RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 SYDE1Q6ZW31 735 aaPredicted RBP6.97□□□□□ -1.29
COPS3-209ENST00000486810 OSBP2Q969R2 916 aa6.97□□□□□ -1.29
COPS3-209ENST00000486810 ZNF669Q96BR6 464 aaPredicted RBP6.97□□□□□ -1.29
COPS3-209ENST00000486810 CCDC140Q96MF4 163 aa6.97□□□□□ -1.29
COPS3-209ENST00000486810 GCM1Q9NP62 436 aa6.97□□□□□ -1.29
COPS3-209ENST00000486810 PFDN2Q9UHV9 154 aa6.97□□□□□ -1.29
COPS3-209ENST00000486810 FBXL7Q9UJT9 491 aa6.97□□□□□ -1.29
COPS3-209ENST00000486810 HCFC2Q9Y5Z7 792 aa6.97□□□□□ -1.29
COPS3-209ENST00000486810 TRBV23OR9-2A0A075B6M9 112 aa6.96□□□□□ -1.3
COPS3-209ENST00000486810 AGRPO00253 132 aa6.96□□□□□ -1.3
COPS3-209ENST00000486810 CPP00450 1065 aa6.96□□□□□ -1.3
COPS3-209ENST00000486810 GLI4P10075 376 aa6.96□□□□□ -1.3
COPS3-209ENST00000486810 VIPR1P32241 457 aa6.96□□□□□ -1.3
COPS3-209ENST00000486810 ANP32AP39687 249 aaKnown RBP6.96□□□□□ -1.3
COPS3-209ENST00000486810 KCNJ6P48051 423 aa6.96□□□□□ -1.3
COPS3-209ENST00000486810 CBX2Q14781 532 aaPredicted RBP6.96□□□□□ -1.3
COPS3-209ENST00000486810 ZNF124Q15973 351 aa6.96□□□□□ -1.3
COPS3-209ENST00000486810 ACBD5Q5T8D3 534 aaPredicted RBP6.96□□□□□ -1.3
COPS3-209ENST00000486810 FOXB2Q5VYV0 432 aa6.96□□□□□ -1.3
COPS3-209ENST00000486810 RPTNQ6XPR3 784 aa6.96□□□□□ -1.3
COPS3-209ENST00000486810 PLEKHO2Q8TD55 490 aa6.96□□□□□ -1.3
COPS3-209ENST00000486810 ZNF830Q96NB3 372 aaPredicted RBP6.96□□□□□ -1.3
COPS3-209ENST00000486810 DEPDC7Q96QD5 511 aa6.96□□□□□ -1.3
COPS3-209ENST00000486810 AARSD1Q9BTE6 412 aaKnown RBP6.96□□□□□ -1.3
COPS3-209ENST00000486810 SPATA9Q9BWV2 254 aa6.96□□□□□ -1.3
COPS3-209ENST00000486810 TMEM51Q9NW97 253 aa6.96□□□□□ -1.3
COPS3-209ENST00000486810 PLA2G2DQ9UNK4 145 aa6.96□□□□□ -1.3
COPS3-209ENST00000486810 A0A1W2PQ27 194 aa6.95□□□□□ -1.3
COPS3-209ENST00000486810 A0A1W2PQ64 194 aa6.95□□□□□ -1.3
COPS3-209ENST00000486810 A0A1W2PQC6 194 aa6.95□□□□□ -1.3
COPS3-209ENST00000486810 A0A1W2PQD8 194 aa6.95□□□□□ -1.3
COPS3-209ENST00000486810 NUDT19A8MXV4 375 aa6.95□□□□□ -1.3
COPS3-209ENST00000486810 SRGAP3O43295 1099 aa6.95□□□□□ -1.3
COPS3-209ENST00000486810 PEX10O60683 326 aa6.95□□□□□ -1.3
COPS3-209ENST00000486810 FGFR1P11362 822 aa6.95□□□□□ -1.3
COPS3-209ENST00000486810 ARL4AP40617 200 aa6.95□□□□□ -1.3
COPS3-209ENST00000486810 MAP4K2Q12851 820 aa6.95□□□□□ -1.3
COPS3-209ENST00000486810 NTRK3Q16288 839 aa6.95□□□□□ -1.3
COPS3-209ENST00000486810 MTERF2Q49AM1 385 aa6.95□□□□□ -1.3
COPS3-209ENST00000486810 E4F1Q66K89 784 aaPredicted RBP6.95□□□□□ -1.3
COPS3-209ENST00000486810 CILP2Q8IUL8 1156 aa6.95□□□□□ -1.3
COPS3-209ENST00000486810 PPIL6Q8IXY8 311 aa6.95□□□□□ -1.3
COPS3-209ENST00000486810 GPATCH11Q8N954 259 aa6.95□□□□□ -1.3
COPS3-209ENST00000486810 RCBTB1Q8NDN9 531 aa6.95□□□□□ -1.3
COPS3-209ENST00000486810 MKL1Q969V6 931 aa6.95□□□□□ -1.3
COPS3-209ENST00000486810 DRC1Q96MC2 740 aa6.95□□□□□ -1.3
COPS3-209ENST00000486810 SGPP1Q9BX95 441 aa6.95□□□□□ -1.3
COPS3-209ENST00000486810 MBD1Q9UIS9 605 aaPredicted RBP6.95□□□□□ -1.3
COPS3-209ENST00000486810 NPFFR2Q9Y5X5 522 aa6.95□□□□□ -1.3
COPS3-209ENST00000486810 IQCA1LA6NCM1 817 aa6.94□□□□□ -1.3
COPS3-209ENST00000486810 HRKO00198 91 aa6.94□□□□□ -1.3
COPS3-209ENST00000486810 ETV2O00321 342 aaPredicted RBP6.94□□□□□ -1.3
COPS3-209ENST00000486810 MEFVO15553 781 aaPredicted RBP6.94□□□□□ -1.3
COPS3-209ENST00000486810 PRODHO43272 600 aa6.94□□□□□ -1.3
COPS3-209ENST00000486810 NPHS1O60500 1241 aa6.94□□□□□ -1.3
COPS3-209ENST00000486810 MPOP05164 745 aa6.94□□□□□ -1.3
COPS3-209ENST00000486810 C1QTNF9P0C862 333 aa6.94□□□□□ -1.3
COPS3-209ENST00000486810 PABPC1P11940 636 aaKnown RBP6.94□□□□□ -1.3
COPS3-209ENST00000486810 RGS3P49796 1198 aa6.94□□□□□ -1.3
COPS3-209ENST00000486810 IRX3P78415 501 aaPredicted RBP6.94□□□□□ -1.3
COPS3-209ENST00000486810 RAB3GAP1Q15042 981 aa6.94□□□□□ -1.3
COPS3-209ENST00000486810 UTP14CQ5TAP6 766 aaKnown RBP6.94□□□□□ -1.3
COPS3-209ENST00000486810 BICRALQ6AI39 1079 aa6.94□□□□□ -1.3
COPS3-209ENST00000486810 LRP10Q7Z4F1 713 aa6.94□□□□□ -1.3
COPS3-209ENST00000486810 NLRP10Q86W26 655 aa6.94□□□□□ -1.3
COPS3-209ENST00000486810 LZTR1Q8N653 840 aa6.94□□□□□ -1.3
COPS3-209ENST00000486810 DIO2Q92813 273 aa6.94□□□□□ -1.3
COPS3-209ENST00000486810 SLC26A8Q96RN1 970 aa6.94□□□□□ -1.3
COPS3-209ENST00000486810 RXFP1Q9HBX9 757 aa6.94□□□□□ -1.3
COPS3-209ENST00000486810 TEX51A0A1B0GUA7 166 aa6.93□□□□□ -1.3
COPS3-209ENST00000486810 ZC3H12DA2A288 527 aaKnown RBP6.93□□□□□ -1.3
COPS3-209ENST00000486810 MSCO60682 206 aa6.93□□□□□ -1.3
COPS3-209ENST00000486810 FUCA1P04066 466 aa6.93□□□□□ -1.3
COPS3-209ENST00000486810 FAM153BP0C7A2 387 aa6.93□□□□□ -1.3
COPS3-209ENST00000486810 MED14OSP0DP75 135 aa6.93□□□□□ -1.3
COPS3-209ENST00000486810 SRSF3P84103 164 aaKnown RBP6.93□□□□□ -1.3
COPS3-209ENST00000486810 SSRP1Q08945 709 aaKnown RBP6.93□□□□□ -1.3
COPS3-209ENST00000486810 PLEKHN1Q494U1 663 aaPredicted RBP6.93□□□□□ -1.3
COPS3-209ENST00000486810 IQCEQ6IPM2 695 aa6.93□□□□□ -1.3
COPS3-209ENST00000486810 SMAP1Q8IYB5 467 aaPredicted RBP6.93□□□□□ -1.3
COPS3-209ENST00000486810 LRRC47Q8N1G4 583 aaKnown RBP6.93□□□□□ -1.3
COPS3-209ENST00000486810 KCTD13Q8WZ19 329 aa6.93□□□□□ -1.3
COPS3-209ENST00000486810 DNAJC7Q99615 494 aa6.93□□□□□ -1.3
COPS3-209ENST00000486810 OSBPL2Q9H1P3 480 aa6.93□□□□□ -1.3
COPS3-209ENST00000486810 CNTD2Q9H8S5 307 aa6.93□□□□□ -1.3
COPS3-209ENST00000486810 GOLGA2P5Q9HBQ8 144 aa6.93□□□□□ -1.3
COPS3-209ENST00000486810 HDAC5Q9UQL6 1122 aa6.93□□□□□ -1.3
COPS3-209ENST00000486810 TRAV20A0A0B4J274 112 aa6.92□□□□□ -1.3
COPS3-209ENST00000486810 BLACEA4D250 179 aa6.92□□□□□ -1.3
COPS3-209ENST00000486810 CYBBP04839 570 aa6.92□□□□□ -1.3
COPS3-209ENST00000486810 FPR2P25090 351 aa6.92□□□□□ -1.3
COPS3-209ENST00000486810 BCL6P41182 706 aa6.92□□□□□ -1.3
COPS3-209ENST00000486810 SOGA3Q5TF21 947 aa6.92□□□□□ -1.3
COPS3-209ENST00000486810 PAQR3Q6TCH7 311 aa6.92□□□□□ -1.3
COPS3-209ENST00000486810 Q8N1Y9 231 aa6.92□□□□□ -1.3
COPS3-209ENST00000486810 BHLHE22Q8NFJ8 381 aaPredicted RBP6.92□□□□□ -1.3
COPS3-209ENST00000486810 SRPK1Q96SB4 655 aaKnown RBP6.92□□□□□ -1.3
COPS3-209ENST00000486810 LNPKQ9C0E8 428 aa6.92□□□□□ -1.3
COPS3-209ENST00000486810 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.92□□□□□ -1.38e-7■■□□□ 11.5
COPS3-209ENST00000486810 MARCH2Q9P0N8 246 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms