RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 LPAR1Q92633 364 aa14.45□□□□□ -0.1
NELFE-209ENST00000488426 WDR18Q9BV38 432 aa14.45□□□□□ -0.1
NELFE-209ENST00000488426 RBSNQ9H1K0 784 aa14.45□□□□□ -0.1
NELFE-209ENST00000488426 PRR12Q9ULL5 1215 aa14.45□□□□□ -0.1
NELFE-209ENST00000488426 PCDHA1Q9Y5I3 950 aa14.45□□□□□ -0.1
NELFE-209ENST00000488426 LAD1O00515 517 aa14.44□□□□□ -0.1
NELFE-209ENST00000488426 OSBPP22059 807 aa14.44□□□□□ -0.1
NELFE-209ENST00000488426 MCM7P33993 719 aa14.44□□□□□ -0.1
NELFE-209ENST00000488426 CLK2P49760 499 aaKnown RBP14.44□□□□□ -0.1
NELFE-209ENST00000488426 MCTP2Q6DN12 878 aa14.44□□□□□ -0.1
NELFE-209ENST00000488426 NEK8Q86SG6 692 aa14.44□□□□□ -0.1
NELFE-209ENST00000488426 FBXO11Q86XK2 927 aa14.44□□□□□ -0.1
NELFE-209ENST00000488426 ANKRD13CQ8N6S4 541 aa14.44□□□□□ -0.1
NELFE-209ENST00000488426 EMILIN3Q9NT22 766 aa14.44□□□□□ -0.1
NELFE-209ENST00000488426 FEM1BQ9UK73 627 aa14.44□□□□□ -0.1
NELFE-209ENST00000488426 GABRQQ9UN88 632 aa14.44□□□□□ -0.1
NELFE-209ENST00000488426 ARMC5Q96C12 935 aa14.44□□□□□ -0.1
NELFE-209ENST00000488426 SDF4Q9BRK5 362 aa14.44□□□□□ -0.1
NELFE-209ENST00000488426 ASCC2Q9H1I8 757 aaPredicted RBP14.44□□□□□ -0.1
NELFE-209ENST00000488426 PSTPIP2Q9H939 334 aa14.44□□□□□ -0.1
NELFE-209ENST00000488426 BIN2Q9UBW5 565 aaPredicted RBP14.44□□□□□ -0.1
NELFE-209ENST00000488426 KCNH3Q9ULD8 1083 aa14.44□□□□□ -0.1
NELFE-209ENST00000488426 SLC45A1Q9Y2W3 748 aa14.44□□□□□ -0.1
NELFE-209ENST00000488426 WDR46O15213 610 aaKnown RBP14.43□□□□□ -0.1
NELFE-209ENST00000488426 GRIN1Q05586 938 aa14.43□□□□□ -0.1
NELFE-209ENST00000488426 TYRO3Q06418 890 aa14.43□□□□□ -0.1
NELFE-209ENST00000488426 ZYXQ15942 572 aaKnown RBP14.43□□□□□ -0.1
NELFE-209ENST00000488426 JAKMIP3Q5VZ66 844 aa14.43□□□□□ -0.1
NELFE-209ENST00000488426 SASS6Q6UVJ0 657 aa14.43□□□□□ -0.1
NELFE-209ENST00000488426 CKAP2LQ8IYA6 745 aa14.43□□□□□ -0.1
NELFE-209ENST00000488426 ELOA2Q8IYF1 753 aaPredicted RBP14.43□□□□□ -0.1
NELFE-209ENST00000488426 C4orf32Q8N8J7 132 aa14.43□□□□□ -0.1
NELFE-209ENST00000488426 PROCA1Q8NCQ7 364 aaPredicted RBP14.43□□□□□ -0.1
NELFE-209ENST00000488426 TBCKQ8TEA7 893 aa14.43□□□□□ -0.1
NELFE-209ENST00000488426 ZNF333Q96JL9 665 aa14.43□□□□□ -0.1
NELFE-209ENST00000488426 P2RX7Q99572 595 aaKnown RBP14.43□□□□□ -0.1
NELFE-209ENST00000488426 CSRNP2Q9H175 543 aa14.43□□□□□ -0.1
NELFE-209ENST00000488426 AS3MTQ9HBK9 375 aa14.43□□□□□ -0.1
NELFE-209ENST00000488426 MRVI1Q9Y6F6 885 aa14.43□□□□□ -0.1
NELFE-209ENST00000488426 PRPHP41219 470 aa14.42□□□□□ -0.1
NELFE-209ENST00000488426 USP14P54578 494 aa14.42□□□□□ -0.1
NELFE-209ENST00000488426 PRKCZQ05513 592 aa14.42□□□□□ -0.1
NELFE-209ENST00000488426 KIF22Q14807 665 aa14.42□□□□□ -0.1
NELFE-209ENST00000488426 SMCR8Q8TEV9 937 aaPredicted RBP14.42□□□□□ -0.1
NELFE-209ENST00000488426 RANBP17Q9H2T7 1088 aaKnown RBP14.42□□□□□ -0.1
NELFE-209ENST00000488426 RTN4Q9NQC3 1192 aaKnown RBP14.42□□□□□ -0.1
NELFE-209ENST00000488426 SRRDQ9UH36 339 aa14.42□□□□□ -0.1
NELFE-209ENST00000488426 EN2P19622 333 aaPredicted RBP14.42□□□□□ -0.1
NELFE-209ENST00000488426 LONP1P36776 959 aaKnown RBP14.42□□□□□ -0.1
NELFE-209ENST00000488426 AP3B2Q13367 1082 aa14.42□□□□□ -0.1
NELFE-209ENST00000488426 SLC9C1Q4G0N8 1177 aa14.42□□□□□ -0.1
NELFE-209ENST00000488426 TXNRD2Q9NNW7 524 aa14.42□□□□□ -0.1
NELFE-209ENST00000488426 TMEM260Q9NX78 707 aa14.42□□□□□ -0.1
NELFE-209ENST00000488426 LOC285556D6RIA3 1793 aa14.41□□□□□ -0.1
NELFE-209ENST00000488426 CAVIN2O95810 425 aa14.41□□□□□ -0.1
NELFE-209ENST00000488426 MTFR1Q15390 333 aa14.41□□□□□ -0.1
NELFE-209ENST00000488426 LETM2Q2VYF4 491 aa14.41□□□□□ -0.1
NELFE-209ENST00000488426 NAP1L4Q99733 375 aaKnown RBP14.41□□□□□ -0.1
NELFE-209ENST00000488426 VWA3AA6NCI4 1184 aa14.4□□□□□ -0.1
NELFE-209ENST00000488426 NEMFO60524 1076 aa14.4□□□□□ -0.1
NELFE-209ENST00000488426 CCNT1O60563 726 aaKnown RBP14.4□□□□□ -0.1
NELFE-209ENST00000488426 UBE2SQ16763 222 aa14.4□□□□□ -0.1
NELFE-209ENST00000488426 SPECC1Q5M775 1068 aa14.4□□□□□ -0.1
NELFE-209ENST00000488426 KRBA2Q6ZNG9 492 aa14.4□□□□□ -0.1
NELFE-209ENST00000488426 KIFC2Q96AC6 838 aa14.4□□□□□ -0.1
NELFE-209ENST00000488426 PYM1Q9BRP8 204 aaKnown RBP14.4□□□□□ -0.1
NELFE-209ENST00000488426 HOOK1Q9UJC3 728 aaKnown RBP14.4□□□□□ -0.1
NELFE-209ENST00000488426 MGAMO43451 1857 aa14.4□□□□□ -0.1
NELFE-209ENST00000488426 MYH7BA7E2Y1 1941 aa14.4□□□□□ -0.1
NELFE-209ENST00000488426 HOXA7P31268 230 aaPredicted RBP14.4□□□□□ -0.1
NELFE-209ENST00000488426 SNAP25P60880 206 aa14.4□□□□□ -0.1
NELFE-209ENST00000488426 UVSSAQ2YD98 709 aa14.4□□□□□ -0.1
NELFE-209ENST00000488426 Q3C1V9 767 aa14.4□□□□□ -0.1
NELFE-209ENST00000488426 KANK3Q6NY19 840 aa14.4□□□□□ -0.1
NELFE-209ENST00000488426 DTHD1Q6ZMT9 781 aa14.4□□□□□ -0.1
NELFE-209ENST00000488426 CNNM3Q8NE01 707 aa14.4□□□□□ -0.1
NELFE-209ENST00000488426 CCDC34Q96HJ3 373 aa14.4□□□□□ -0.1
NELFE-209ENST00000488426 KIAA1468Q9P260 1216 aa14.4□□□□□ -0.1
NELFE-209ENST00000488426 USP25Q9UHP3 1055 aa14.4□□□□□ -0.1
NELFE-209ENST00000488426 MYPNQ86TC9 1320 aa14.4□□□□□ -0.1
NELFE-209ENST00000488426 C19orf81C9J6K1 198 aa14.39□□□□□ -0.11
NELFE-209ENST00000488426 FOSP01100 380 aaPredicted RBP14.39□□□□□ -0.11
NELFE-209ENST00000488426 OR52Z1P0C646 297 aa14.39□□□□□ -0.11
NELFE-209ENST00000488426 GCFC2P16383 781 aaKnown RBP14.39□□□□□ -0.11
NELFE-209ENST00000488426 FLT3LGP49771 235 aa14.39□□□□□ -0.11
NELFE-209ENST00000488426 ARHGEF6Q15052 776 aa14.39□□□□□ -0.11
NELFE-209ENST00000488426 STX1AQ16623 288 aa14.39□□□□□ -0.11
NELFE-209ENST00000488426 USH1GQ495M9 461 aa14.39□□□□□ -0.11
NELFE-209ENST00000488426 PPP4R3AQ6IN85 833 aa14.39□□□□□ -0.11
NELFE-209ENST00000488426 PRPF38AQ8NAV1 312 aaKnown RBP14.39□□□□□ -0.11
NELFE-209ENST00000488426 ANP32BQ92688 251 aaKnown RBP14.39□□□□□ -0.11
NELFE-209ENST00000488426 SYMPKQ92797 1274 aaKnown RBP14.39□□□□□ -0.11
NELFE-209ENST00000488426 C12orf42Q96LP6 360 aa14.39□□□□□ -0.11
NELFE-209ENST00000488426 TMEM60Q9H2L4 133 aa14.39□□□□□ -0.11
NELFE-209ENST00000488426 TMOD4Q9NZQ9 345 aa14.39□□□□□ -0.11
NELFE-209ENST00000488426 RBPJLQ9UBG7 517 aa14.39□□□□□ -0.11
NELFE-209ENST00000488426 PARP14Q460N5 1801 aa14.39□□□□□ -0.11
NELFE-209ENST00000488426 ABCB11O95342 1321 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 PIK3CDO00329 1044 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 MEIS2O14770 477 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 351 ms