RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 EFR3BQ9Y2G0 817 aa7.22□□□□□ -1.25
BRCA1-217ENST00000487825 YBX2Q9Y2T7 364 aaKnown RBP7.22□□□□□ -1.25
BRCA1-217ENST00000487825 NINLQ9Y2I6 1382 aa7.21□□□□□ -1.25
BRCA1-217ENST00000487825 DISP2A7MBM2 1401 aa7.21□□□□□ -1.25
BRCA1-217ENST00000487825 PTPRUQ92729 1446 aa7.21□□□□□ -1.25
BRCA1-217ENST00000487825 ERBINQ96RT1 1412 aa7.21□□□□□ -1.25
BRCA1-217ENST00000487825 NFIBO00712 420 aa7.21□□□□□ -1.26
BRCA1-217ENST00000487825 KRT1P04264 644 aa7.21□□□□□ -1.26
BRCA1-217ENST00000487825 TP53P04637 393 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-217ENST00000487825 PDE6BP35913 854 aa7.21□□□□□ -1.26
BRCA1-217ENST00000487825 CTSKP43235 329 aa7.21□□□□□ -1.26
BRCA1-217ENST00000487825 PMS1P54277 932 aaKnown RBP7.21□□□□□ -1.26
BRCA1-217ENST00000487825 HDLBPQ00341 1268 aaKnown RBP7.21□□□□□ -1.26
BRCA1-217ENST00000487825 R3HDM1Q15032 1099 aaKnown RBP7.21□□□□□ -1.26
BRCA1-217ENST00000487825 SNX17Q15036 470 aa7.21□□□□□ -1.26
BRCA1-217ENST00000487825 DCAF15Q66K64 600 aa7.21□□□□□ -1.26
BRCA1-217ENST00000487825 UNC5AQ6ZN44 842 aa7.21□□□□□ -1.26
BRCA1-217ENST00000487825 PPFIBP1Q86W92 1011 aa7.21□□□□□ -1.26
BRCA1-217ENST00000487825 NT5DC4Q86YG4 428 aa7.21□□□□□ -1.26
BRCA1-217ENST00000487825 C7orf61Q8IZ16 206 aa7.21□□□□□ -1.26
BRCA1-217ENST00000487825 KCNN1Q92952 543 aa7.21□□□□□ -1.26
BRCA1-217ENST00000487825 SHISA4Q96DD7 197 aa7.21□□□□□ -1.26
BRCA1-217ENST00000487825 INTS4Q96HW7 963 aaKnown RBP7.21□□□□□ -1.26
BRCA1-217ENST00000487825 HHIPL1Q96JK4 782 aa7.21□□□□□ -1.26
BRCA1-217ENST00000487825 SLIT2O94813 1529 aa7.21□□□□□ -1.26
BRCA1-217ENST00000487825 ADGRB2O60241 1585 aa7.2□□□□□ -1.26
BRCA1-217ENST00000487825 USP32Q8NFA0 1604 aa7.2□□□□□ -1.26
BRCA1-217ENST00000487825 ADGRL3Q9HAR2 1447 aa7.2□□□□□ -1.26
BRCA1-217ENST00000487825 RPRD2Q5VT52 1461 aaKnown RBP7.2□□□□□ -1.26
BRCA1-217ENST00000487825 TSPY4P0CV99 314 aa7.2□□□□□ -1.26
BRCA1-217ENST00000487825 TSPY10P0CW01 314 aa7.2□□□□□ -1.26
BRCA1-217ENST00000487825 GUCY2CP25092 1073 aa7.2□□□□□ -1.26
BRCA1-217ENST00000487825 AXDND1Q5T1B0 1012 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-217ENST00000487825 CRTC3Q6UUV7 619 aa7.2□□□□□ -1.26
BRCA1-217ENST00000487825 LSRQ86X29 649 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-217ENST00000487825 TAB3Q8N5C8 712 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-217ENST00000487825 CRBNQ96SW2 442 aa7.2□□□□□ -1.26
BRCA1-217ENST00000487825 DSCC1Q9BVC3 393 aa7.2□□□□□ -1.26
BRCA1-217ENST00000487825 CDADC1Q9BWV3 514 aa7.2□□□□□ -1.26
BRCA1-217ENST00000487825 KIAA1522Q9P206 1035 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-217ENST00000487825 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-217ENST00000487825 ARID1BQ8NFD5 2236 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-217ENST00000487825 UNCXA6NJT0 531 aa7.19□□□□□ -1.26
BRCA1-217ENST00000487825 ETV2O00321 342 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-217ENST00000487825 SHOXO15266 292 aa7.19□□□□□ -1.26
BRCA1-217ENST00000487825 KIR2DL1P43626 348 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-217ENST00000487825 KIR2DL2P43627 348 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-217ENST00000487825 RTP1P59025 263 aa7.19□□□□□ -1.26
BRCA1-217ENST00000487825 ATG14Q6ZNE5 492 aa7.19□□□□□ -1.26
BRCA1-217ENST00000487825 NLRX1Q86UT6 975 aa7.19□□□□□ -1.26
BRCA1-217ENST00000487825 IRF2BP1Q8IU81 584 aa7.19□□□□□ -1.26
BRCA1-217ENST00000487825 RBBP8NLQ8NC74 664 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-217ENST00000487825 ABCA3Q99758 1704 aa7.18□□□□□ -1.26
BRCA1-217ENST00000487825 C1orf167Q5SNV9 1468 aa7.18□□□□□ -1.26
BRCA1-217ENST00000487825 VAV1P15498 845 aa7.18□□□□□ -1.26
BRCA1-217ENST00000487825 NOL9Q5SY16 702 aaKnown RBP7.18□□□□□ -1.26
BRCA1-217ENST00000487825 ADGRF1Q5T601 910 aa7.18□□□□□ -1.26
BRCA1-217ENST00000487825 CILP2Q8IUL8 1156 aa7.18□□□□□ -1.26
BRCA1-217ENST00000487825 BRF1Q92994 677 aa7.18□□□□□ -1.26
BRCA1-217ENST00000487825 GPRASP2Q96D09 838 aa7.18□□□□□ -1.26
BRCA1-217ENST00000487825 AP5S1Q9NUS5 200 aa7.18□□□□□ -1.26
BRCA1-217ENST00000487825 SLC52A1Q9NWF4 448 aa7.18□□□□□ -1.26
BRCA1-217ENST00000487825 IQGAP3Q86VI3 1631 aa7.18□□□□□ -1.26
BRCA1-217ENST00000487825 NRAPQ86VF7 1730 aa7.18□□□□□ -1.26
BRCA1-217ENST00000487825 NPIPB6E9PJ23 425 aa7.17□□□□□ -1.26
BRCA1-217ENST00000487825 NRDCO43847 1150 aa7.17□□□□□ -1.26
BRCA1-217ENST00000487825 ZNF205O95201 554 aa7.17□□□□□ -1.26
BRCA1-217ENST00000487825 SDHBP21912 280 aa7.17□□□□□ -1.26
BRCA1-217ENST00000487825 CFPP27918 469 aa7.17□□□□□ -1.26
BRCA1-217ENST00000487825 BMP8BP34820 402 aa7.17□□□□□ -1.26
BRCA1-217ENST00000487825 COL9A2Q14055 689 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-217ENST00000487825 TMEM132EQ6IEE7 984 aa7.17□□□□□ -1.26
BRCA1-217ENST00000487825 FCRL2Q96LA5 508 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-217ENST00000487825 TOX2Q96NM4 488 aa7.17□□□□□ -1.26
BRCA1-217ENST00000487825 PLCD4Q9BRC7 762 aa7.17□□□□□ -1.26
BRCA1-217ENST00000487825 MCOLN1Q9GZU1 580 aa7.17□□□□□ -1.26
BRCA1-217ENST00000487825 GP6Q9HCN6 339 aa7.17□□□□□ -1.26
BRCA1-217ENST00000487825 GPR55Q9Y2T6 319 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-217ENST00000487825 LTBP3Q9NS15 1303 aa7.17□□□□□ -1.26
BRCA1-217ENST00000487825 PXDNQ92626 1479 aa7.17□□□□□ -1.26
BRCA1-217ENST00000487825 CASZ1Q86V15 1759 aa7.16□□□□□ -1.26
BRCA1-217ENST00000487825 MYOCOSA0A1B0GUC4 107 aa7.16□□□□□ -1.26
BRCA1-217ENST00000487825 OR14I1A6ND48 311 aa7.16□□□□□ -1.26
BRCA1-217ENST00000487825 TCAF2A6NFQ2 919 aa7.16□□□□□ -1.26
BRCA1-217ENST00000487825 FADS2P1A8MWK0 482 aa7.16□□□□□ -1.26
BRCA1-217ENST00000487825 GSNP06396 782 aa7.16□□□□□ -1.26
BRCA1-217ENST00000487825 SOX9P48436 509 aa7.16□□□□□ -1.26
BRCA1-217ENST00000487825 EIF6P56537 245 aaKnown RBP7.16□□□□□ -1.26
BRCA1-217ENST00000487825 ZNF445P59923 1031 aa7.16□□□□□ -1.26
BRCA1-217ENST00000487825 KIR3DS1Q14943 382 aa7.16□□□□□ -1.26
BRCA1-217ENST00000487825 KRT27Q7Z3Y8 459 aa7.16□□□□□ -1.26
BRCA1-217ENST00000487825 UNC5CLQ8IV45 518 aa7.16□□□□□ -1.26
BRCA1-217ENST00000487825 LRRC56Q8IYG6 542 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-217ENST00000487825 RGS22Q8NE09 1264 aa7.16□□□□□ -1.26
BRCA1-217ENST00000487825 SMARCC1Q92922 1105 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-217ENST00000487825 ZNF552Q9H707 407 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-217ENST00000487825 ERVK13-1Q9NX77 482 aa7.16□□□□□ -1.26
BRCA1-217ENST00000487825 PRR13Q9NZ81 148 aa7.16□□□□□ -1.26
BRCA1-217ENST00000487825 TNFRSF10DQ9UBN6 386 aa7.16□□□□□ -1.26
BRCA1-217ENST00000487825 ZNF214Q9UL59 606 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms