RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 TIGD5Q53EQ6 642 aa11.02□□□□□ -0.65
COL17A1-207ENST00000488320 LRRC8DQ7L1W4 858 aa11.02□□□□□ -0.65
COL17A1-207ENST00000488320 ADHFE1Q8IWW8 467 aa11.02□□□□□ -0.65
COL17A1-207ENST00000488320 BANK1Q8NDB2 785 aa11.02□□□□□ -0.65
COL17A1-207ENST00000488320 MPHOSPH6Q99547 160 aaKnown RBP11.02□□□□□ -0.65
COL17A1-207ENST00000488320 PUS7LQ9H0K6 701 aaKnown RBP11.02□□□□□ -0.65
COL17A1-207ENST00000488320 CLDND1Q9NY35 253 aa11.02□□□□□ -0.65
COL17A1-207ENST00000488320 MTMR4Q9NYA4 1195 aa11.02□□□□□ -0.65
COL17A1-207ENST00000488320 CCPG1Q9ULG6 757 aa11.02□□□□□ -0.65
COL17A1-207ENST00000488320 INSL6Q9Y581 213 aa11.02□□□□□ -0.65
COL17A1-207ENST00000488320 IGKV6D-41A0A0C4DH26 115 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 PTPDC1A2A3K4 754 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 C19orf67A6NJJ6 358 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 NKRFO15226 690 aaKnown RBP eCLIP11.01□□□□□ -0.65
COL17A1-207ENST00000488320 TSPY3P0CV98 308 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 TSPY8P0CW00 308 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 MCCP23508 829 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 IRS1P35568 1242 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 ALDH5A1P51649 535 aaPredicted RBP11.01□□□□□ -0.65
COL17A1-207ENST00000488320 FOXK2Q01167 660 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 PDE4DQ08499 809 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 GPM6BQ13491 265 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 BAATQ14032 418 aaPredicted RBP11.01□□□□□ -0.65
COL17A1-207ENST00000488320 PPP2R5BQ15173 497 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 TCEAL5Q5H9L2 206 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 CEP85Q6P2H3 762 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 KCTD1Q719H9 257 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 PRSS33Q8NF86 280 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 MORC4Q8TE76 937 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 PABPC5Q96DU9 382 aaKnown RBP11.01□□□□□ -0.65
COL17A1-207ENST00000488320 KIF1BPQ96EK5 621 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 PRRX2Q99811 253 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 MUTYHQ9UIF7 546 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 SYNPO2Q9UMS6 1093 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 SCN10AQ9Y5Y9 1956 aa11.01□□□□□ -0.65
COL17A1-207ENST00000488320 RBM47A0AV96 593 aaKnown RBP11□□□□□ -0.65
COL17A1-207ENST00000488320 A6NJR5 290 aa11□□□□□ -0.65
COL17A1-207ENST00000488320 GFRA3O60609 400 aa11□□□□□ -0.65
COL17A1-207ENST00000488320 APPP05067 770 aa11□□□□□ -0.65
COL17A1-207ENST00000488320 TDO2P48775 406 aa11□□□□□ -0.65
COL17A1-207ENST00000488320 PDE4BQ07343 736 aa11□□□□□ -0.65
COL17A1-207ENST00000488320 GPNMBQ14956 572 aa11□□□□□ -0.65
COL17A1-207ENST00000488320 EPC2Q52LR7 807 aa11□□□□□ -0.65
COL17A1-207ENST00000488320 IER5LQ5T953 404 aa11□□□□□ -0.65
COL17A1-207ENST00000488320 SUGP1Q8IWZ8 645 aaKnown RBP11□□□□□ -0.65
COL17A1-207ENST00000488320 COPS5Q92905 334 aa11□□□□□ -0.65
COL17A1-207ENST00000488320 PBXIP1Q96AQ6 731 aa11□□□□□ -0.65
COL17A1-207ENST00000488320 SAMD11Q96NU1 681 aa11□□□□□ -0.65
COL17A1-207ENST00000488320 POP1Q99575 1024 aaKnown RBP11□□□□□ -0.65
COL17A1-207ENST00000488320 MTMR7Q9Y216 660 aa11□□□□□ -0.65
COL17A1-207ENST00000488320 USP34Q70CQ2 3546 aa10.99□□□□□ -0.65
COL17A1-207ENST00000488320 LOC102724159A0A0B4J2E5 919 aa10.99□□□□□ -0.65
COL17A1-207ENST00000488320 GSG1L2A8MUP6 293 aa10.99□□□□□ -0.65
COL17A1-207ENST00000488320 NBNO60934 754 aa10.99□□□□□ -0.65
COL17A1-207ENST00000488320 CXCL10P02778 98 aa10.99□□□□□ -0.65
COL17A1-207ENST00000488320 AMHP03971 560 aa10.99□□□□□ -0.65
COL17A1-207ENST00000488320 TXNP10599 105 aaKnown RBP10.99□□□□□ -0.65
COL17A1-207ENST00000488320 CKBP12277 381 aa10.99□□□□□ -0.65
COL17A1-207ENST00000488320 ATP5JP18859 108 aa10.99□□□□□ -0.65
COL17A1-207ENST00000488320 CALML3P27482 149 aa10.99□□□□□ -0.65
COL17A1-207ENST00000488320 PWP2Q15269 919 aaKnown RBP10.99□□□□□ -0.65
COL17A1-207ENST00000488320 CLUL1Q15846 466 aa10.99□□□□□ -0.65
COL17A1-207ENST00000488320 PKN1Q16512 942 aa10.99□□□□□ -0.65
COL17A1-207ENST00000488320 RCSD1Q6JBY9 416 aa10.99□□□□□ -0.65
COL17A1-207ENST00000488320 GDF6Q6KF10 455 aaPredicted RBP10.99□□□□□ -0.65
COL17A1-207ENST00000488320 GIMAP6Q6P9H5 292 aa10.99□□□□□ -0.65
COL17A1-207ENST00000488320 MYOCDQ8IZQ8 938 aa10.99□□□□□ -0.65
COL17A1-207ENST00000488320 SCFD2Q8WU76 684 aa10.99□□□□□ -0.65
COL17A1-207ENST00000488320 EDAQ92838 391 aa10.99□□□□□ -0.65
COL17A1-207ENST00000488320 GMCL1Q96IK5 515 aa10.99□□□□□ -0.65
COL17A1-207ENST00000488320 STRBPQ96SI9 672 aaKnown RBP10.99□□□□□ -0.65
COL17A1-207ENST00000488320 HAUS7Q99871 368 aa10.99□□□□□ -0.65
COL17A1-207ENST00000488320 NSUN3Q9H649 340 aaKnown RBP10.99□□□□□ -0.65
COL17A1-207ENST00000488320 PRR12Q9ULL5 1215 aa10.99□□□□□ -0.65
COL17A1-207ENST00000488320 MYH7P12883 1935 aa10.99□□□□□ -0.65
COL17A1-207ENST00000488320 ZNF318Q5VUA4 2279 aa10.98□□□□□ -0.65
COL17A1-207ENST00000488320 B4DLN1 442 aa10.98□□□□□ -0.65
COL17A1-207ENST00000488320 NCK2O43639 380 aa10.98□□□□□ -0.65
COL17A1-207ENST00000488320 PLA2G6O60733 806 aa10.98□□□□□ -0.65
COL17A1-207ENST00000488320 ICAM1P05362 532 aa10.98□□□□□ -0.65
COL17A1-207ENST00000488320 MRPL12P52815 198 aaKnown RBP10.98□□□□□ -0.65
COL17A1-207ENST00000488320 TFAP4Q01664 338 aa10.98□□□□□ -0.65
COL17A1-207ENST00000488320 TCTN1Q2MV58 587 aa10.98□□□□□ -0.65
COL17A1-207ENST00000488320 HERC4Q5GLZ8 1057 aaPredicted RBP10.98□□□□□ -0.65
COL17A1-207ENST00000488320 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.98□□□□□ -0.65
COL17A1-207ENST00000488320 RPAINQ86UA6 219 aa10.98□□□□□ -0.65
COL17A1-207ENST00000488320 RNF135Q8IUD6 432 aa10.98□□□□□ -0.65
COL17A1-207ENST00000488320 C7orf31Q8N865 590 aa10.98□□□□□ -0.65
COL17A1-207ENST00000488320 NEDD1Q8NHV4 660 aa10.98□□□□□ -0.65
COL17A1-207ENST00000488320 STX8Q9UNK0 236 aa10.98□□□□□ -0.65
COL17A1-207ENST00000488320 TMEM221A6NGB7 291 aa10.97□□□□□ -0.65
COL17A1-207ENST00000488320 H3BNC9 293 aa10.97□□□□□ -0.65
COL17A1-207ENST00000488320 M0R296 226 aa10.97□□□□□ -0.65
COL17A1-207ENST00000488320 STXBP3O00186 592 aa10.97□□□□□ -0.65
COL17A1-207ENST00000488320 LGR5O75473 907 aa10.97□□□□□ -0.65
COL17A1-207ENST00000488320 UPP2O95045 317 aa10.97□□□□□ -0.65
COL17A1-207ENST00000488320 SLC3A2P08195 630 aaKnown RBP10.97□□□□□ -0.65
COL17A1-207ENST00000488320 CASTP20810 708 aaKnown RBP10.97□□□□□ -0.65
COL17A1-207ENST00000488320 CCDC96Q2M329 555 aa10.97□□□□□ -0.65
COL17A1-207ENST00000488320 PPP4R3BQ5MIZ7 849 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms