RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 GDF6Q6KF10 455 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-213ENST00000488386 CDC42EP5Q6NZY7 148 aa7.28□□□□□ -1.24
CDHR3-213ENST00000488386 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-213ENST00000488386 TTC9Q92623 222 aa7.28□□□□□ -1.24
CDHR3-213ENST00000488386 ZDHHC15Q96MV8 337 aa7.28□□□□□ -1.24
CDHR3-213ENST00000488386 PBX4Q9BYU1 374 aa7.28□□□□□ -1.24
CDHR3-213ENST00000488386 PPP2R3BQ9Y5P8 575 aa7.28□□□□□ -1.24
CDHR3-213ENST00000488386 RNF225M0QZC1 329 aaPredicted RBP7.27□□□□□ -1.25
CDHR3-213ENST00000488386 CPNE3O75131 537 aaKnown RBP7.27□□□□□ -1.25
CDHR3-213ENST00000488386 SURF6O75683 361 aaKnown RBP7.27□□□□□ -1.25
CDHR3-213ENST00000488386 LDHBP07195 334 aaKnown RBP7.27□□□□□ -1.25
CDHR3-213ENST00000488386 TNNI2P48788 182 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 KCNMA1Q12791 1236 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 G3BP1Q13283 466 aaKnown RBP eCLIP7.27□□□□□ -1.25
CDHR3-213ENST00000488386 OS9Q13438 667 aaPredicted RBP7.27□□□□□ -1.25
CDHR3-213ENST00000488386 TNFAIP1Q13829 316 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 VGLL4Q14135 290 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 HHIPL2Q6UWX4 724 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 GALNT12Q8IXK2 581 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 WDR66Q8TBY9 1149 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 ZNF384Q8TF68 577 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 ZNF296Q8WUU4 475 aaPredicted RBP7.27□□□□□ -1.25
CDHR3-213ENST00000488386 ZKSCAN4Q969J2 545 aaPredicted RBP7.27□□□□□ -1.25
CDHR3-213ENST00000488386 PMEPA1Q969W9 287 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 OPTNQ96CV9 577 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 SPACA7Q96KW9 195 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 POP1Q99575 1024 aaKnown RBP7.27□□□□□ -1.25
CDHR3-213ENST00000488386 DBNDD2Q9BQY9 259 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 LACRTQ9GZZ8 138 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 RBSNQ9H1K0 784 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 NPHS2Q9NP85 383 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 USP40Q9NVE5 1235 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 GNL3LQ9NVN8 582 aaKnown RBP7.27□□□□□ -1.25
CDHR3-213ENST00000488386 SAGE1Q9NXZ1 904 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 TMOD2Q9NZR1 351 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 HMG20BQ9P0W2 317 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 DENND2AQ9ULE3 1009 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 ZSWIM8A7E2V4 1837 aa7.27□□□□□ -1.25
CDHR3-213ENST00000488386 EDN3P14138 238 aa7.26□□□□□ -1.25
CDHR3-213ENST00000488386 MCAMP43121 646 aa7.26□□□□□ -1.25
CDHR3-213ENST00000488386 TM4SF4P48230 202 aa7.26□□□□□ -1.25
CDHR3-213ENST00000488386 ATP8B2P98198 1209 aa7.26□□□□□ -1.25
CDHR3-213ENST00000488386 HDLBPQ00341 1268 aaKnown RBP7.26□□□□□ -1.25
CDHR3-213ENST00000488386 CAP1Q01518 475 aa7.26□□□□□ -1.25
CDHR3-213ENST00000488386 PICALMQ13492 652 aa7.26□□□□□ -1.25
CDHR3-213ENST00000488386 TNNI3KQ59H18 835 aa7.26□□□□□ -1.25
CDHR3-213ENST00000488386 GORABQ5T7V8 394 aa7.26□□□□□ -1.25
CDHR3-213ENST00000488386 C20orf194Q5TEA3 1177 aa7.26□□□□□ -1.25
CDHR3-213ENST00000488386 DNAJC14Q6Y2X3 702 aaPredicted RBP7.26□□□□□ -1.25
CDHR3-213ENST00000488386 DZIP1Q86YF9 867 aaKnown RBP7.26□□□□□ -1.25
CDHR3-213ENST00000488386 DMRTC2Q8IXT2 367 aaPredicted RBP7.26□□□□□ -1.25
CDHR3-213ENST00000488386 ANKRD13AQ8IZ07 590 aa7.26□□□□□ -1.25
CDHR3-213ENST00000488386 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.26□□□□□ -1.25
CDHR3-213ENST00000488386 WRNIP1Q96S55 665 aa7.26□□□□□ -1.25
CDHR3-213ENST00000488386 OSMRQ99650 979 aa7.26□□□□□ -1.25
CDHR3-213ENST00000488386 PTPN18Q99952 460 aa7.26□□□□□ -1.25
CDHR3-213ENST00000488386 CCDC8Q9H0W5 538 aaPredicted RBP7.26□□□□□ -1.25
CDHR3-213ENST00000488386 DDX4Q9NQI0 724 aaKnown RBP7.26□□□□□ -1.25
CDHR3-213ENST00000488386 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.26□□□□□ -1.25
CDHR3-213ENST00000488386 HDAC5Q9UQL6 1122 aa7.26□□□□□ -1.25
CDHR3-213ENST00000488386 EXOC6BQ9Y2D4 811 aa7.26□□□□□ -1.25
CDHR3-213ENST00000488386 FPGT-TNNI3KV9GXZ4 949 aa7.26□□□□□ -1.25
CDHR3-213ENST00000488386 DOCK2Q92608 1830 aa7.26□□□□□ -1.25
CDHR3-213ENST00000488386 MAST3O60307 1309 aa7.26□□□□□ -1.25
CDHR3-213ENST00000488386 LAMB1P07942 1786 aa7.25□□□□□ -1.25
CDHR3-213ENST00000488386 A0A1W2PP55 124 aa7.25□□□□□ -1.25
CDHR3-213ENST00000488386 SMNDC1O75940 238 aaKnown RBP eCLIP7.25□□□□□ -1.25
CDHR3-213ENST00000488386 P4HBP07237 508 aaKnown RBP7.25□□□□□ -1.25
CDHR3-213ENST00000488386 BTDP43251 543 aa7.25□□□□□ -1.25
CDHR3-213ENST00000488386 RGS3P49796 1198 aa7.25□□□□□ -1.25
CDHR3-213ENST00000488386 SOX10P56693 466 aa7.25□□□□□ -1.25
CDHR3-213ENST00000488386 MECOMQ03112 1051 aa7.25□□□□□ -1.25
CDHR3-213ENST00000488386 SREBF2Q12772 1141 aa7.25□□□□□ -1.25
CDHR3-213ENST00000488386 TTC39AQ5SRH9 613 aa7.25□□□□□ -1.25
CDHR3-213ENST00000488386 CEP85Q6P2H3 762 aa7.25□□□□□ -1.25
CDHR3-213ENST00000488386 CCDC84Q86UT8 332 aaPredicted RBP7.25□□□□□ -1.25
CDHR3-213ENST00000488386 ZSCAN29Q8IWY8 852 aaPredicted RBP7.25□□□□□ -1.25
CDHR3-213ENST00000488386 SSH3Q8TE77 659 aa7.25□□□□□ -1.25
CDHR3-213ENST00000488386 BRI3BPQ8WY22 251 aa7.25□□□□□ -1.25
CDHR3-213ENST00000488386 RAI14Q9P0K7 980 aa7.25□□□□□ -1.25
CDHR3-213ENST00000488386 AKAP2Q9Y2D5 859 aa7.25□□□□□ -1.25
CDHR3-213ENST00000488386 SUGT1Q9Y2Z0 365 aa7.25□□□□□ -1.25
CDHR3-213ENST00000488386 SNCAIPQ9Y6H5 919 aa7.25□□□□□ -1.25
CDHR3-213ENST00000488386 SALL1Q9NSC2 1324 aa7.25□□□□□ -1.25
CDHR3-213ENST00000488386 A0A0A0MRY4 1105 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 CCL15-CCL14A0A0B4J2E2 113 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 PNMA6FA0A0J9YX94 578 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 DDTLA6NHG4 134 aaPredicted RBP7.24□□□□□ -1.25
CDHR3-213ENST00000488386 MANSC4A6NHS7 340 aaPredicted RBP7.24□□□□□ -1.25
CDHR3-213ENST00000488386 METTL12A8MUP2 240 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 PDE2AO00408 941 aaPredicted RBP7.24□□□□□ -1.25
CDHR3-213ENST00000488386 WDHD1O75717 1129 aaPredicted RBP7.24□□□□□ -1.25
CDHR3-213ENST00000488386 ZBTB48P10074 688 aaPredicted RBP7.24□□□□□ -1.25
CDHR3-213ENST00000488386 EPHA1P21709 976 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 MAPK8P45983 427 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 CRHR2Q13324 411 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 MVPQ14764 893 aaKnown RBP7.24□□□□□ -1.25
CDHR3-213ENST00000488386 ENOX2Q16206 610 aaKnown RBP7.24□□□□□ -1.25
CDHR3-213ENST00000488386 CCL15Q16663 113 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 SLC4A8Q2Y0W8 1093 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms