RNA–Protein interactions for RNA: ENST00000489071.5

ERGIC3-218, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-218ENST00000489071 DCDC2CA8MYV0 355 aa9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 TMEM232C9JQI7 657 aa9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 KIAA0355O15063 1070 aa9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 ZBTB43O43298 467 aa9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 PQBP1O60828 265 aaKnown RBP9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 RAG1P15918 1043 aa9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 CST5P28325 142 aaPredicted RBP9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 SLC1A4P43007 532 aa9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 ACLYP53396 1101 aa9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 SMAD3P84022 425 aaKnown RBP9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 IKQ13123 557 aaPredicted RBP9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 ACVR2BQ13705 512 aa9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 SEC23AQ15436 765 aa9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 KCNA10Q16322 511 aa9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 TKFCQ3LXA3 575 aa9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 RRP12Q5JTH9 1297 aaKnown RBP9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 APOA5Q6Q788 366 aa9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 ANKRD33Q7Z3H0 272 aa9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 SH3RF1Q7Z6J0 888 aa9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 PCSK9Q8NBP7 692 aaKnown RBP9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 GLT1D1Q96MS3 346 aa9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 ACAD9Q9H845 621 aa9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 TMEM39AQ9NV64 488 aa9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 ISY1Q9ULR0 285 aaKnown RBP9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 SMC3Q9UQE7 1217 aa9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 SLC12A7Q9Y666 1083 aa9.93□□□□□ -0.82
ERGIC3-218ENST00000489071 ELP1O95163 1332 aa9.92□□□□□ -0.82
ERGIC3-218ENST00000489071 TNKSO95271 1327 aa9.92□□□□□ -0.82
ERGIC3-218ENST00000489071 KLF18A0A0U1RQI7 1052 aa9.92□□□□□ -0.82
ERGIC3-218ENST00000489071 PLA2G6O60733 806 aa9.92□□□□□ -0.82
ERGIC3-218ENST00000489071 DDAH1O94760 285 aa9.92□□□□□ -0.82
ERGIC3-218ENST00000489071 APOBRQ0VD83 1088 aa9.92□□□□□ -0.82
ERGIC3-218ENST00000489071 C9orf50Q5SZB4 431 aa9.92□□□□□ -0.82
ERGIC3-218ENST00000489071 IFIT1BQ5T764 474 aaKnown RBP9.92□□□□□ -0.82
ERGIC3-218ENST00000489071 NFXL1Q6ZNB6 911 aa9.92□□□□□ -0.82
ERGIC3-218ENST00000489071 ARMCX2Q7L311 632 aa9.92□□□□□ -0.82
ERGIC3-218ENST00000489071 CATIPQ7Z7H3 387 aa9.92□□□□□ -0.82
ERGIC3-218ENST00000489071 ENAHQ8N8S7 591 aaPredicted RBP9.92□□□□□ -0.82
ERGIC3-218ENST00000489071 SMARCC2Q8TAQ2 1214 aa9.92□□□□□ -0.82
ERGIC3-218ENST00000489071 LENG1Q96BZ8 264 aaPredicted RBP9.92□□□□□ -0.82
ERGIC3-218ENST00000489071 GMCL1Q96IK5 515 aa9.92□□□□□ -0.82
ERGIC3-218ENST00000489071 TCEANC2Q96MN5 208 aa9.92□□□□□ -0.82
ERGIC3-218ENST00000489071 STX8Q9UNK0 236 aa9.92□□□□□ -0.82
ERGIC3-218ENST00000489071 LAMA3Q16787 3333 aa9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 ASB14A6NK59 587 aa9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 GOLGA8BA8MQT2 603 aa9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 C6orf222P0C671 652 aaPredicted RBP9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 METAP2P50579 478 aaKnown RBP eCLIP9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 GJA9P57773 515 aa9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 FPGSQ05932 587 aa9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 COL9A3Q14050 684 aaPredicted RBP9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 CCDC144BQ3MJ40 725 aa9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 CCSAPQ6IQ19 270 aaPredicted RBP9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 RCSD1Q6JBY9 416 aa9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 CHST3Q7LGC8 479 aa9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 CCDC83Q8IWF9 413 aa9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 CCDC144CPQ8IYA2 1237 aa9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 VTI1AQ96AJ9 217 aa9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 RNPC3Q96LT9 517 aaKnown RBP9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 FAM161BQ96MY7 647 aa9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 GUCD1Q96NT3 240 aa9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 LRRC2Q9BYS8 371 aa9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 UPF3AQ9H1J1 476 aaKnown RBP9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 HOMER2Q9NSB8 354 aa9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 RNF146Q9NTX7 359 aa9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 RBM28Q9NW13 759 aaKnown RBP9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 BRPF3Q9ULD4 1205 aa9.91□□□□□ -0.82
ERGIC3-218ENST00000489071 STK36Q9NRP7 1315 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 TMEM265A0A087WTH1 108 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 A0A0U1RQG5 324 aaPredicted RBP9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 CPLX1O14810 134 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 TLR3O15455 904 aaKnown RBP9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 LARGE1O95461 756 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 TIMP1P01033 207 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 ASGR1P07306 291 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 TOP1P11387 765 aaKnown RBP9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 ALAS1P13196 640 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 ITGB8P26012 769 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 SMARCA1P28370 1054 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 KIF5BP33176 963 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 GNAQP50148 359 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 NKX3-2P78367 333 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 FAAP100Q0VG06 881 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 SCRN1Q12765 414 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 GNASQ5JWF2 1037 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 CCDC174Q6PII3 467 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 CLEC17AQ6ZS10 378 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 NOL8Q76FK4 1167 aaKnown RBP9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 ZNF654Q8IZM8 581 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 FAM177A1Q8N128 213 aaPredicted RBP9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 FAM133AQ8N9E0 248 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 FGD4Q96M96 766 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 TRERF1Q96PN7 1200 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 LZTS2Q9BRK4 669 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 SEMA6BQ9H3T3 888 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 A1CFQ9NQ94 594 aaKnown RBP9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 INCENPQ9NQS7 918 aa9.9□□□□□ -0.82
ERGIC3-218ENST00000489071 ZNF536O15090 1300 aa9.89□□□□□ -0.83
ERGIC3-218ENST00000489071 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms