RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 FBXO16Q8IX29 292 aaPredicted RBP17.35■□□□□ 0.37
CXCL12-207ENST00000488591 DIS3LQ8TF46 1054 aaKnown RBP17.35■□□□□ 0.37
CXCL12-207ENST00000488591 PSTPIP2Q9H939 334 aa17.35■□□□□ 0.37
CXCL12-207ENST00000488591 COL20A1Q9P218 1284 aa17.35■□□□□ 0.37
CXCL12-207ENST00000488591 DDX49Q9Y6V7 483 aaKnown RBP17.35■□□□□ 0.37
CXCL12-207ENST00000488591 hCG_1984214I3L0E3 225 aa17.34■□□□□ 0.37
CXCL12-207ENST00000488591 CPLX1O14810 134 aa17.34■□□□□ 0.37
CXCL12-207ENST00000488591 PGK1P00558 417 aa17.34■□□□□ 0.37
CXCL12-207ENST00000488591 EIF2AK2P19525 551 aaKnown RBP17.34■□□□□ 0.37
CXCL12-207ENST00000488591 MNX1P50219 401 aaPredicted RBP17.34■□□□□ 0.37
CXCL12-207ENST00000488591 LRRC41Q15345 812 aa17.34■□□□□ 0.37
CXCL12-207ENST00000488591 STXBP2Q15833 593 aa17.34■□□□□ 0.37
CXCL12-207ENST00000488591 GJC2Q5T442 439 aaPredicted RBP17.34■□□□□ 0.37
CXCL12-207ENST00000488591 TAPT1Q6NXT6 567 aa17.34■□□□□ 0.37
CXCL12-207ENST00000488591 CPLX2Q6PUV4 134 aaKnown RBP17.34■□□□□ 0.37
CXCL12-207ENST00000488591 FCHSD1Q86WN1 690 aa17.34■□□□□ 0.37
CXCL12-207ENST00000488591 ZNF713Q8N859 430 aaPredicted RBP17.34■□□□□ 0.37
CXCL12-207ENST00000488591 DPF3Q92784 378 aa17.34■□□□□ 0.37
CXCL12-207ENST00000488591 LARP6Q9BRS8 491 aaKnown RBP17.34■□□□□ 0.37
CXCL12-207ENST00000488591 PXMP2Q9NR77 195 aa17.34■□□□□ 0.37
CXCL12-207ENST00000488591 PIK3CDO00329 1044 aa17.33■□□□□ 0.36
CXCL12-207ENST00000488591 PRPF3O43395 683 aaKnown RBP17.33■□□□□ 0.36
CXCL12-207ENST00000488591 EIF3JO75822 258 aaKnown RBP17.33■□□□□ 0.36
CXCL12-207ENST00000488591 NR3C2P08235 984 aa17.33■□□□□ 0.36
CXCL12-207ENST00000488591 ADCYAP1R1P41586 468 aa17.33■□□□□ 0.36
CXCL12-207ENST00000488591 NEK4P51957 841 aa17.33■□□□□ 0.36
CXCL12-207ENST00000488591 NAPAP54920 295 aa17.33■□□□□ 0.36
CXCL12-207ENST00000488591 PPP1R18Q6NYC8 613 aa17.33■□□□□ 0.36
CXCL12-207ENST00000488591 SCFD2Q8WU76 684 aa17.33■□□□□ 0.36
CXCL12-207ENST00000488591 GPKOWQ92917 476 aaPredicted RBP eCLIP17.33■□□□□ 0.36
CXCL12-207ENST00000488591 C22orf23Q9BZE7 217 aa17.33■□□□□ 0.36
CXCL12-207ENST00000488591 AP5M1Q9H0R1 490 aa17.33■□□□□ 0.36
CXCL12-207ENST00000488591 PDGFCQ9NRA1 345 aa17.33■□□□□ 0.36
CXCL12-207ENST00000488591 Q9Y3F1 56 aa17.33■□□□□ 0.36
CXCL12-207ENST00000488591 SYNRGQ9UMZ2 1314 aa17.32■□□□□ 0.36
CXCL12-207ENST00000488591 RBM47A0AV96 593 aaKnown RBP17.32■□□□□ 0.36
CXCL12-207ENST00000488591 C6orf222P0C671 652 aaPredicted RBP17.32■□□□□ 0.36
CXCL12-207ENST00000488591 IFNAR1P17181 557 aa17.32■□□□□ 0.36
CXCL12-207ENST00000488591 STK3Q13188 491 aa17.32■□□□□ 0.36
CXCL12-207ENST00000488591 WWC2Q6AWC2 1192 aa17.32■□□□□ 0.36
CXCL12-207ENST00000488591 TEX2Q8IWB9 1127 aa17.32■□□□□ 0.36
CXCL12-207ENST00000488591 TRIM22Q8IYM9 498 aa17.32■□□□□ 0.36
CXCL12-207ENST00000488591 LENG1Q96BZ8 264 aaPredicted RBP17.32■□□□□ 0.36
CXCL12-207ENST00000488591 PDCD2LQ9BRP1 358 aa17.32■□□□□ 0.36
CXCL12-207ENST00000488591 TSEN34Q9BSV6 310 aaKnown RBP17.32■□□□□ 0.36
CXCL12-207ENST00000488591 RNF26Q9BY78 433 aaPredicted RBP17.32■□□□□ 0.36
CXCL12-207ENST00000488591 WDR11Q9BZH6 1224 aa17.32■□□□□ 0.36
CXCL12-207ENST00000488591 SENP6Q9GZR1 1112 aaPredicted RBP17.32■□□□□ 0.36
CXCL12-207ENST00000488591 GLT8D2Q9H1C3 349 aa17.32■□□□□ 0.36
CXCL12-207ENST00000488591 SLKQ9H2G2 1235 aaPredicted RBP17.32■□□□□ 0.36
CXCL12-207ENST00000488591 NCOA5Q9HCD5 579 aaKnown RBP17.32■□□□□ 0.36
CXCL12-207ENST00000488591 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.31■□□□□ 0.36
CXCL12-207ENST00000488591 COL6A1P12109 1028 aa17.31■□□□□ 0.36
CXCL12-207ENST00000488591 MYCLP12524 364 aaPredicted RBP17.31■□□□□ 0.36
CXCL12-207ENST00000488591 SCG2P13521 617 aa17.31■□□□□ 0.36
CXCL12-207ENST00000488591 SMPD1P17405 629 aa17.31■□□□□ 0.36
CXCL12-207ENST00000488591 AK2P54819 239 aa17.31■□□□□ 0.36
CXCL12-207ENST00000488591 GJA9P57773 515 aa17.31■□□□□ 0.36
CXCL12-207ENST00000488591 TTLL4Q14679 1199 aa17.31■□□□□ 0.36
CXCL12-207ENST00000488591 PGM5Q15124 567 aa17.31■□□□□ 0.36
CXCL12-207ENST00000488591 PFKFB3Q16875 520 aaPredicted RBP17.31■□□□□ 0.36
CXCL12-207ENST00000488591 DUSP28Q4G0W2 176 aa17.31■□□□□ 0.36
CXCL12-207ENST00000488591 USP17L6PQ6QN14 398 aa17.31■□□□□ 0.36
CXCL12-207ENST00000488591 TLK2Q86UE8 772 aa17.31■□□□□ 0.36
CXCL12-207ENST00000488591 PCSK9Q8NBP7 692 aaKnown RBP17.31■□□□□ 0.36
CXCL12-207ENST00000488591 CCDC12Q8WUD4 166 aaPredicted RBP17.31■□□□□ 0.36
CXCL12-207ENST00000488591 PHKBQ93100 1093 aa17.31■□□□□ 0.36
CXCL12-207ENST00000488591 SLC26A6Q9BXS9 759 aa17.31■□□□□ 0.36
CXCL12-207ENST00000488591 UPF3AQ9H1J1 476 aaKnown RBP17.31■□□□□ 0.36
CXCL12-207ENST00000488591 BARHL2Q9NY43 387 aa17.31■□□□□ 0.36
CXCL12-207ENST00000488591 GNEQ9Y223 722 aaKnown RBP17.31■□□□□ 0.36
CXCL12-207ENST00000488591 LRRC37A2A6NM11 1700 aa17.3■□□□□ 0.36
CXCL12-207ENST00000488591 BRCA2P51587 3418 aa17.3■□□□□ 0.36
CXCL12-207ENST00000488591 STXBP3O00186 592 aa17.3■□□□□ 0.36
CXCL12-207ENST00000488591 MEIS2O14770 477 aa17.3■□□□□ 0.36
CXCL12-207ENST00000488591 NKRFO15226 690 aaKnown RBP eCLIP17.3■□□□□ 0.36
CXCL12-207ENST00000488591 DYNC1LI2O43237 492 aaPredicted RBP17.3■□□□□ 0.36
CXCL12-207ENST00000488591 ADCY6O43306 1168 aa17.3■□□□□ 0.36
CXCL12-207ENST00000488591 ADAMTS4O75173 837 aa17.3■□□□□ 0.36
CXCL12-207ENST00000488591 CDKL5O76039 1030 aa17.3■□□□□ 0.36
CXCL12-207ENST00000488591 CCND2P30279 289 aa17.3■□□□□ 0.36
CXCL12-207ENST00000488591 ADCY7P51828 1080 aa17.3■□□□□ 0.36
CXCL12-207ENST00000488591 SSRP1Q08945 709 aaKnown RBP17.3■□□□□ 0.36
CXCL12-207ENST00000488591 NTRK3Q16288 839 aa17.3■□□□□ 0.36
CXCL12-207ENST00000488591 GNASQ5JWF2 1037 aa17.3■□□□□ 0.36
CXCL12-207ENST00000488591 SEPT14Q6ZU15 432 aa17.3■□□□□ 0.36
CXCL12-207ENST00000488591 VSIG10LQ86VR7 867 aa17.3■□□□□ 0.36
CXCL12-207ENST00000488591 EHMT1Q9H9B1 1298 aa17.3■□□□□ 0.36
CXCL12-207ENST00000488591 TPCN1Q9ULQ1 816 aa17.3■□□□□ 0.36
CXCL12-207ENST00000488591 SMCO2A6NFE2 343 aa17.29■□□□□ 0.36
CXCL12-207ENST00000488591 SPDYE3A6NKU9 549 aa17.29■□□□□ 0.36
CXCL12-207ENST00000488591 ZEB2O60315 1214 aa17.29■□□□□ 0.36
CXCL12-207ENST00000488591 EVI5O60447 810 aa17.29■□□□□ 0.36
CXCL12-207ENST00000488591 TXNP10599 105 aaKnown RBP17.29■□□□□ 0.36
CXCL12-207ENST00000488591 CST5P28325 142 aaPredicted RBP17.29■□□□□ 0.36
CXCL12-207ENST00000488591 RBM25P49756 843 aaKnown RBP17.29■□□□□ 0.36
CXCL12-207ENST00000488591 KLHDC9Q8NEP7 349 aa17.29■□□□□ 0.36
CXCL12-207ENST00000488591 RIC8AQ9NPQ8 531 aa17.29■□□□□ 0.36
CXCL12-207ENST00000488591 PHF24Q9UPV7 400 aa17.29■□□□□ 0.36
CXCL12-207ENST00000488591 NR2E3Q9Y5X4 410 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms