RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 CCL15Q16663 113 aa8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 INF2Q27J81 1249 aa8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 SKOR2Q2VWA4 1001 aaPredicted RBP8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 TKFCQ3LXA3 575 aa8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 TPRNQ4KMQ1 711 aa8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 NOM1Q5C9Z4 860 aaKnown RBP8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 TTC38Q5R3I4 469 aa8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 SNRNP48Q6IEG0 339 aaKnown RBP8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 GPAT2Q6NUI2 795 aa8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 USP17L6PQ6QN14 398 aa8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 NEK8Q86SG6 692 aa8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 SAPCD2Q86UD0 394 aa8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 SAMD3Q8N6K7 520 aa8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 MB21D1Q8N884 522 aa8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 TMEM87AQ8NBN3 555 aa8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 LINC00301Q8NCQ3 95 aa8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 KCNG4Q8TDN1 519 aa8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 TRERF1Q96PN7 1200 aa8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 ASCC2Q9H1I8 757 aaPredicted RBP8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 EHMT1Q9H9B1 1298 aa8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 LMBRD1Q9NUN5 540 aa8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 POLR3EQ9NVU0 708 aa8.62□□□□□ -1.03
APOBEC3A-203ENST00000488758 ELP1O95163 1332 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 MANSC4A6NHS7 340 aaPredicted RBP8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 PIK3CDO00329 1044 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 PDHXO00330 501 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 MEIS2O14770 477 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 ATP2A1O14983 1001 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 SPTLC2O15270 562 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 TAL1P17542 331 aaPredicted RBP8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 ME1P48163 572 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 NASPP49321 788 aaPredicted RBP8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 UBE2HP62256 183 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 HERVK_113P62684 666 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 MOGSQ13724 837 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 SLC39A14Q15043 492 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 LETM2Q2VYF4 491 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 LBX2Q6XYB7 198 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 ANKRD23Q86SG2 305 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 FCHSD1Q86WN1 690 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 REPS2Q8NFH8 660 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 TBCKQ8TEA7 893 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 GTF3C2Q8WUA4 911 aaPredicted RBP8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 TBC1D5Q92609 795 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 CCDC102AQ96A19 550 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 NAP1L4Q99733 375 aaKnown RBP8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 TEX13BQ9BXU2 312 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 FTOQ9C0B1 505 aaKnown RBP eCLIP8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 HOMER2Q9NSB8 354 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 RNF146Q9NTX7 359 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 MAP3K20Q9NYL2 800 aaKnown RBP8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 LHX6Q9UPM6 363 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 SLC45A1Q9Y2W3 748 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 PCDHB6Q9Y5E3 794 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 TLL2Q9Y6L7 1015 aa8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 DDX49Q9Y6V7 483 aaKnown RBP8.61□□□□□ -1.03
APOBEC3A-203ENST00000488758 PTPRFP10586 1907 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 MYH15Q9Y2K3 1946 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 BTBD19C9JJ37 291 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 OPLAHO14841 1288 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 TRAK2O60296 914 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 CCNT1O60563 726 aaKnown RBP8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 PPP6R2O75170 966 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 GADD45BO75293 160 aaPredicted RBP8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 MARCKSP29966 332 aaPredicted RBP8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 HOXA13P31271 388 aaPredicted RBP8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 MCM7P33993 719 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 LBX1P52954 281 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 INHBEP58166 350 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 PTPAQ15257 358 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 MUM1L1Q5H9M0 696 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 RNF207Q6ZRF8 634 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 RASAL3Q86YV0 1011 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 CHST13Q8NET6 341 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 CLEC4DQ8WXI8 215 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 BRI3BPQ8WY22 251 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 PGBD1Q96JS3 809 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 PAGR1Q9BTK6 254 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 KRTAP3-3Q9BYR6 98 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 KRTAP3-2Q9BYR7 98 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 ANO3Q9BYT9 981 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 FBXO40Q9UH90 709 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 ZNF214Q9UL59 606 aaPredicted RBP8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 RABGAP1Q9Y3P9 1069 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 LOC285556D6RIA3 1793 aa8.6□□□□□ -1.03
APOBEC3A-203ENST00000488758 TESPA1A2RU30 521 aaPredicted RBP8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 NFIBO00712 420 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 MARCH6O60337 910 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 SLC25A27O95847 323 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 MBD3O95983 291 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 COPB2P35606 906 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 ZNF76P36508 570 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 USP11P51784 963 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 PTGDRQ13258 359 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 ORC2Q13416 577 aaPredicted RBP8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 ADALQ6DHV7 355 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 NSMFQ6X4W1 530 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 NCAPG2Q86XI2 1143 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 KRI1Q8N9T8 703 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms