RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 GNEQ9Y223 722 aaKnown RBP15.19■□□□□ 0.02
SF1-216ENST00000486867 DDX49Q9Y6V7 483 aaKnown RBP15.19■□□□□ 0.02
SF1-216ENST00000486867 V9GY48 417 aaPredicted RBP15.19■□□□□ 0.02
SF1-216ENST00000486867 LRRC41Q15345 812 aa15.18■□□□□ 0.02
SF1-216ENST00000486867 PKN1Q16512 942 aa15.18■□□□□ 0.02
SF1-216ENST00000486867 PFKFB3Q16875 520 aaPredicted RBP15.18■□□□□ 0.02
SF1-216ENST00000486867 WWC2Q6AWC2 1192 aa15.18■□□□□ 0.02
SF1-216ENST00000486867 IQSEC1Q6DN90 963 aa15.18■□□□□ 0.02
SF1-216ENST00000486867 TYW1BQ6NUM6 668 aa15.18■□□□□ 0.02
SF1-216ENST00000486867 ARRDC4Q8NCT1 418 aa15.18■□□□□ 0.02
SF1-216ENST00000486867 KLHDC9Q8NEP7 349 aa15.18■□□□□ 0.02
SF1-216ENST00000486867 IL27Q8NEV9 243 aa15.18■□□□□ 0.02
SF1-216ENST00000486867 DIS3LQ8TF46 1054 aaKnown RBP15.18■□□□□ 0.02
SF1-216ENST00000486867 PIBF1Q8WXW3 757 aa15.18■□□□□ 0.02
SF1-216ENST00000486867 PDCD2LQ9BRP1 358 aa15.18■□□□□ 0.02
SF1-216ENST00000486867 BARHL2Q9NY43 387 aa15.18■□□□□ 0.02
SF1-216ENST00000486867 ZHX1Q9UKY1 873 aaPredicted RBP15.18■□□□□ 0.02
SF1-216ENST00000486867 TPCN1Q9ULQ1 816 aa15.18■□□□□ 0.02
SF1-216ENST00000486867 Q9Y3F1 56 aa15.18■□□□□ 0.02
SF1-216ENST00000486867 SYNRGQ9UMZ2 1314 aa15.17■□□□□ 0.02
SF1-216ENST00000486867 hCG_1642624A0A1W2PR95 340 aa15.17■□□□□ 0.02
SF1-216ENST00000486867 ESYT2A0FGR8 921 aa15.17■□□□□ 0.02
SF1-216ENST00000486867 STXBP3O00186 592 aa15.17■□□□□ 0.02
SF1-216ENST00000486867 CTAGE5O15320 804 aa15.17■□□□□ 0.02
SF1-216ENST00000486867 PFKFB2O60825 505 aa15.17■□□□□ 0.02
SF1-216ENST00000486867 SCG2P13521 617 aa15.17■□□□□ 0.02
SF1-216ENST00000486867 HOXA13P31271 388 aaPredicted RBP15.17■□□□□ 0.02
SF1-216ENST00000486867 AK2P54819 239 aa15.17■□□□□ 0.02
SF1-216ENST00000486867 GJA9P57773 515 aa15.17■□□□□ 0.02
SF1-216ENST00000486867 PDE4DQ08499 809 aa15.17■□□□□ 0.02
SF1-216ENST00000486867 CCSAPQ6IQ19 270 aaPredicted RBP15.17■□□□□ 0.02
SF1-216ENST00000486867 NECAB2Q7Z6G3 386 aa15.17■□□□□ 0.02
SF1-216ENST00000486867 FBXO16Q8IX29 292 aaPredicted RBP15.17■□□□□ 0.02
SF1-216ENST00000486867 PAWRQ96IZ0 340 aaKnown RBP15.17■□□□□ 0.02
SF1-216ENST00000486867 NCOA5Q9HCD5 579 aaKnown RBP15.17■□□□□ 0.02
SF1-216ENST00000486867 XPNPEP3Q9NQH7 507 aa15.17■□□□□ 0.02
SF1-216ENST00000486867 PDGFCQ9NRA1 345 aa15.17■□□□□ 0.02
SF1-216ENST00000486867 WDR81Q562E7 1941 aa15.17■□□□□ 0.02
SF1-216ENST00000486867 NR3C2P08235 984 aa15.16■□□□□ 0.02
SF1-216ENST00000486867 ADCYAP1R1P41586 468 aa15.16■□□□□ 0.02
SF1-216ENST00000486867 NEK4P51957 841 aa15.16■□□□□ 0.02
SF1-216ENST00000486867 TNFAIP2Q03169 654 aa15.16■□□□□ 0.02
SF1-216ENST00000486867 STXBP2Q15833 593 aa15.16■□□□□ 0.02
SF1-216ENST00000486867 DUSP28Q4G0W2 176 aa15.16■□□□□ 0.02
SF1-216ENST00000486867 ANO1Q5XXA6 986 aa15.16■□□□□ 0.02
SF1-216ENST00000486867 CCDC62Q6P9F0 684 aa15.16■□□□□ 0.02
SF1-216ENST00000486867 VSIG10LQ86VR7 867 aa15.16■□□□□ 0.02
SF1-216ENST00000486867 FAM177A1Q8N128 213 aaPredicted RBP15.16■□□□□ 0.02
SF1-216ENST00000486867 GPKOWQ92917 476 aaPredicted RBP eCLIP15.16■□□□□ 0.02
SF1-216ENST00000486867 LENG1Q96BZ8 264 aaPredicted RBP15.16■□□□□ 0.02
SF1-216ENST00000486867 TSEN34Q9BSV6 310 aaKnown RBP15.16■□□□□ 0.02
SF1-216ENST00000486867 C22orf23Q9BZE7 217 aa15.16■□□□□ 0.02
SF1-216ENST00000486867 PSTPIP2Q9H939 334 aa15.16■□□□□ 0.02
SF1-216ENST00000486867 RIC8AQ9NPQ8 531 aa15.16■□□□□ 0.02
SF1-216ENST00000486867 NAP1L2Q9ULW6 460 aaPredicted RBP15.16■□□□□ 0.02
SF1-216ENST00000486867 PHF24Q9UPV7 400 aa15.16■□□□□ 0.02
SF1-216ENST00000486867 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.15■□□□□ 0.02
SF1-216ENST00000486867 EIF3JO75822 258 aaKnown RBP15.15■□□□□ 0.02
SF1-216ENST00000486867 SMPD1P17405 629 aa15.15■□□□□ 0.02
SF1-216ENST00000486867 CCT2P78371 535 aaKnown RBP15.15■□□□□ 0.02
SF1-216ENST00000486867 PGM5Q15124 567 aa15.15■□□□□ 0.02
SF1-216ENST00000486867 ARHGEF16Q5VV41 709 aa15.15■□□□□ 0.02
SF1-216ENST00000486867 USP17L6PQ6QN14 398 aa15.15■□□□□ 0.02
SF1-216ENST00000486867 HEATR3Q7Z4Q2 680 aa15.15■□□□□ 0.02
SF1-216ENST00000486867 IL31RAQ8NI17 732 aa15.15■□□□□ 0.02
SF1-216ENST00000486867 SCFD2Q8WU76 684 aa15.15■□□□□ 0.02
SF1-216ENST00000486867 GLT8D2Q9H1C3 349 aa15.15■□□□□ 0.02
SF1-216ENST00000486867 C11orf49Q9H6J7 331 aa15.15■□□□□ 0.02
SF1-216ENST00000486867 NKRFO15226 690 aaKnown RBP eCLIP15.14■□□□□ 0.012e-8■■□□□ 12.1
SF1-216ENST00000486867 STAM2O75886 525 aa15.14■□□□□ 0.01
SF1-216ENST00000486867 RGS20O76081 388 aa15.14■□□□□ 0.01
SF1-216ENST00000486867 PGK1P00558 417 aa15.14■□□□□ 0.01
SF1-216ENST00000486867 EIF2AK2P19525 551 aaKnown RBP15.14■□□□□ 0.01
SF1-216ENST00000486867 CLK2P49760 499 aaKnown RBP15.14■□□□□ 0.01
SF1-216ENST00000486867 SCRN1Q12765 414 aa15.14■□□□□ 0.01
SF1-216ENST00000486867 SNX17Q15036 470 aa15.14■□□□□ 0.01
SF1-216ENST00000486867 XRRA1Q6P2D8 792 aa15.14■□□□□ 0.01
SF1-216ENST00000486867 EEPD1Q7L9B9 569 aa15.14■□□□□ 0.01
SF1-216ENST00000486867 RNF180Q86T96 592 aa15.14■□□□□ 0.01
SF1-216ENST00000486867 CUL5Q93034 780 aa15.14■□□□□ 0.01
SF1-216ENST00000486867 PHKBQ93100 1093 aa15.14■□□□□ 0.01
SF1-216ENST00000486867 TBC1D32Q96NH3 1257 aa15.14■□□□□ 0.01
SF1-216ENST00000486867 LARP6Q9BRS8 491 aaKnown RBP15.14■□□□□ 0.01
SF1-216ENST00000486867 ZMYND12Q9H0C1 365 aa15.14■□□□□ 0.01
SF1-216ENST00000486867 SH3GLB2Q9NR46 395 aa15.14■□□□□ 0.01
SF1-216ENST00000486867 STK36Q9NRP7 1315 aa15.14■□□□□ 0.01
SF1-216ENST00000486867 LTBP2Q14767 1821 aa15.13■□□□□ 0.01
SF1-216ENST00000486867 KBTBD13C9JR72 458 aa15.13■□□□□ 0.01
SF1-216ENST00000486867 NAPAP54920 295 aa15.13■□□□□ 0.01
SF1-216ENST00000486867 MRPS9P82933 396 aaKnown RBP15.13■□□□□ 0.01
SF1-216ENST00000486867 ME3Q16798 604 aa15.13■□□□□ 0.01
SF1-216ENST00000486867 TMEM63BQ5T3F8 832 aa15.13■□□□□ 0.01
SF1-216ENST00000486867 GJC2Q5T442 439 aaPredicted RBP15.13■□□□□ 0.01
SF1-216ENST00000486867 C1orf53Q5VUE5 145 aa15.13■□□□□ 0.01
SF1-216ENST00000486867 PCNX4Q63HM2 1172 aa15.13■□□□□ 0.01
SF1-216ENST00000486867 TLK2Q86UE8 772 aa15.13■□□□□ 0.01
SF1-216ENST00000486867 FCHSD1Q86WN1 690 aa15.13■□□□□ 0.01
SF1-216ENST00000486867 SMARCC2Q8TAQ2 1214 aa15.13■□□□□ 0.01
SF1-216ENST00000486867 INPP4AQ96PE3 977 aaPredicted RBP15.13■□□□□ 0.01
SF1-216ENST00000486867 HTATIP2Q9BUP3 242 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms