RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 MYL1P05976 194 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 ALAS1P13196 640 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 HOXA13P31271 388 aaPredicted RBP6.95□□□□□ -1.3
VAMP3-203ENST00000487194 ZNF76P36508 570 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 STAT6P42226 847 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 TECP42680 631 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 TXKP42681 527 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 HSD17B4P51659 736 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 NLRP12P59046 1061 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 MDM2Q00987 491 aaPredicted RBP6.95□□□□□ -1.3
VAMP3-203ENST00000487194 SEMA3FQ13275 785 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 PABPC4Q13310 644 aaKnown RBP eCLIP6.95□□□□□ -1.3
VAMP3-203ENST00000487194 POSTNQ15063 836 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 ANO6Q4KMQ2 910 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 KRT79Q5XKE5 535 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 USP49Q70CQ1 688 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 CABP7Q86V35 215 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 FCHSD1Q86WN1 690 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 CPXCR1Q8N123 301 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 PDILTQ8N807 584 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 MB21D1Q8N884 522 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 TRIML1Q8N9V2 468 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 RNF214Q8ND24 703 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 SMARCE1Q969G3 411 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 DHX58Q96C10 678 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 ATG4CQ96DT6 458 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 CALML4Q96GE6 196 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 AGBL1Q96MI9 1066 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 FAM20AQ96MK3 541 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 TRERF1Q96PN7 1200 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 PANK2Q9BZ23 570 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 ELP3Q9H9T3 547 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 RAVER2Q9HCJ3 691 aaKnown RBP6.95□□□□□ -1.3
VAMP3-203ENST00000487194 KCNMB3Q9NPA1 279 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 DISC1Q9NRI5 854 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 DACH1Q9UI36 760 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 PCDHA12Q9UN75 941 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 KCNH4Q9UQ05 1017 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 A0A0G2JLL6 359 aaPredicted RBP6.94□□□□□ -1.3
VAMP3-203ENST00000487194 GTPBP6O43824 516 aaPredicted RBP6.94□□□□□ -1.3
VAMP3-203ENST00000487194 EDIL3O43854 480 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 HOXA7P31268 230 aaPredicted RBP6.94□□□□□ -1.3
VAMP3-203ENST00000487194 ZNF165P49910 485 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 SETQ01105 290 aaPredicted RBP6.94□□□□□ -1.3
VAMP3-203ENST00000487194 AMPD3Q01432 767 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 CCDC173Q0VFZ6 552 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 PNOCQ13519 176 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 DGKZQ13574 1117 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 KARSQ15046 597 aaKnown RBP6.94□□□□□ -1.3
VAMP3-203ENST00000487194 E2F4Q16254 413 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 PRR16Q569H4 304 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 CT47A1Q5JQC4 288 aaPredicted RBP6.94□□□□□ -1.3
VAMP3-203ENST00000487194 LDLRAD1Q5T700 205 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 NT5DC1Q5TFE4 455 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 RRAGBQ5VZM2 374 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 PDXDC2PQ6P474 469 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 DLK2Q6UY11 383 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 FASTKD5Q7L8L6 764 aaKnown RBP6.94□□□□□ -1.3
VAMP3-203ENST00000487194 SH3RF1Q7Z6J0 888 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 PRRT2Q7Z6L0 340 aaPredicted RBP6.94□□□□□ -1.3
VAMP3-203ENST00000487194 REPS2Q8NFH8 660 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 ERMNQ8TAM6 284 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 CLEC4DQ8WXI8 215 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 HAS1Q92839 578 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 SLC10A4Q96EP9 437 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 OTUD5Q96G74 571 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 PAGE5Q96GU1 130 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 CDK5RAP3Q96JB5 506 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 GSDMAQ96QA5 445 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 P2RX7Q99572 595 aaKnown RBP6.94□□□□□ -1.3
VAMP3-203ENST00000487194 BPIFA3Q9BQP9 254 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 TEX13BQ9BXU2 312 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 GTPBP4Q9BZE4 634 aaKnown RBP6.94□□□□□ -1.3
VAMP3-203ENST00000487194 LRRC27Q9C0I9 530 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 DNAJC25Q9H1X3 360 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 TTC12Q9H892 705 aaPredicted RBP6.94□□□□□ -1.3
VAMP3-203ENST00000487194 PCDHA5Q9Y5H7 936 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 PAPPA2Q9BXP8 1791 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 KDM3AQ9Y4C1 1321 aa6.94□□□□□ -1.3
VAMP3-203ENST00000487194 MYH7BA7E2Y1 1941 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 A0A087X0B3 334 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 SPDYE16A6NNV3 312 aaPredicted RBP6.93□□□□□ -1.3
VAMP3-203ENST00000487194 SMTNL1A8MU46 457 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 BECN2A8MW95 431 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 GOLGA6L19H0YKK7 550 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 NFIBO00712 420 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 IRF6O14896 467 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 TAL1P17542 331 aaPredicted RBP6.93□□□□□ -1.3
VAMP3-203ENST00000487194 OSBPP22059 807 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 COPB2P35606 906 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 STAT3P40763 770 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 SARSP49591 514 aaKnown RBP6.93□□□□□ -1.3
VAMP3-203ENST00000487194 TPM4P67936 248 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 IRX3P78415 501 aaPredicted RBP6.93□□□□□ -1.3
VAMP3-203ENST00000487194 SNAPC2Q13487 334 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 TMEM132BQ14DG7 1078 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 CEP55Q53EZ4 464 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 HAUS3Q68CZ6 603 aa6.93□□□□□ -1.3
VAMP3-203ENST00000487194 SNRNP48Q6IEG0 339 aaKnown RBP6.93□□□□□ -1.3
VAMP3-203ENST00000487194 XRRA1Q6P2D8 792 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms