RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 VHLLQ6RSH7 139 aa6.4□□□□□ -1.38
UBR3-211ENST00000487689 RASGRP4Q8TDF6 673 aa6.4□□□□□ -1.38
UBR3-211ENST00000487689 TSPAN17Q96FV3 270 aa6.4□□□□□ -1.38
UBR3-211ENST00000487689 RCC1LQ96I51 464 aaKnown RBP6.4□□□□□ -1.38
UBR3-211ENST00000487689 APBA2Q99767 749 aa6.4□□□□□ -1.38
UBR3-211ENST00000487689 STRIP2Q9ULQ0 834 aa6.4□□□□□ -1.38
UBR3-211ENST00000487689 DUSP10Q9Y6W6 482 aa6.4□□□□□ -1.38
UBR3-211ENST00000487689 RECKO95980 971 aa6.39□□□□□ -1.39
UBR3-211ENST00000487689 PLA2G1BP04054 148 aaKnown RBP6.39□□□□□ -1.39
UBR3-211ENST00000487689 ITGB3P05106 788 aa6.39□□□□□ -1.39
UBR3-211ENST00000487689 ASGR2P07307 311 aa6.39□□□□□ -1.39
UBR3-211ENST00000487689 GLI4P10075 376 aa6.39□□□□□ -1.39
UBR3-211ENST00000487689 CNR2P34972 360 aa6.39□□□□□ -1.39
UBR3-211ENST00000487689 TTLL7Q6ZT98 887 aa6.39□□□□□ -1.39
UBR3-211ENST00000487689 B3GNT8Q7Z7M8 397 aa6.39□□□□□ -1.39
UBR3-211ENST00000487689 NT5DC4Q86YG4 428 aa6.39□□□□□ -1.39
UBR3-211ENST00000487689 CPNE8Q86YQ8 564 aa6.39□□□□□ -1.39
UBR3-211ENST00000487689 ARHGEF39Q8N4T4 335 aa6.39□□□□□ -1.39
UBR3-211ENST00000487689 DDX1Q92499 740 aaKnown RBP6.39□□□□□ -1.39
UBR3-211ENST00000487689 SEC16BQ96JE7 1060 aa6.39□□□□□ -1.39
UBR3-211ENST00000487689 SCAND2PQ9GZW5 306 aaPredicted RBP6.39□□□□□ -1.39
UBR3-211ENST00000487689 AP5M1Q9H0R1 490 aa6.39□□□□□ -1.39
UBR3-211ENST00000487689 CCSER2Q9H7U1 834 aa6.39□□□□□ -1.39
UBR3-211ENST00000487689 PCDH18Q9HCL0 1135 aa6.39□□□□□ -1.39
UBR3-211ENST00000487689 INPP5FQ9Y2H2 1132 aa6.39□□□□□ -1.39
UBR3-211ENST00000487689 HCFC2Q9Y5Z7 792 aa6.39□□□□□ -1.39
UBR3-211ENST00000487689 SMARCA5O60264 1052 aaPredicted RBP6.38□□□□□ -1.39
UBR3-211ENST00000487689 GJA9P57773 515 aa6.38□□□□□ -1.39
UBR3-211ENST00000487689 NCAPHQ15003 741 aa6.38□□□□□ -1.39
UBR3-211ENST00000487689 CPZQ66K79 652 aa6.38□□□□□ -1.39
UBR3-211ENST00000487689 WWC2Q6AWC2 1192 aa6.38□□□□□ -1.39
UBR3-211ENST00000487689 DCP2Q8IU60 420 aaKnown RBP6.38□□□□□ -1.39
UBR3-211ENST00000487689 FNIP1Q8TF40 1166 aa6.38□□□□□ -1.39
UBR3-211ENST00000487689 DDX11Q96FC9 970 aa6.38□□□□□ -1.39
UBR3-211ENST00000487689 MENTQ9BUN1 341 aa6.38□□□□□ -1.39
UBR3-211ENST00000487689 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.38□□□□□ -1.39
UBR3-211ENST00000487689 GULP1Q9UBP9 304 aa6.38□□□□□ -1.39
UBR3-211ENST00000487689 CUX2O14529 1486 aa6.38□□□□□ -1.39
UBR3-211ENST00000487689 KCNH1O95259 989 aa6.37□□□□□ -1.39
UBR3-211ENST00000487689 FUCA1P04066 466 aa6.37□□□□□ -1.39
UBR3-211ENST00000487689 PMLP29590 882 aa6.37□□□□□ -1.39
UBR3-211ENST00000487689 ZNF143P52747 638 aaPredicted RBP6.37□□□□□ -1.39
UBR3-211ENST00000487689 VPS37DQ86XT2 251 aa6.37□□□□□ -1.39
UBR3-211ENST00000487689 ANAPC16Q96DE5 110 aa6.37□□□□□ -1.39
UBR3-211ENST00000487689 KRTAP3-1Q9BYR8 98 aa6.37□□□□□ -1.39
UBR3-211ENST00000487689 RXFP1Q9HBX9 757 aa6.37□□□□□ -1.39
UBR3-211ENST00000487689 NTMQ9P121 344 aa6.37□□□□□ -1.39
UBR3-211ENST00000487689 C1QTNF3-AMACRE9PGA6 284 aa6.36□□□□□ -1.39
UBR3-211ENST00000487689 ATF2P15336 505 aa6.36□□□□□ -1.39
UBR3-211ENST00000487689 GJA8P48165 433 aa6.36□□□□□ -1.39
UBR3-211ENST00000487689 CASP7P55210 303 aa6.36□□□□□ -1.39
UBR3-211ENST00000487689 SAPCD2Q86UD0 394 aa6.36□□□□□ -1.39
UBR3-211ENST00000487689 ZC3H18Q86VM9 953 aaKnown RBP6.36□□□□□ -1.39
UBR3-211ENST00000487689 BVESQ8NE79 360 aa6.36□□□□□ -1.39
UBR3-211ENST00000487689 ZNF526Q8TF50 670 aaPredicted RBP6.36□□□□□ -1.39
UBR3-211ENST00000487689 CPA5Q8WXQ8 436 aa6.36□□□□□ -1.39
UBR3-211ENST00000487689 MRRFQ96E11 262 aaKnown RBP6.36□□□□□ -1.39
UBR3-211ENST00000487689 BTG4Q9NY30 223 aa6.36□□□□□ -1.39
UBR3-211ENST00000487689 CYP2C8P10632 490 aa6.35□□□□□ -1.39
UBR3-211ENST00000487689 ZNF20P17024 532 aa6.35□□□□□ -1.39
UBR3-211ENST00000487689 FBLN1P23142 703 aa6.35□□□□□ -1.39
UBR3-211ENST00000487689 CACNB2Q08289 660 aaPredicted RBP6.35□□□□□ -1.39
UBR3-211ENST00000487689 C9orf131Q5VYM1 1079 aa6.35□□□□□ -1.39
UBR3-211ENST00000487689 IQCEQ6IPM2 695 aa6.35□□□□□ -1.39
UBR3-211ENST00000487689 METTL16Q86W50 562 aaKnown RBP6.35□□□□□ -1.39
UBR3-211ENST00000487689 SMARCC2Q8TAQ2 1214 aa6.35□□□□□ -1.39
UBR3-211ENST00000487689 KLHL6Q8WZ60 621 aa6.35□□□□□ -1.39
UBR3-211ENST00000487689 RBM15Q96T37 977 aaKnown RBP eCLIP6.35□□□□□ -1.39
UBR3-211ENST00000487689 YIPF4Q9BSR8 244 aa6.35□□□□□ -1.39
UBR3-211ENST00000487689 MCMBPQ9BTE3 642 aa6.35□□□□□ -1.39
UBR3-211ENST00000487689 MRIQ9BWK5 157 aa6.35□□□□□ -1.39
UBR3-211ENST00000487689 MARCH2Q9P0N8 246 aa6.35□□□□□ -1.39
UBR3-211ENST00000487689 CLEC1BQ9P126 229 aa6.35□□□□□ -1.39
UBR3-211ENST00000487689 LRP2BPQ9P2M1 347 aa6.35□□□□□ -1.39
UBR3-211ENST00000487689 SH3D21A4FU49 640 aa6.34□□□□□ -1.39
UBR3-211ENST00000487689 MYO1BO43795 1136 aa6.34□□□□□ -1.39
UBR3-211ENST00000487689 NOBOXO60393 691 aa6.34□□□□□ -1.39
UBR3-211ENST00000487689 NTRK1P04629 796 aa6.34□□□□□ -1.39
UBR3-211ENST00000487689 C6P13671 934 aa6.34□□□□□ -1.39
UBR3-211ENST00000487689 MC3RP41968 323 aa6.34□□□□□ -1.39
UBR3-211ENST00000487689 SARSP49591 514 aaKnown RBP6.34□□□□□ -1.39
UBR3-211ENST00000487689 HDLBPQ00341 1268 aaKnown RBP6.34□□□□□ -1.39
UBR3-211ENST00000487689 SCRN1Q12765 414 aa6.34□□□□□ -1.39
UBR3-211ENST00000487689 FAM124AQ86V42 546 aa6.34□□□□□ -1.39
UBR3-211ENST00000487689 ZBTB8AQ96BR9 441 aa6.34□□□□□ -1.39
UBR3-211ENST00000487689 SHDQ96IW2 340 aa6.34□□□□□ -1.39
UBR3-211ENST00000487689 C8orf49Q96NF6 230 aa6.34□□□□□ -1.39
UBR3-211ENST00000487689 LNPKQ9C0E8 428 aa6.34□□□□□ -1.39
UBR3-211ENST00000487689 TGIF2Q9GZN2 237 aa6.34□□□□□ -1.39
UBR3-211ENST00000487689 BCAS3Q9H6U6 928 aa6.34□□□□□ -1.39
UBR3-211ENST00000487689 CAPN10Q9HC96 672 aa6.34□□□□□ -1.39
UBR3-211ENST00000487689 C7orf72A4D263 438 aa6.33□□□□□ -1.4
UBR3-211ENST00000487689 SLPIP03973 132 aa6.33□□□□□ -1.4
UBR3-211ENST00000487689 PLS3P13797 630 aa6.33□□□□□ -1.4
UBR3-211ENST00000487689 GDF5P43026 501 aa6.33□□□□□ -1.4
UBR3-211ENST00000487689 HTRA3P83110 453 aa6.33□□□□□ -1.4
UBR3-211ENST00000487689 TNNI3KQ59H18 835 aa6.33□□□□□ -1.4
UBR3-211ENST00000487689 ETV3LQ6ZN32 361 aa6.33□□□□□ -1.4
UBR3-211ENST00000487689 CARFQ8N187 725 aa6.33□□□□□ -1.4
UBR3-211ENST00000487689 LOXL4Q96JB6 756 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms