RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 CHST3Q7LGC8 479 aa22.5■■□□□ 1.19
CD55-209ENST00000488171 RALYLQ86SE5 291 aaKnown RBP22.5■■□□□ 1.19
CD55-209ENST00000488171 NSUN6Q8TEA1 469 aaKnown RBP22.5■■□□□ 1.19
CD55-209ENST00000488171 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.5■■□□□ 1.19
CD55-209ENST00000488171 AMNQ9BXJ7 453 aa22.5■■□□□ 1.19
CD55-209ENST00000488171 TRPV6Q9H1D0 765 aa22.5■■□□□ 1.19
CD55-209ENST00000488171 POLR3EQ9NVU0 708 aa22.5■■□□□ 1.19
CD55-209ENST00000488171 RBM8AQ9Y5S9 174 aaKnown RBP22.5■■□□□ 1.19
CD55-209ENST00000488171 TXNP10599 105 aaKnown RBP22.5■■□□□ 1.19
CD55-209ENST00000488171 CYP2C18P33260 490 aa22.5■■□□□ 1.19
CD55-209ENST00000488171 ANTXR2P58335 489 aa22.5■■□□□ 1.19
CD55-209ENST00000488171 CCDC62Q6P9F0 684 aa22.5■■□□□ 1.19
CD55-209ENST00000488171 TMEM199Q8N511 208 aa22.5■■□□□ 1.19
CD55-209ENST00000488171 RMDN3Q96TC7 470 aa22.5■■□□□ 1.19
CD55-209ENST00000488171 A6NJR5 290 aa22.49■■□□□ 1.19
CD55-209ENST00000488171 ZBTB5O15062 677 aa22.49■■□□□ 1.19
CD55-209ENST00000488171 MYL3P08590 195 aa22.49■■□□□ 1.19
CD55-209ENST00000488171 HSD17B4P51659 736 aa22.49■■□□□ 1.19
CD55-209ENST00000488171 GHRHRQ02643 423 aa22.49■■□□□ 1.19
CD55-209ENST00000488171 TROAPQ12815 778 aa22.49■■□□□ 1.19
CD55-209ENST00000488171 WTAPQ15007 396 aa22.49■■□□□ 1.19
CD55-209ENST00000488171 TMEM240Q5SV17 173 aa22.49■■□□□ 1.19
CD55-209ENST00000488171 MB21D2Q8IYB1 491 aaPredicted RBP22.49■■□□□ 1.19
CD55-209ENST00000488171 HIPK3Q9H422 1215 aa22.49■■□□□ 1.19
CD55-209ENST00000488171 UMODL1Q5DID0 1318 aa22.49■■□□□ 1.19
CD55-209ENST00000488171 ERICH2A1L162 156 aa22.48■■□□□ 1.19
CD55-209ENST00000488171 CFBP00751 764 aa22.48■■□□□ 1.19
CD55-209ENST00000488171 TTLL4Q14679 1199 aa22.48■■□□□ 1.19
CD55-209ENST00000488171 IGDCC4Q8TDY8 1250 aa22.48■■□□□ 1.19
CD55-209ENST00000488171 IWS1Q96ST2 819 aa22.48■■□□□ 1.19
CD55-209ENST00000488171 MTG1Q9BT17 334 aaPredicted RBP22.48■■□□□ 1.19
CD55-209ENST00000488171 ALDH8A1Q9H2A2 487 aaPredicted RBP22.48■■□□□ 1.19
CD55-209ENST00000488171 RIOX1Q9H6W3 641 aa22.48■■□□□ 1.19
CD55-209ENST00000488171 CYTH3O43739 400 aa22.47■■□□□ 1.19
CD55-209ENST00000488171 ACRP10323 421 aa22.47■■□□□ 1.19
CD55-209ENST00000488171 SART3Q15020 963 aaKnown RBP22.47■■□□□ 1.19
CD55-209ENST00000488171 STXBP2Q15833 593 aa22.47■■□□□ 1.19
CD55-209ENST00000488171 SEPT14Q6ZU15 432 aa22.47■■□□□ 1.19
CD55-209ENST00000488171 NOC4LQ9BVI4 516 aaKnown RBP22.47■■□□□ 1.19
CD55-209ENST00000488171 LSG1Q9H089 658 aaKnown RBP22.47■■□□□ 1.19
CD55-209ENST00000488171 TTYH1Q9H313 450 aaPredicted RBP22.47■■□□□ 1.19
CD55-209ENST00000488171 SEMA6BQ9H3T3 888 aa22.47■■□□□ 1.19
CD55-209ENST00000488171 PCDHA1Q9Y5I3 950 aa22.47■■□□□ 1.19
CD55-209ENST00000488171 KIAA1217Q5T5P2 1943 aa22.47■■□□□ 1.19
CD55-209ENST00000488171 SCN10AQ9Y5Y9 1956 aa22.47■■□□□ 1.19
CD55-209ENST00000488171 EIF2AK2P19525 551 aaKnown RBP22.46■■□□□ 1.19
CD55-209ENST00000488171 BRDTQ58F21 947 aaPredicted RBP22.46■■□□□ 1.19
CD55-209ENST00000488171 TMEM67Q5HYA8 995 aa22.46■■□□□ 1.19
CD55-209ENST00000488171 RASIP1Q5U651 963 aa22.46■■□□□ 1.19
CD55-209ENST00000488171 ARHGEF16Q5VV41 709 aa22.46■■□□□ 1.19
CD55-209ENST00000488171 HOMER1Q86YM7 354 aa22.46■■□□□ 1.19
CD55-209ENST00000488171 SLC17A8Q8NDX2 589 aa22.46■■□□□ 1.19
CD55-209ENST00000488171 PIGSQ96S52 555 aa22.46■■□□□ 1.19
CD55-209ENST00000488171 GPHNQ9NQX3 736 aaPredicted RBP22.46■■□□□ 1.19
CD55-209ENST00000488171 PXMP2Q9NR77 195 aa22.46■■□□□ 1.19
CD55-209ENST00000488171 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.45■■□□□ 1.18
CD55-209ENST00000488171 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.45■■□□□ 1.18
CD55-209ENST00000488171 KPNA6O60684 536 aa22.45■■□□□ 1.18
CD55-209ENST00000488171 LY6KQ17RY6 165 aa22.45■■□□□ 1.18
CD55-209ENST00000488171 ZNF365Q70YC5 407 aa22.45■■□□□ 1.18
CD55-209ENST00000488171 WNT8AQ9H1J5 351 aa22.45■■□□□ 1.18
CD55-209ENST00000488171 IL23AQ9NPF7 189 aa22.45■■□□□ 1.18
CD55-209ENST00000488171 TRMT13Q9NUP7 481 aaKnown RBP22.45■■□□□ 1.18
CD55-209ENST00000488171 NR3C2P08235 984 aa22.44■■□□□ 1.18
CD55-209ENST00000488171 ARHGAP1Q07960 439 aa22.44■■□□□ 1.18
CD55-209ENST00000488171 NBPF20Q3BBV1 942 aa22.44■■□□□ 1.18
CD55-209ENST00000488171 PSRC1Q6PGN9 363 aaPredicted RBP22.44■■□□□ 1.18
CD55-209ENST00000488171 SKAP1Q86WV1 359 aa22.44■■□□□ 1.18
CD55-209ENST00000488171 PPP1R13LQ8WUF5 828 aa22.44■■□□□ 1.18
CD55-209ENST00000488171 CDX2Q99626 313 aaPredicted RBP22.44■■□□□ 1.18
CD55-209ENST00000488171 ESYT1Q9BSJ8 1104 aa22.44■■□□□ 1.18
CD55-209ENST00000488171 MAP3K20Q9NYL2 800 aaKnown RBP22.44■■□□□ 1.18
CD55-209ENST00000488171 EIF3JO75822 258 aaKnown RBP22.43■■□□□ 1.18
CD55-209ENST00000488171 CCL23P55773 120 aa22.43■■□□□ 1.18
CD55-209ENST00000488171 COL9A3Q14050 684 aaPredicted RBP22.43■■□□□ 1.18
CD55-209ENST00000488171 CATIPQ7Z7H3 387 aa22.43■■□□□ 1.18
CD55-209ENST00000488171 AFG1LQ8WV93 481 aa22.43■■□□□ 1.18
CD55-209ENST00000488171 LY9Q9HBG7 655 aa22.43■■□□□ 1.18
CD55-209ENST00000488171 PNMA6FA0A0J9YX94 578 aa22.42■■□□□ 1.18
CD55-209ENST00000488171 GH1P01241 217 aa22.42■■□□□ 1.18
CD55-209ENST00000488171 CYP2C9P11712 490 aa22.42■■□□□ 1.18
CD55-209ENST00000488171 HOXA13P31271 388 aaPredicted RBP22.42■■□□□ 1.18
CD55-209ENST00000488171 NFRKBQ6P4R8 1299 aa22.42■■□□□ 1.18
CD55-209ENST00000488171 SAMD3Q8N6K7 520 aa22.42■■□□□ 1.18
CD55-209ENST00000488171 PDCD2LQ9BRP1 358 aa22.42■■□□□ 1.18
CD55-209ENST00000488171 DDX41Q9UJV9 622 aaKnown RBP22.42■■□□□ 1.18
CD55-209ENST00000488171 TMEM265A0A087WTH1 108 aa22.41■■□□□ 1.18
CD55-209ENST00000488171 SLC27A2O14975 620 aa22.41■■□□□ 1.18
CD55-209ENST00000488171 MMP3P08254 477 aa22.41■■□□□ 1.18
CD55-209ENST00000488171 SUPT20HL2P0C7V6 817 aa22.41■■□□□ 1.18
CD55-209ENST00000488171 DNAJB2P25686 324 aa22.41■■□□□ 1.18
CD55-209ENST00000488171 FAM47CQ5HY64 1035 aa22.41■■□□□ 1.18
CD55-209ENST00000488171 HERVK_113Q902F9 699 aa22.41■■□□□ 1.18
CD55-209ENST00000488171 VWCEQ96DN2 955 aa22.41■■□□□ 1.18
CD55-209ENST00000488171 MAP3K14Q99558 947 aa22.41■■□□□ 1.18
CD55-209ENST00000488171 MTA3Q9BTC8 594 aa22.41■■□□□ 1.18
CD55-209ENST00000488171 BAZ2BQ9UIF8 2168 aaKnown RBP22.41■■□□□ 1.18
CD55-209ENST00000488171 GRXCR1A8MXD5 290 aa22.4■■□□□ 1.18
CD55-209ENST00000488171 PRC1O43663 620 aa22.4■■□□□ 1.18
CD55-209ENST00000488171 RGS20O76081 388 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms