RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 PHF20L1A8MW92 1017 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 PJA2O43164 708 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 PPIP5K2O43314 1243 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 MBD4O95243 580 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 TATP17735 454 aaPredicted RBP11.76□□□□□ -0.53
CCDC171-208ENST00000486641 MTIF2P46199 727 aaKnown RBP11.76□□□□□ -0.53
CCDC171-208ENST00000486641 SARNPP82979 210 aaKnown RBP11.76□□□□□ -0.53
CCDC171-208ENST00000486641 FUT2Q10981 343 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 NBPF9Q3BBW0 867 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 ANKRD40Q6AI12 368 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 HIBCHQ6NVY1 386 aaPredicted RBP11.76□□□□□ -0.53
CCDC171-208ENST00000486641 LRIG3Q6UXM1 1119 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 CCDC155Q8N6L0 562 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 GIMAP8Q8ND71 665 aaPredicted RBP11.76□□□□□ -0.53
CCDC171-208ENST00000486641 ARMC2Q8NEN0 867 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 NOC3LQ8WTT2 800 aaKnown RBP11.76□□□□□ -0.53
CCDC171-208ENST00000486641 NSMCE1Q8WV22 266 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 LPIN2Q92539 896 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 CUL5Q93034 780 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 TATDN2Q93075 761 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 STAMBPL1Q96FJ0 436 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 THOC1Q96FV9 657 aaKnown RBP11.76□□□□□ -0.53
CCDC171-208ENST00000486641 RNF14Q9UBS8 474 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 FBXO3Q9UK99 471 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 SLC4A4Q9Y6R1 1079 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 MYH2Q9UKX2 1941 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 LMTK3Q96Q04 1460 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 EME2A4GXA9 379 aaPredicted RBP11.76□□□□□ -0.53
CCDC171-208ENST00000486641 PRPF3O43395 683 aaKnown RBP11.76□□□□□ -0.53
CCDC171-208ENST00000486641 RAD51CO43502 376 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 PLEKHA8P1O95397 391 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 KCNB1Q14721 858 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 UAP1Q16222 522 aaPredicted RBP11.76□□□□□ -0.53
CCDC171-208ENST00000486641 NAALADL2Q58DX5 795 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 ODF2Q5BJF6 829 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 METTL24Q5JXM2 366 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 MSL1Q68DK7 614 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 RCSD1Q6JBY9 416 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 PIK3AP1Q6ZUJ8 805 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 TAX1BP1Q86VP1 789 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 DHX37Q8IY37 1157 aaKnown RBP11.76□□□□□ -0.53
CCDC171-208ENST00000486641 RAPGEF4Q8WZA2 1011 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 HOOK2Q96ED9 719 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 NOX5Q96PH1 765 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 EBF2Q9HAK2 575 aa11.76□□□□□ -0.53
CCDC171-208ENST00000486641 ADAMTS3O15072 1205 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 RHOBTB3O94955 611 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 GHRP10912 638 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 GCKP35557 465 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 RCAN1P53805 252 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 PPP2R2AP63151 447 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 GFPT1Q06210 699 aaPredicted RBP11.75□□□□□ -0.53
CCDC171-208ENST00000486641 ZNF844Q08AG5 666 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 PPP1R7Q15435 360 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 GKAP1Q5VSY0 366 aaPredicted RBP11.75□□□□□ -0.53
CCDC171-208ENST00000486641 TMC4Q7Z404 712 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 CPLX4Q7Z7G2 160 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 ZSCAN29Q8IWY8 852 aaPredicted RBP11.75□□□□□ -0.53
CCDC171-208ENST00000486641 SPDL1Q96EA4 605 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 PLIN2Q99541 437 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 KIF9Q9HAQ2 790 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 F8W031 263 aaPredicted RBP11.75□□□□□ -0.53
CCDC171-208ENST00000486641 BUB1BO60566 1050 aaPredicted RBP11.75□□□□□ -0.53
CCDC171-208ENST00000486641 DRD4P21917 467 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 ECHS1P30084 290 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 MYO1EQ12965 1108 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 MAGEB6Q8N7X4 407 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 LMBR1Q8WVP7 490 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 DHTKD1Q96HY7 919 aaPredicted RBP11.75□□□□□ -0.53
CCDC171-208ENST00000486641 ZNF512BQ96KM6 892 aaPredicted RBP11.75□□□□□ -0.53
CCDC171-208ENST00000486641 DNAJC5Q9H3Z4 198 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 TAF1DQ9H5J8 278 aaPredicted RBP11.75□□□□□ -0.53
CCDC171-208ENST00000486641 DISC1Q9NRI5 854 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 FAM207AQ9NSI2 230 aaPredicted RBP11.75□□□□□ -0.53
CCDC171-208ENST00000486641 TSKSQ9UJT2 592 aa11.75□□□□□ -0.53
CCDC171-208ENST00000486641 NOVA2Q9UNW9 492 aaKnown RBP11.75□□□□□ -0.53
CCDC171-208ENST00000486641 LRRC53A6NM62 1247 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 DCDC2CA8MYV0 355 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 ORC4O43929 436 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 FTCDO95954 541 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 PCCAP05165 728 aaPredicted RBP11.74□□□□□ -0.53
CCDC171-208ENST00000486641 PAEPP09466 180 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 CTNNA1P35221 906 aaKnown RBP11.74□□□□□ -0.53
CCDC171-208ENST00000486641 SLC1A4P43007 532 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 PHKA1P46020 1223 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 IFIT5Q13325 482 aaKnown RBP11.74□□□□□ -0.53
CCDC171-208ENST00000486641 HLTFQ14527 1009 aaKnown RBP eCLIP11.74□□□□□ -0.53
CCDC171-208ENST00000486641 SEC23AQ15436 765 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 ESCO1Q5FWF5 840 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 CHADLQ6NUI6 762 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 KLHL7Q8IXQ5 586 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 IFNL2Q8IZJ0 200 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 C4orf32Q8N8J7 132 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 P3H4Q92791 437 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 P2RX5Q93086 422 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 BATF3Q9NR55 127 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 RBM28Q9NW13 759 aaKnown RBP11.74□□□□□ -0.53
CCDC171-208ENST00000486641 PACSIN2Q9UNF0 486 aaPredicted RBP11.74□□□□□ -0.53
CCDC171-208ENST00000486641 L3MBTL1Q9Y468 752 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 NUP188Q5SRE5 1749 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms