RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 TMEM63BQ5T3F8 832 aa21.22■□□□□ 0.99
CLDN11-206ENST00000486429 ERICH6BQ5W0A0 696 aa21.22■□□□□ 0.99
CLDN11-206ENST00000486429 VTI1AQ96AJ9 217 aa21.22■□□□□ 0.99
CLDN11-206ENST00000486429 LZTS2Q9BRK4 669 aa21.22■□□□□ 0.99
CLDN11-206ENST00000486429 PPP4R2Q9NY27 417 aa21.22■□□□□ 0.99
CLDN11-206ENST00000486429 SLC12A7Q9Y666 1083 aa21.22■□□□□ 0.99
CLDN11-206ENST00000486429 A0A0U1RQG5 324 aaPredicted RBP21.21■□□□□ 0.99
CLDN11-206ENST00000486429 EIF2AK2P19525 551 aaKnown RBP21.21■□□□□ 0.99
CLDN11-206ENST00000486429 RXRAP19793 462 aa21.21■□□□□ 0.99
CLDN11-206ENST00000486429 TSGA10IPQ3SY00 556 aa21.21■□□□□ 0.99
CLDN11-206ENST00000486429 ARHGEF16Q5VV41 709 aa21.21■□□□□ 0.99
CLDN11-206ENST00000486429 SGMS1Q86VZ5 419 aa21.21■□□□□ 0.99
CLDN11-206ENST00000486429 RASEFQ8IZ41 740 aa21.21■□□□□ 0.99
CLDN11-206ENST00000486429 PIBF1Q8WXW3 757 aa21.21■□□□□ 0.99
CLDN11-206ENST00000486429 RRP36Q96EU6 259 aaKnown RBP21.21■□□□□ 0.99
CLDN11-206ENST00000486429 IWS1Q96ST2 819 aa21.21■□□□□ 0.99
CLDN11-206ENST00000486429 MAP3K20Q9NYL2 800 aaKnown RBP21.21■□□□□ 0.99
CLDN11-206ENST00000486429 MROH7Q68CQ1 1323 aa21.21■□□□□ 0.99
CLDN11-206ENST00000486429 BAZ2BQ9UIF8 2168 aaKnown RBP21.2■□□□□ 0.98
CLDN11-206ENST00000486429 NKRFO15226 690 aaKnown RBP eCLIP21.2■□□□□ 0.98
CLDN11-206ENST00000486429 CABYRO75952 493 aa21.2■□□□□ 0.98
CLDN11-206ENST00000486429 PLEKHA8P1O95397 391 aa21.2■□□□□ 0.98
CLDN11-206ENST00000486429 CXCL17Q6UXB2 119 aa21.2■□□□□ 0.98
CLDN11-206ENST00000486429 DHX32Q7L7V1 743 aaKnown RBP21.2■□□□□ 0.98
CLDN11-206ENST00000486429 ANKRD33Q7Z3H0 272 aa21.2■□□□□ 0.98
CLDN11-206ENST00000486429 MICU3Q86XE3 530 aa21.2■□□□□ 0.98
CLDN11-206ENST00000486429 RAB11FIP4Q86YS3 637 aa21.2■□□□□ 0.98
CLDN11-206ENST00000486429 SAMD3Q8N6K7 520 aa21.2■□□□□ 0.98
CLDN11-206ENST00000486429 OR6J1Q8NGC5 347 aa21.2■□□□□ 0.98
CLDN11-206ENST00000486429 TOX2Q96NM4 488 aa21.2■□□□□ 0.98
CLDN11-206ENST00000486429 PXMP2Q9NR77 195 aa21.2■□□□□ 0.98
CLDN11-206ENST00000486429 SEC63Q9UGP8 760 aaKnown RBP21.2■□□□□ 0.98
CLDN11-206ENST00000486429 DCDC2CA8MYV0 355 aa21.19■□□□□ 0.98
CLDN11-206ENST00000486429 GCOM1H8Y6P7 765 aaPredicted RBP21.19■□□□□ 0.98
CLDN11-206ENST00000486429 REC8O95072 547 aa21.19■□□□□ 0.98
CLDN11-206ENST00000486429 POLR2MP0CAP2 368 aa21.19■□□□□ 0.98
CLDN11-206ENST00000486429 SMARCA1P28370 1054 aa21.19■□□□□ 0.98
CLDN11-206ENST00000486429 HOXA13P31271 388 aaPredicted RBP21.19■□□□□ 0.98
CLDN11-206ENST00000486429 CPT1AP50416 773 aa21.19■□□□□ 0.98
CLDN11-206ENST00000486429 TTLL4Q14679 1199 aa21.19■□□□□ 0.98
CLDN11-206ENST00000486429 STXBP2Q15833 593 aa21.19■□□□□ 0.98
CLDN11-206ENST00000486429 ADCK5Q3MIX3 580 aa21.19■□□□□ 0.98
CLDN11-206ENST00000486429 SYNE3Q6ZMZ3 975 aa21.19■□□□□ 0.98
CLDN11-206ENST00000486429 SH3RF1Q7Z6J0 888 aa21.19■□□□□ 0.98
CLDN11-206ENST00000486429 TDHQ8IZJ6 230 aa21.19■□□□□ 0.98
CLDN11-206ENST00000486429 TCEANC2Q96MN5 208 aa21.19■□□□□ 0.98
CLDN11-206ENST00000486429 TRIM43BA6NCK2 446 aa21.18■□□□□ 0.98
CLDN11-206ENST00000486429 ARVCFO00192 962 aa21.18■□□□□ 0.98
CLDN11-206ENST00000486429 HMGB1P09429 215 aaKnown RBP21.18■□□□□ 0.98
CLDN11-206ENST00000486429 TXNP10599 105 aaKnown RBP21.18■□□□□ 0.98
CLDN11-206ENST00000486429 BRDTQ58F21 947 aaPredicted RBP21.18■□□□□ 0.98
CLDN11-206ENST00000486429 TRIM43Q96BQ3 446 aaPredicted RBP21.18■□□□□ 0.98
CLDN11-206ENST00000486429 NR3C2P08235 984 aa21.17■□□□□ 0.98
CLDN11-206ENST00000486429 HSPA4P34932 840 aa21.17■□□□□ 0.98
CLDN11-206ENST00000486429 EXOSC10Q01780 885 aaKnown RBP21.17■□□□□ 0.98
CLDN11-206ENST00000486429 APOA5Q6Q788 366 aa21.17■□□□□ 0.98
CLDN11-206ENST00000486429 SRBD1Q8N5C6 995 aaKnown RBP21.17■□□□□ 0.98
CLDN11-206ENST00000486429 TMEM39AQ9NV64 488 aa21.17■□□□□ 0.98
CLDN11-206ENST00000486429 POLR3EQ9NVU0 708 aa21.17■□□□□ 0.98
CLDN11-206ENST00000486429 KIAA0355O15063 1070 aa21.16■□□□□ 0.98
CLDN11-206ENST00000486429 ARIH2O95376 493 aa21.16■□□□□ 0.98
CLDN11-206ENST00000486429 CDK7P50613 346 aa21.16■□□□□ 0.98
CLDN11-206ENST00000486429 FAAP100Q0VG06 881 aa21.16■□□□□ 0.98
CLDN11-206ENST00000486429 SEPT14Q6ZU15 432 aa21.16■□□□□ 0.98
CLDN11-206ENST00000486429 TMTC3Q6ZXV5 915 aa21.16■□□□□ 0.98
CLDN11-206ENST00000486429 CMTR1Q8N1G2 835 aaKnown RBP21.16■□□□□ 0.98
CLDN11-206ENST00000486429 FANCBQ8NB91 859 aa21.16■□□□□ 0.98
CLDN11-206ENST00000486429 COPS5Q92905 334 aa21.16■□□□□ 0.98
CLDN11-206ENST00000486429 BADQ92934 168 aa21.16■□□□□ 0.98
CLDN11-206ENST00000486429 KCNB2Q92953 911 aa21.16■□□□□ 0.98
CLDN11-206ENST00000486429 PDCD2LQ9BRP1 358 aa21.16■□□□□ 0.98
CLDN11-206ENST00000486429 KIAA1217Q5T5P2 1943 aa21.16■□□□□ 0.98
CLDN11-206ENST00000486429 TLR3O15455 904 aaKnown RBP21.15■□□□□ 0.98
CLDN11-206ENST00000486429 EIF3JO75822 258 aaKnown RBP21.15■□□□□ 0.98
CLDN11-206ENST00000486429 CCDC62Q6P9F0 684 aa21.15■□□□□ 0.98
CLDN11-206ENST00000486429 FCHSD1Q86WN1 690 aa21.15■□□□□ 0.98
CLDN11-206ENST00000486429 FAM126BQ8IXS8 530 aa21.15■□□□□ 0.98
CLDN11-206ENST00000486429 JAKMIP1Q96N16 626 aaKnown RBP21.15■□□□□ 0.98
CLDN11-206ENST00000486429 RBM28Q9NW13 759 aaKnown RBP21.15■□□□□ 0.98
CLDN11-206ENST00000486429 ZBTB43O43298 467 aa21.14■□□□□ 0.97
CLDN11-206ENST00000486429 MYL3P08590 195 aa21.14■□□□□ 0.97
CLDN11-206ENST00000486429 MYCLP12524 364 aaPredicted RBP21.14■□□□□ 0.97
CLDN11-206ENST00000486429 RAG1P15918 1043 aa21.14■□□□□ 0.97
CLDN11-206ENST00000486429 FGD1P98174 961 aa21.14■□□□□ 0.97
CLDN11-206ENST00000486429 ITGA7Q13683 1181 aa21.14■□□□□ 0.97
CLDN11-206ENST00000486429 PGM5Q15124 567 aa21.14■□□□□ 0.97
CLDN11-206ENST00000486429 SEZ6LQ9BYH1 1024 aa21.14■□□□□ 0.97
CLDN11-206ENST00000486429 TBX21Q9UL17 535 aa21.14■□□□□ 0.97
CLDN11-206ENST00000486429 SNX14Q9Y5W7 946 aa21.14■□□□□ 0.97
CLDN11-206ENST00000486429 KLF18A0A0U1RQI7 1052 aa21.13■□□□□ 0.97
CLDN11-206ENST00000486429 GH1P01241 217 aa21.13■□□□□ 0.97
CLDN11-206ENST00000486429 CCND2P30279 289 aa21.13■□□□□ 0.97
CLDN11-206ENST00000486429 PSMC6P62333 389 aa21.13■□□□□ 0.97
CLDN11-206ENST00000486429 PURAQ00577 322 aaKnown RBP21.13■□□□□ 0.97
CLDN11-206ENST00000486429 RTN1Q16799 776 aa21.13■□□□□ 0.97
CLDN11-206ENST00000486429 BLOC1S2Q6QNY1 142 aa21.13■□□□□ 0.97
CLDN11-206ENST00000486429 SLC43A3Q8NBI5 491 aa21.13■□□□□ 0.97
CLDN11-206ENST00000486429 IL31RAQ8NI17 732 aa21.13■□□□□ 0.97
CLDN11-206ENST00000486429 CUL5Q93034 780 aa21.13■□□□□ 0.97
CLDN11-206ENST00000486429 MTG1Q9BT17 334 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms