RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 KRT83P78385 493 aa13.76□□□□□ -0.21
PTCD2-204ENST00000486995 ZNF543Q08ER8 600 aa13.76□□□□□ -0.21
PTCD2-204ENST00000486995 SMC1AQ14683 1233 aaKnown RBP13.76□□□□□ -0.21
PTCD2-204ENST00000486995 BEND6Q5SZJ8 279 aaPredicted RBP13.76□□□□□ -0.21
PTCD2-204ENST00000486995 TRAPPC11Q7Z392 1133 aa13.76□□□□□ -0.21
PTCD2-204ENST00000486995 ADGRF4Q8IZF3 695 aa13.76□□□□□ -0.21
PTCD2-204ENST00000486995 COA1Q9GZY4 146 aa13.76□□□□□ -0.21
PTCD2-204ENST00000486995 NHEJ1Q9H9Q4 299 aaPredicted RBP13.76□□□□□ -0.21
PTCD2-204ENST00000486995 UBR3Q6ZT12 1888 aa13.75□□□□□ -0.21
PTCD2-204ENST00000486995 PNMA6FA0A0J9YX94 578 aa13.75□□□□□ -0.21
PTCD2-204ENST00000486995 TMEM266Q2M3C6 531 aa13.75□□□□□ -0.21
PTCD2-204ENST00000486995 FIGNQ5HY92 759 aa13.75□□□□□ -0.21
PTCD2-204ENST00000486995 CCDC122Q5T0U0 273 aa13.75□□□□□ -0.21
PTCD2-204ENST00000486995 NCAPH2Q6IBW4 605 aa13.75□□□□□ -0.21
PTCD2-204ENST00000486995 TTBK2Q6IQ55 1244 aa13.75□□□□□ -0.21
PTCD2-204ENST00000486995 DYMQ7RTS9 669 aa13.75□□□□□ -0.21
PTCD2-204ENST00000486995 RIC8AQ9NPQ8 531 aa13.75□□□□□ -0.21
PTCD2-204ENST00000486995 SERPINB13Q9UIV8 391 aa13.75□□□□□ -0.21
PTCD2-204ENST00000486995 SUGT1Q9Y2Z0 365 aa13.75□□□□□ -0.21
PTCD2-204ENST00000486995 FOCADQ5VW36 1801 aa13.75□□□□□ -0.21
PTCD2-204ENST00000486995 SPATA31A6Q5VVP1 1343 aa13.75□□□□□ -0.21
PTCD2-204ENST00000486995 A0A1W2PQJ5 194 aa13.75□□□□□ -0.21
PTCD2-204ENST00000486995 RCCD1A6NED2 376 aa13.75□□□□□ -0.21
PTCD2-204ENST00000486995 CLK2P49760 499 aaKnown RBP13.75□□□□□ -0.21
PTCD2-204ENST00000486995 PPP4R3AQ6IN85 833 aa13.75□□□□□ -0.21
PTCD2-204ENST00000486995 SEPT12Q8IYM1 358 aa13.75□□□□□ -0.21
PTCD2-204ENST00000486995 CCDC170Q8IYT3 715 aa13.75□□□□□ -0.21
PTCD2-204ENST00000486995 RAD54LQ92698 747 aa13.75□□□□□ -0.21
PTCD2-204ENST00000486995 LACRTQ9GZZ8 138 aa13.75□□□□□ -0.21
PTCD2-204ENST00000486995 ZCCHC17Q9NP64 241 aaKnown RBP13.75□□□□□ -0.21
PTCD2-204ENST00000486995 ZNHIT6Q9NWK9 470 aaKnown RBP13.75□□□□□ -0.21
PTCD2-204ENST00000486995 LTBP1Q14766 1721 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 EIF3CLB5ME19 914 aaKnown RBP13.74□□□□□ -0.21
PTCD2-204ENST00000486995 ENC1O14682 589 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 PPEF1O14829 653 aaPredicted RBP13.74□□□□□ -0.21
PTCD2-204ENST00000486995 POLR3GO15318 223 aaPredicted RBP13.74□□□□□ -0.21
PTCD2-204ENST00000486995 RHOXF2BP0C7M4 288 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 SHMT1P34896 483 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 CYLC1P35663 651 aaPredicted RBP13.74□□□□□ -0.21
PTCD2-204ENST00000486995 CDK17Q00537 523 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 UBE2SQ16763 222 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 KCNK18Q7Z418 384 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 NOA1Q8NC60 698 aaKnown RBP13.74□□□□□ -0.21
PTCD2-204ENST00000486995 CDK5RAP3Q96JB5 506 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 PCMTD1Q96MG8 357 aaPredicted RBP13.74□□□□□ -0.21
PTCD2-204ENST00000486995 EIF3CQ99613 913 aaKnown RBP13.74□□□□□ -0.21
PTCD2-204ENST00000486995 RHOXF2Q9BQY4 288 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 MXD3Q9BW11 206 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 USP40Q9NVE5 1235 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 HDAC6Q9UBN7 1215 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 OAS2P29728 719 aaKnown RBP13.74□□□□□ -0.21
PTCD2-204ENST00000486995 TNNI2P48788 182 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 EHHADHQ08426 723 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 ECM1Q16610 540 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 TMEM119Q4V9L6 283 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 FKBP15Q5T1M5 1219 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 PPP1R18Q6NYC8 613 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 TMC4Q7Z404 712 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 GUF1Q8N442 669 aaKnown RBP13.74□□□□□ -0.21
PTCD2-204ENST00000486995 SNX29Q8TEQ0 813 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 HAS1Q92839 578 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 RAB34Q9BZG1 259 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 SWAP70Q9UH65 585 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 ATP6V0A2Q9Y487 856 aa13.74□□□□□ -0.21
PTCD2-204ENST00000486995 ATP1A1P05023 1023 aaKnown RBP13.73□□□□□ -0.21
PTCD2-204ENST00000486995 VWA3BQ502W6 1294 aa13.73□□□□□ -0.21
PTCD2-204ENST00000486995 PAPD7Q5XG87 772 aaKnown RBP13.73□□□□□ -0.21
PTCD2-204ENST00000486995 KRT79Q5XKE5 535 aa13.73□□□□□ -0.21
PTCD2-204ENST00000486995 KIAA1328Q86T90 577 aa13.73□□□□□ -0.21
PTCD2-204ENST00000486995 DDX12PQ92771 950 aa13.73□□□□□ -0.21
PTCD2-204ENST00000486995 JAKMIP2Q96AA8 810 aa13.73□□□□□ -0.21
PTCD2-204ENST00000486995 ABCB6Q9NP58 842 aa13.73□□□□□ -0.21
PTCD2-204ENST00000486995 SIK3Q9Y2K2 1263 aa13.73□□□□□ -0.21
PTCD2-204ENST00000486995 KRT86O43790 486 aa13.73□□□□□ -0.21
PTCD2-204ENST00000486995 SLC16A2P36021 539 aa13.73□□□□□ -0.21
PTCD2-204ENST00000486995 VSNL1P62760 191 aa13.73□□□□□ -0.21
PTCD2-204ENST00000486995 NDST4Q9H3R1 872 aa13.73□□□□□ -0.21
PTCD2-204ENST00000486995 L1RE1Q9UN81 338 aa13.73□□□□□ -0.21
PTCD2-204ENST00000486995 MYO3BQ8WXR4 1341 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 EPHB6O15197 1021 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 HNRNPH3P31942 346 aaKnown RBP13.72□□□□□ -0.21
PTCD2-204ENST00000486995 CYP2C19P33261 490 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 SCNN1DP51172 638 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 CYP27A1Q02318 531 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 SLC27A3Q5K4L6 730 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 CDC42EP5Q6NZY7 148 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 GLIS3Q8NEA6 775 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 GJA10Q969M2 543 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 MTMR8Q96EF0 704 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 DDX25Q9UHL0 483 aaKnown RBP13.72□□□□□ -0.21
PTCD2-204ENST00000486995 PLAGL2Q9UPG8 496 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 SAR1BQ9Y6B6 198 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 DUSP10Q9Y6W6 482 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 EP400Q96L91 3159 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 LRRC37AA6NMS7 1700 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 USP17L10C9JJH3 530 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 ZNF263O14978 683 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 ZBTB5O15062 677 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 SRGAP2O75044 1071 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 SLURP2P0DP57 97 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms