RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 PSTPIP2Q9H939 334 aa22.15■■□□□ 1.14
CCM2-216ENST00000488727 COL20A1Q9P218 1284 aa22.15■■□□□ 1.14
CCM2-216ENST00000488727 ASTN1O14525 1302 aa22.15■■□□□ 1.14
CCM2-216ENST00000488727 MEIS2O14770 477 aa22.14■■□□□ 1.14
CCM2-216ENST00000488727 HOXC6P09630 235 aa22.14■■□□□ 1.14
CCM2-216ENST00000488727 RGS2P41220 211 aa22.14■■□□□ 1.14
CCM2-216ENST00000488727 DNM1Q05193 864 aaKnown RBP22.14■■□□□ 1.14
CCM2-216ENST00000488727 DPP9Q86TI2 863 aa22.14■■□□□ 1.14
CCM2-216ENST00000488727 SYTL5Q8TDW5 730 aaPredicted RBP22.14■■□□□ 1.14
CCM2-216ENST00000488727 ANP32BQ92688 251 aaKnown RBP22.14■■□□□ 1.14
CCM2-216ENST00000488727 APBA2Q99767 749 aa22.14■■□□□ 1.14
CCM2-216ENST00000488727 ALG1Q9BT22 464 aa22.14■■□□□ 1.14
CCM2-216ENST00000488727 SH3GLB2Q9NR46 395 aa22.14■■□□□ 1.14
CCM2-216ENST00000488727 SMCO2A6NFE2 343 aa22.14■■□□□ 1.13
CCM2-216ENST00000488727 POTEB2H3BUK9 544 aa22.14■■□□□ 1.13
CCM2-216ENST00000488727 ADAMTS3O15072 1205 aa22.14■■□□□ 1.13
CCM2-216ENST00000488727 HMGN5P82970 282 aaKnown RBP22.14■■□□□ 1.13
CCM2-216ENST00000488727 CCDC183Q5T5S1 534 aa22.14■■□□□ 1.13
CCM2-216ENST00000488727 USP17L6PQ6QN14 398 aa22.14■■□□□ 1.13
CCM2-216ENST00000488727 MAF1Q9H063 256 aa22.14■■□□□ 1.13
CCM2-216ENST00000488727 ZMYND12Q9H0C1 365 aa22.14■■□□□ 1.13
CCM2-216ENST00000488727 PTPN22Q9Y2R2 807 aa22.14■■□□□ 1.13
CCM2-216ENST00000488727 PTCH2Q9Y6C5 1203 aa22.14■■□□□ 1.13
CCM2-216ENST00000488727 ELP1O95163 1332 aa22.13■■□□□ 1.13
CCM2-216ENST00000488727 ESYT2A0FGR8 921 aa22.13■■□□□ 1.13
CCM2-216ENST00000488727 GCOM1H8Y6P7 765 aaPredicted RBP22.13■■□□□ 1.13
CCM2-216ENST00000488727 FIBPO43427 364 aa22.13■■□□□ 1.13
CCM2-216ENST00000488727 LETM1O95202 739 aaPredicted RBP22.13■■□□□ 1.13
CCM2-216ENST00000488727 POLR2MP0CAP2 368 aa22.13■■□□□ 1.13
CCM2-216ENST00000488727 PRMT2P55345 433 aa22.13■■□□□ 1.13
CCM2-216ENST00000488727 IRF5Q13568 498 aa22.13■■□□□ 1.13
CCM2-216ENST00000488727 CCL14Q16627 93 aa22.13■■□□□ 1.13
CCM2-216ENST00000488727 WASF1Q92558 559 aa22.13■■□□□ 1.13
CCM2-216ENST00000488727 RIC8AQ9NPQ8 531 aa22.13■■□□□ 1.13
CCM2-216ENST00000488727 MCM3APO60318 1980 aa22.13■■□□□ 1.13
CCM2-216ENST00000488727 SOWAHBA6NEL2 793 aa22.12■■□□□ 1.13
CCM2-216ENST00000488727 PIK3CDO00329 1044 aa22.12■■□□□ 1.13
CCM2-216ENST00000488727 XRCC5P13010 732 aaKnown RBP22.12■■□□□ 1.13
CCM2-216ENST00000488727 KRT85P78386 507 aa22.12■■□□□ 1.13
CCM2-216ENST00000488727 UBE2SQ16763 222 aa22.12■■□□□ 1.13
CCM2-216ENST00000488727 SAMD3Q8N6K7 520 aa22.12■■□□□ 1.13
CCM2-216ENST00000488727 CCDC148Q8NFR7 591 aa22.12■■□□□ 1.13
CCM2-216ENST00000488727 CCDC12Q8WUD4 166 aaPredicted RBP22.12■■□□□ 1.13
CCM2-216ENST00000488727 CUL5Q93034 780 aa22.12■■□□□ 1.13
CCM2-216ENST00000488727 MAP3K20Q9NYL2 800 aaKnown RBP22.12■■□□□ 1.13
CCM2-216ENST00000488727 FLRT1Q9NZU1 646 aa22.12■■□□□ 1.13
CCM2-216ENST00000488727 ADCY7P51828 1080 aa22.11■■□□□ 1.13
CCM2-216ENST00000488727 NPY5RQ15761 445 aa22.11■■□□□ 1.13
CCM2-216ENST00000488727 RAET1EQ8TD07 263 aa22.11■■□□□ 1.13
CCM2-216ENST00000488727 MAML3Q96JK9 1138 aa22.11■■□□□ 1.13
CCM2-216ENST00000488727 TAAR1Q96RJ0 339 aa22.11■■□□□ 1.13
CCM2-216ENST00000488727 KCNJ14Q9UNX9 436 aa22.11■■□□□ 1.13
CCM2-216ENST00000488727 DIS3Q9Y2L1 958 aaKnown RBP22.11■■□□□ 1.13
CCM2-216ENST00000488727 FOSBP53539 338 aa22.11■■□□□ 1.13
CCM2-216ENST00000488727 TRIB2Q92519 343 aa22.11■■□□□ 1.13
CCM2-216ENST00000488727 PHF20Q9BVI0 1012 aa22.11■■□□□ 1.13
CCM2-216ENST00000488727 TSPY26PQ9H489 355 aa22.11■■□□□ 1.13
CCM2-216ENST00000488727 SLC5A4Q9NY91 659 aa22.11■■□□□ 1.13
CCM2-216ENST00000488727 ELNP15502 786 aa22.1■■□□□ 1.13
CCM2-216ENST00000488727 FCHSD1Q86WN1 690 aa22.1■■□□□ 1.13
CCM2-216ENST00000488727 FAM184AQ8NB25 1140 aa22.1■■□□□ 1.13
CCM2-216ENST00000488727 C6orf50Q9HD87 102 aa22.1■■□□□ 1.13
CCM2-216ENST00000488727 LRRC37A2A6NM11 1700 aa22.1■■□□□ 1.13
CCM2-216ENST00000488727 ADCY3O60266 1144 aa22.09■■□□□ 1.13
CCM2-216ENST00000488727 IGHA2P01877 340 aa22.09■■□□□ 1.13
CCM2-216ENST00000488727 MRPL12P52815 198 aaKnown RBP22.09■■□□□ 1.13
CCM2-216ENST00000488727 NLRP5P59047 1200 aa22.09■■□□□ 1.13
CCM2-216ENST00000488727 RRAGDQ9NQL2 400 aaPredicted RBP22.09■■□□□ 1.13
CCM2-216ENST00000488727 CLK2P49760 499 aaKnown RBP22.09■■□□□ 1.13
CCM2-216ENST00000488727 ALDH5A1P51649 535 aaPredicted RBP22.09■■□□□ 1.13
CCM2-216ENST00000488727 FAM177A1Q8N128 213 aaPredicted RBP22.09■■□□□ 1.13
CCM2-216ENST00000488727 TMEM260Q9NX78 707 aa22.09■■□□□ 1.13
CCM2-216ENST00000488727 BIN2Q9UBW5 565 aaPredicted RBP22.09■■□□□ 1.13
CCM2-216ENST00000488727 XBP1P17861 261 aa22.08■■□□□ 1.12
CCM2-216ENST00000488727 GNA11P29992 359 aa22.08■■□□□ 1.12
CCM2-216ENST00000488727 OLFML2BQ68BL8 750 aa22.08■■□□□ 1.12
CCM2-216ENST00000488727 KRT40Q6A162 431 aa22.08■■□□□ 1.12
CCM2-216ENST00000488727 ZNF467Q7Z7K2 595 aaPredicted RBP22.08■■□□□ 1.12
CCM2-216ENST00000488727 DNERQ8NFT8 737 aa22.08■■□□□ 1.12
CCM2-216ENST00000488727 PXYLP1Q8TE99 480 aa22.08■■□□□ 1.12
CCM2-216ENST00000488727 TRIM44Q96DX7 344 aaPredicted RBP22.08■■□□□ 1.12
CCM2-216ENST00000488727 PDLIM2Q96JY6 352 aa22.08■■□□□ 1.12
CCM2-216ENST00000488727 RMDN3Q96TC7 470 aa22.08■■□□□ 1.12
CCM2-216ENST00000488727 PCDHA4Q9UN74 947 aa22.08■■□□□ 1.12
CCM2-216ENST00000488727 KIF3AQ9Y496 699 aa22.08■■□□□ 1.12
CCM2-216ENST00000488727 RESTQ13127 1097 aa22.07■■□□□ 1.12
CCM2-216ENST00000488727 FBXO46Q6PJ61 603 aaPredicted RBP22.07■■□□□ 1.12
CCM2-216ENST00000488727 MAMDC4Q6UXC1 1216 aa22.07■■□□□ 1.12
CCM2-216ENST00000488727 DAGLBQ8NCG7 672 aa22.07■■□□□ 1.12
CCM2-216ENST00000488727 RASGRP4Q8TDF6 673 aa22.07■■□□□ 1.12
CCM2-216ENST00000488727 C8orf76Q96K31 380 aa22.07■■□□□ 1.12
CCM2-216ENST00000488727 SCAND2PQ9GZW5 306 aaPredicted RBP22.07■■□□□ 1.12
CCM2-216ENST00000488727 GLT8D2Q9H1C3 349 aa22.07■■□□□ 1.12
CCM2-216ENST00000488727 PXMP2Q9NR77 195 aa22.07■■□□□ 1.12
CCM2-216ENST00000488727 ADD3Q9UEY8 706 aaKnown RBP22.07■■□□□ 1.12
CCM2-216ENST00000488727 GUCY1B3Q02153 619 aa22.06■■□□□ 1.12
CCM2-216ENST00000488727 PKN2Q16513 984 aaKnown RBP22.06■■□□□ 1.12
CCM2-216ENST00000488727 TEX2Q8IWB9 1127 aa22.06■■□□□ 1.12
CCM2-216ENST00000488727 REXO1Q8N1G1 1221 aaKnown RBP22.06■■□□□ 1.12
CCM2-216ENST00000488727 PGBD1Q96JS3 809 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 603.3 ms