PIBF1Q8WXW3 757 aa28.98■■■□□ 2.23
HMGN1-217ENST00000489072 COPS5Q92905 334 aa28.98■■■□□ 2.23
HMGN1-217ENST00000489072 LRCH3Q96II8 777 aa28.98■■■□□ 2.23
HMGN1-217ENST00000489072 EIF2AK2P19525 551 aaKnown RBP28.97■■■□□ 2.23
HMGN1-217ENST00000489072 RXRAP19793 462 aa28.97■■■□□ 2.23
HMGN1-217ENST00000489072 ADCK5Q3MIX3 580 aa28.97■■■□□ 2.23
HMGN1-217ENST00000489072 ARHGEF16Q5VV41 709 aa28.97■■■□□ 2.23
HMGN1-217ENST00000489072 IWS1Q96ST2 819 aa28.97■■■□□ 2.23
HMGN1-217ENST00000489072 SPZ1Q9BXG8 430 aa28.97■■■□□ 2.23
HMGN1-217ENST00000489072 PXMP2Q9NR77 195 aa28.97■■■□□ 2.23
HMGN1-217ENST00000489072 TMEM39AQ9NV64 488 aa28.97■■■□□ 2.23
HMGN1-217ENST00000489072 GRIN2DO15399 1336 aa28.96■■■□□ 2.23
HMGN1-217ENST00000489072 ZEB2O60315 1214 aa28.96■■■□□ 2.23
HMGN1-217ENST00000489072 CABYRO75952 493 aa28.96■■■□□ 2.23
HMGN1-217ENST00000489072 PLEKHA8P1O95397 391 aa28.96■■■□□ 2.23
HMGN1-217ENST00000489072 HOXA13P31271 388 aaPredicted RBP28.96■■■□□ 2.23
HMGN1-217ENST00000489072 KIF5BP33176 963 aa28.96■■■□□ 2.23
HMGN1-217ENST00000489072 LRIT3Q3SXY7 679 aa28.96■■■□□ 2.23
HMGN1-217ENST00000489072 TSGA10IPQ3SY00 556 aa28.96■■■□□ 2.23
HMGN1-217ENST00000489072 RAB11FIP4Q86YS3 637 aa28.96■■■□□ 2.23
HMGN1-217ENST00000489072 SLC43A3Q8NBI5 491 aa28.96■■■□□ 2.23
HMGN1-217ENST00000489072 OR6J1Q8NGC5 347 aa28.96■■■□□ 2.23
HMGN1-217ENST00000489072 NEK1Q96PY6 1258 aa28.96■■■□□ 2.23
HMGN1-217ENST00000489072 MROH7Q68CQ1 1323 aa28.95■■■□□ 2.23
HMGN1-217ENST00000489072 NKRFO15226 690 aaKnown RBP eCLIP28.95■■■□□ 2.22
HMGN1-217ENST00000489072 TXNP10599 105 aaKnown RBP28.95■■■□□ 2.22
HMGN1-217ENST00000489072 EXOSC10Q01780 885 aaKnown RBP28.95■■■□□ 2.22
HMGN1-217ENST00000489072 TRAF1Q13077 416 aa28.95■■■□□ 2.22
HMGN1-217ENST00000489072 CCDC62Q6P9F0 684 aa28.95■■■□□ 2.22
HMGN1-217ENST00000489072 SRBD1Q8N5C6 995 aaKnown RBP28.95■■■□□ 2.22
HMGN1-217ENST00000489072 MAP3K20Q9NYL2 800 aaKnown RBP28.95■■■□□ 2.22
HMGN1-217ENST00000489072 TBX21Q9UL17 535 aa28.95■■■□□ 2.22
HMGN1-217ENST00000489072 NR3C2P08235 984 aa28.94■■■□□ 2.22
HMGN1-217ENST00000489072 TTLL4Q14679 1199 aa28.94■■■□□ 2.22
HMGN1-217ENST00000489072 STXBP2Q15833 593 aa28.94■■■□□ 2.22
HMGN1-217ENST00000489072 SEPT14Q6ZU15 432 aa28.94■■■□□ 2.22
HMGN1-217ENST00000489072 SGMS1Q86VZ5 419 aa28.94■■■□□ 2.22
HMGN1-217ENST00000489072 FAM126BQ8IXS8 530 aa28.94■■■□□ 2.22
HMGN1-217ENST00000489072 TCEANC2Q96MN5 208 aa28.94■■■□□ 2.22
HMGN1-217ENST00000489072 RAG1P15918 1043 aa28.93■■■□□ 2.22
HMGN1-217ENST00000489072 SMARCA1P28370 1054 aa28.93■■■□□ 2.22
HMGN1-217ENST00000489072 PSMC6P62333 389 aa28.93■■■□□ 2.22
HMGN1-217ENST00000489072 ITGA7Q13683 1181 aa28.93■■■□□ 2.22
HMGN1-217ENST00000489072 CMTR1Q8N1G2 835 aaKnown RBP28.93■■■□□ 2.22
HMGN1-217ENST00000489072 SAMD3Q8N6K7 520 aa28.93■■■□□ 2.22
HMGN1-217ENST00000489072 LZTS2Q9BRK4 669 aa28.93■■■□□ 2.22
HMGN1-217ENST00000489072 SLC12A7Q9Y666 1083 aa28.93■■■□□ 2.22
HMGN1-217ENST00000489072 SCN10AQ9Y5Y9 1956 aa28.92■■■□□ 2.22
HMGN1-217ENST00000489072 GCOM1H8Y6P7 765 aaPredicted RBP28.92■■■□□ 2.22
HMGN1-217ENST00000489072 POLR2MP0CAP2 368 aa28.92■■■□□ 2.22
HMGN1-217ENST00000489072 CALM1P0DP23 149 aa28.92■■■□□ 2.22
HMGN1-217ENST00000489072 CALM2P0DP24 149 aa28.92■■■□□ 2.22
HMGN1-217ENST00000489072 CALM3P0DP25 149 aa28.92■■■□□ 2.22
HMGN1-217ENST00000489072 GNAQP50148 359 aa28.92■■■□□ 2.22
HMGN1-217ENST00000489072 CPT1AP50416 773 aa28.92■■■□□ 2.22
HMGN1-217ENST00000489072 RRP36Q96EU6 259 aaKnown RBP28.92■■■□□ 2.22
HMGN1-217ENST00000489072 PDCD2LQ9BRP1 358 aa28.92■■■□□ 2.22
HMGN1-217ENST00000489072 CD4P01730 458 aa28.91■■■□□ 2.22
HMGN1-217ENST00000489072 PURAQ00577 322 aaKnown RBP28.91■■■□□ 2.22
HMGN1-217ENST00000489072 LY6KQ17RY6 165 aa28.91■■■□□ 2.22
HMGN1-217ENST00000489072 DHX32Q7L7V1 743 aaKnown RBP28.91■■■□□ 2.22
HMGN1-217ENST00000489072 IL31RAQ8NI17 732 aa28.91■■■□□ 2.22
HMGN1-217ENST00000489072 KCNB2Q92953 911 aa28.91■■■□□ 2.22
HMGN1-217ENST00000489072 POLR3EQ9NVU0 708 aa28.91■■■□□ 2.22
HMGN1-217ENST00000489072 A6NJR5 290 aa28.9■■■□□ 2.22
HMGN1-217ENST00000489072 EIF3JO75822 258 aaKnown RBP28.9■■■□□ 2.22
HMGN1-217ENST00000489072 MYL3P08590 195 aa28.9■■■□□ 2.22
HMGN1-217ENST00000489072 SHHQ15465 462 aa28.9■■■□□ 2.22
HMGN1-217ENST00000489072 C9orf50Q5SZB4 431 aa28.9■■■□□ 2.22
HMGN1-217ENST00000489072 MICU3Q86XE3 530 aa28.9■■■□□ 2.22
HMGN1-217ENST00000489072 FANCBQ8NB91 859 aa28.9■■■□□ 2.22
HMGN1-217ENST00000489072 MYH7BA7E2Y1 1941 aa28.9■■■□□ 2.22
HMGN1-217ENST00000489072 TIMP1P01033 207 aa28.89■■■□□ 2.22
HMGN1-217ENST00000489072 EPHB4P54760 987 aa28.89■■■□□ 2.22
HMGN1-217ENST00000489072 KRT32Q14532 448 aa28.89■■■□□ 2.22
HMGN1-217ENST00000489072 PGM5Q15124 567 aa28.89■■■□□ 2.22
HMGN1-217ENST00000489072 APOA5Q6Q788 366 aa28.89■■■□□ 2.22
HMGN1-217ENST00000489072 TMTC3Q6ZXV5 915 aa28.89■■■□□ 2.22
HMGN1-217ENST00000489072 FCHSD1Q86WN1 690 aa28.89■■■□□ 2.22
HMGN1-217ENST00000489072 BRPF3Q9ULD4 1205 aa28.89■■■□□ 2.22
HMGN1-217ENST00000489072 TLR3O15455 904 aaKnown RBP28.88■■■□□ 2.21
HMGN1-217ENST00000489072 RGS20O76081 388 aa28.88■■■□□ 2.21
HMGN1-217ENST00000489072 MYCLP12524 364 aaPredicted RBP28.88■■■□□ 2.21
HMGN1-217ENST00000489072 ARHGAP1Q07960 439 aa28.88■■■□□ 2.21
HMGN1-217ENST00000489072 VSIG10LQ86VR7 867 aa28.88■■■□□ 2.21
HMGN1-217ENST00000489072 SEC63Q9UGP8 760 aaKnown RBP28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms