RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 LSAMPQ13449 338 aa6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 SEPT7Q16181 437 aaKnown RBP6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 PIK3R6Q5UE93 754 aa6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 INTS5Q6P9B9 1019 aaKnown RBP6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 SPRED2Q7Z698 418 aa6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 STK11IPQ8N1F8 1099 aa6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 AFAP1L2Q8N4X5 818 aa6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 PRPF38AQ8NAV1 312 aaKnown RBP6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 DPF3Q92784 378 aa6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 WNK4Q96J92 1243 aa6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 CHAMP1Q96JM3 812 aa6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 G6PC3Q9BUM1 346 aa6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 ADAMTS10Q9H324 1103 aa6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 LMCD1Q9NZU5 365 aa6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 SAMD15Q9P1V8 674 aa6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 PPARGC1AQ9UBK2 798 aaKnown RBP6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 FBXL7Q9UJT9 491 aa6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 SLC5A6Q9Y289 635 aa6.92□□□□□ -1.3
PRPF38A-203ENST00000487160 FADS2P1A8MWK0 482 aa6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 NPHS1O60500 1241 aa6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 MED26O95402 600 aa6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 NPTXRO95502 500 aa6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 SOD2P04179 222 aa6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 CKMP06732 381 aa6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 ZP2Q05996 745 aa6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 STRN3Q13033 797 aa6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 PAK1Q13153 545 aa6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 KIZQ2M2Z5 673 aa6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 RALGPS1Q5JS13 557 aa6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 ZNF574Q6ZN55 896 aaPredicted RBP6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 DDX53Q86TM3 631 aaKnown RBP6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 IGSF22Q8N9C0 903 aa6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 STAG1Q8WVM7 1258 aa6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 LINC01599Q8WXQ3 324 aa6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 MAP6Q96JE9 813 aa6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 HHIPL1Q96JK4 782 aa6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 IPPKQ9H8X2 491 aa6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 BTG4Q9NY30 223 aa6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 DDX56Q9NY93 547 aaKnown RBP6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 TNFRSF10DQ9UBN6 386 aa6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 COQ6Q9Y2Z9 468 aa6.91□□□□□ -1.3
PRPF38A-203ENST00000487160 PPP1R11O60927 126 aaPredicted RBP6.9□□□□□ -1.3
PRPF38A-203ENST00000487160 GLRX3O76003 335 aaKnown RBP6.9□□□□□ -1.3
PRPF38A-203ENST00000487160 ZGLP1P0C6A0 271 aa6.9□□□□□ -1.3
PRPF38A-203ENST00000487160 RPL11P62913 178 aaKnown RBP6.9□□□□□ -1.3
PRPF38A-203ENST00000487160 ANGEL2Q5VTE6 544 aaKnown RBP6.9□□□□□ -1.3
PRPF38A-203ENST00000487160 WFDC3Q8IUB2 231 aa6.9□□□□□ -1.3
PRPF38A-203ENST00000487160 ATL2Q8NHH9 583 aa6.9□□□□□ -1.3
PRPF38A-203ENST00000487160 JMJD8Q96S16 334 aa6.9□□□□□ -1.3
PRPF38A-203ENST00000487160 SLAMF8Q9P0V8 285 aa6.9□□□□□ -1.3
PRPF38A-203ENST00000487160 GULP1Q9UBP9 304 aa6.9□□□□□ -1.3
PRPF38A-203ENST00000487160 MCM8Q9UJA3 840 aa6.9□□□□□ -1.3
PRPF38A-203ENST00000487160 EYA4O95677 639 aa6.89□□□□□ -1.31
PRPF38A-203ENST00000487160 PYGMP11217 842 aa6.89□□□□□ -1.31
PRPF38A-203ENST00000487160 GRK2P25098 689 aa6.89□□□□□ -1.31
PRPF38A-203ENST00000487160 GRK3P35626 688 aa6.89□□□□□ -1.31
PRPF38A-203ENST00000487160 GTF2A2P52657 109 aa6.89□□□□□ -1.31
PRPF38A-203ENST00000487160 DUSP4Q13115 394 aa6.89□□□□□ -1.31
PRPF38A-203ENST00000487160 SKOR2Q2VWA4 1001 aaPredicted RBP6.89□□□□□ -1.31
PRPF38A-203ENST00000487160 CEP68Q76N32 757 aa6.89□□□□□ -1.31
PRPF38A-203ENST00000487160 SLCO6A1Q86UG4 719 aa6.89□□□□□ -1.31
PRPF38A-203ENST00000487160 ALPK1Q96QP1 1244 aa6.89□□□□□ -1.31
PRPF38A-203ENST00000487160 KCNJ15Q99712 375 aa6.89□□□□□ -1.31
PRPF38A-203ENST00000487160 CDIP1Q9H305 208 aa6.89□□□□□ -1.31
PRPF38A-203ENST00000487160 CLDND1Q9NY35 253 aa6.89□□□□□ -1.31
PRPF38A-203ENST00000487160 RB1CC1Q8TDY2 1594 aa6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 A0A1W2PQ45 241 aaPredicted RBP6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 A0A1W2PQY0 241 aa6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 FAM47E-STBD1D6RA91 191 aa6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 M0R2C6 588 aa6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 USP2O75604 605 aaPredicted RBP6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 KIR2DL1P43626 348 aaPredicted RBP6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 KIR2DL2P43627 348 aaPredicted RBP6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 DNM2P50570 870 aa6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 RTP1P59025 263 aa6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 FAM50AQ14320 339 aaKnown RBP6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 DHCR24Q15392 516 aa6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 FAM47CQ5HY64 1035 aa6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 WWC2Q6AWC2 1192 aa6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 CEP128Q6ZU80 1094 aa6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 NLRP10Q86W26 655 aa6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 NXPE1Q8N323 547 aa6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 FBXW5Q969U6 566 aa6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 JAM3Q9BX67 310 aa6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 CELF4Q9BZC1 486 aaKnown RBP6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 PRDM7Q9NQW5 492 aa6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 HOMER2Q9NSB8 354 aa6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 CCDC39Q9UFE4 941 aa6.88□□□□□ -1.31
PRPF38A-203ENST00000487160 WTIPA6NIX2 430 aaPredicted RBP6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 CBX4O00257 560 aa6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 TRAF5O00463 557 aa6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 WNT9AO14904 365 aa6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 PRNPP04156 253 aa6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 CPEP16870 476 aa6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 FPR2P25090 351 aa6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 ITGB7P26010 798 aa6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 SSTR4P31391 388 aa6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 SCNN1BP51168 640 aa6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 ST5P78524 1137 aa6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 LHFPL2Q6ZUX7 228 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms