RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 OR6J1Q8NGC5 347 aa12.78□□□□□ -0.36
SNX21-211ENST00000486336 MAP3K14Q99558 947 aa12.78□□□□□ -0.36
SNX21-211ENST00000486336 LZTS2Q9BRK4 669 aa12.78□□□□□ -0.36
SNX21-211ENST00000486336 PRO3102Q9H379 93 aa12.78□□□□□ -0.36
SNX21-211ENST00000486336 SEC63Q9UGP8 760 aaKnown RBP12.78□□□□□ -0.36
SNX21-211ENST00000486336 TRIOBPQ9H2D6 2365 aa12.77□□□□□ -0.36
SNX21-211ENST00000486336 A0A0U1RQG5 324 aaPredicted RBP12.77□□□□□ -0.37
SNX21-211ENST00000486336 GCOM1H8Y6P7 765 aaPredicted RBP12.77□□□□□ -0.37
SNX21-211ENST00000486336 CTAGE5O15320 804 aa12.77□□□□□ -0.37
SNX21-211ENST00000486336 PLEKHA8P1O95397 391 aa12.77□□□□□ -0.37
SNX21-211ENST00000486336 MYL3P08590 195 aa12.77□□□□□ -0.37
SNX21-211ENST00000486336 CLTBP09497 229 aa12.77□□□□□ -0.37
SNX21-211ENST00000486336 POLR2MP0CAP2 368 aa12.77□□□□□ -0.37
SNX21-211ENST00000486336 TXNP10599 105 aaKnown RBP12.77□□□□□ -0.37
SNX21-211ENST00000486336 MYCLP12524 364 aaPredicted RBP12.77□□□□□ -0.37
SNX21-211ENST00000486336 EDNRBP24530 442 aa12.77□□□□□ -0.37
SNX21-211ENST00000486336 BMP8BP34820 402 aa12.77□□□□□ -0.37
SNX21-211ENST00000486336 FXR1P51114 621 aaKnown RBP eCLIP12.77□□□□□ -0.37
SNX21-211ENST00000486336 TTLL4Q14679 1199 aa12.77□□□□□ -0.37
SNX21-211ENST00000486336 C1orf53Q5VUE5 145 aa12.77□□□□□ -0.37
SNX21-211ENST00000486336 ERICH6BQ5W0A0 696 aa12.77□□□□□ -0.37
SNX21-211ENST00000486336 FCHSD1Q86WN1 690 aa12.77□□□□□ -0.37
SNX21-211ENST00000486336 MICU3Q86XE3 530 aa12.77□□□□□ -0.37
SNX21-211ENST00000486336 SRBD1Q8N5C6 995 aaKnown RBP12.77□□□□□ -0.37
SNX21-211ENST00000486336 SCFD2Q8WU76 684 aa12.77□□□□□ -0.37
SNX21-211ENST00000486336 COPS5Q92905 334 aa12.77□□□□□ -0.37
SNX21-211ENST00000486336 IWS1Q96ST2 819 aa12.77□□□□□ -0.37
SNX21-211ENST00000486336 MAF1Q9H063 256 aa12.77□□□□□ -0.37
SNX21-211ENST00000486336 PDLIM7Q9NR12 457 aa12.77□□□□□ -0.37
SNX21-211ENST00000486336 TMEM39AQ9NV64 488 aa12.77□□□□□ -0.37
SNX21-211ENST00000486336 Q9Y3F1 56 aa12.77□□□□□ -0.37
SNX21-211ENST00000486336 ELP1O95163 1332 aa12.77□□□□□ -0.37
SNX21-211ENST00000486336 RBM47A0AV96 593 aaKnown RBP12.76□□□□□ -0.37
SNX21-211ENST00000486336 TRIM43BA6NCK2 446 aa12.76□□□□□ -0.37
SNX21-211ENST00000486336 ARVCFO00192 962 aa12.76□□□□□ -0.37
SNX21-211ENST00000486336 OPLAHO14841 1288 aa12.76□□□□□ -0.37
SNX21-211ENST00000486336 REC8O95072 547 aa12.76□□□□□ -0.37
SNX21-211ENST00000486336 NR3C2P08235 984 aa12.76□□□□□ -0.37
SNX21-211ENST00000486336 HSD17B4P51659 736 aa12.76□□□□□ -0.37
SNX21-211ENST00000486336 EXOSC10Q01780 885 aaKnown RBP12.76□□□□□ -0.37
SNX21-211ENST00000486336 TSGA10IPQ3SY00 556 aa12.76□□□□□ -0.37
SNX21-211ENST00000486336 BRDTQ58F21 947 aaPredicted RBP12.76□□□□□ -0.37
SNX21-211ENST00000486336 FANCBQ8NB91 859 aa12.76□□□□□ -0.37
SNX21-211ENST00000486336 BADQ92934 168 aa12.76□□□□□ -0.37
SNX21-211ENST00000486336 TRIM43Q96BQ3 446 aaPredicted RBP12.76□□□□□ -0.37
SNX21-211ENST00000486336 JAKMIP1Q96N16 626 aaKnown RBP12.76□□□□□ -0.37
SNX21-211ENST00000486336 SPZ1Q9BXG8 430 aa12.76□□□□□ -0.37
SNX21-211ENST00000486336 PXMP2Q9NR77 195 aa12.76□□□□□ -0.37
SNX21-211ENST00000486336 hCG_1642624A0A1W2PR95 340 aa12.75□□□□□ -0.37
SNX21-211ENST00000486336 NKRFO15226 690 aaKnown RBP eCLIP12.75□□□□□ -0.37
SNX21-211ENST00000486336 TLR3O15455 904 aaKnown RBP12.75□□□□□ -0.37
SNX21-211ENST00000486336 CABYRO75952 493 aa12.75□□□□□ -0.37
SNX21-211ENST00000486336 ARIH2O95376 493 aa12.75□□□□□ -0.37
SNX21-211ENST00000486336 HMGB1P09429 215 aaKnown RBP12.75□□□□□ -0.37
SNX21-211ENST00000486336 CPA1P15085 419 aa12.75□□□□□ -0.37
SNX21-211ENST00000486336 RAG1P15918 1043 aa12.75□□□□□ -0.37
SNX21-211ENST00000486336 SMARCA1P28370 1054 aa12.75□□□□□ -0.37
SNX21-211ENST00000486336 CPT1AP50416 773 aa12.75□□□□□ -0.37
SNX21-211ENST00000486336 CHMP4BP1P59074 171 aa12.75□□□□□ -0.37
SNX21-211ENST00000486336 PSMC6P62333 389 aa12.75□□□□□ -0.37
SNX21-211ENST00000486336 NKX3-2P78367 333 aa12.75□□□□□ -0.37
SNX21-211ENST00000486336 ITGA7Q13683 1181 aa12.75□□□□□ -0.37
SNX21-211ENST00000486336 LY6KQ17RY6 165 aa12.75□□□□□ -0.37
SNX21-211ENST00000486336 DNAH12Q6ZR08 3092 aa12.75□□□□□ -0.37
SNX21-211ENST00000486336 SGMS1Q86VZ5 419 aa12.75□□□□□ -0.37
SNX21-211ENST00000486336 SAMD3Q8N6K7 520 aa12.75□□□□□ -0.37
SNX21-211ENST00000486336 CUL5Q93034 780 aa12.75□□□□□ -0.37
SNX21-211ENST00000486336 ZFP91Q96JP5 570 aaPredicted RBP12.75□□□□□ -0.37
SNX21-211ENST00000486336 MAP3K20Q9NYL2 800 aaKnown RBP12.75□□□□□ -0.37
SNX21-211ENST00000486336 SNX14Q9Y5W7 946 aa12.75□□□□□ -0.37
SNX21-211ENST00000486336 LRRC37A2A6NM11 1700 aa12.74□□□□□ -0.37
SNX21-211ENST00000486336 MROH7Q68CQ1 1323 aa12.74□□□□□ -0.37
SNX21-211ENST00000486336 KLF18A0A0U1RQI7 1052 aa12.74□□□□□ -0.37
SNX21-211ENST00000486336 A0A1W2PPC1 479 aa12.74□□□□□ -0.37
SNX21-211ENST00000486336 ZBTB43O43298 467 aa12.74□□□□□ -0.37
SNX21-211ENST00000486336 EIF3JO75822 258 aaKnown RBP12.74□□□□□ -0.37
SNX21-211ENST00000486336 SLC34A2O95436 690 aa12.74□□□□□ -0.37
SNX21-211ENST00000486336 HSPA4P34932 840 aa12.74□□□□□ -0.37
SNX21-211ENST00000486336 FAAP100Q0VG06 881 aa12.74□□□□□ -0.37
SNX21-211ENST00000486336 RTN1Q16799 776 aa12.74□□□□□ -0.37
SNX21-211ENST00000486336 BLOC1S2Q6QNY1 142 aa12.74□□□□□ -0.37
SNX21-211ENST00000486336 Q6ZUG5 572 aa12.74□□□□□ -0.37
SNX21-211ENST00000486336 ANKRD33Q7Z3H0 272 aa12.74□□□□□ -0.37
SNX21-211ENST00000486336 TDHQ8IZJ6 230 aa12.74□□□□□ -0.37
SNX21-211ENST00000486336 SMARCC2Q8TAQ2 1214 aa12.74□□□□□ -0.37
SNX21-211ENST00000486336 TOX2Q96NM4 488 aa12.74□□□□□ -0.37
SNX21-211ENST00000486336 POLR3EQ9NVU0 708 aa12.74□□□□□ -0.37
SNX21-211ENST00000486336 BRPF3Q9ULD4 1205 aa12.74□□□□□ -0.37
SNX21-211ENST00000486336 GOLGA8AA7E2F4 631 aa12.73□□□□□ -0.37
SNX21-211ENST00000486336 GOLGA8BA8MQT2 603 aa12.73□□□□□ -0.37
SNX21-211ENST00000486336 SORBS3O60504 671 aa12.73□□□□□ -0.37
SNX21-211ENST00000486336 GH1P01241 217 aa12.73□□□□□ -0.37
SNX21-211ENST00000486336 PSMA5P28066 241 aa12.73□□□□□ -0.37
SNX21-211ENST00000486336 CCND2P30279 289 aa12.73□□□□□ -0.37
SNX21-211ENST00000486336 CDK7P50613 346 aa12.73□□□□□ -0.37
SNX21-211ENST00000486336 PGM5Q15124 567 aa12.73□□□□□ -0.37
SNX21-211ENST00000486336 APOA5Q6Q788 366 aa12.73□□□□□ -0.37
SNX21-211ENST00000486336 USP17L6PQ6QN14 398 aa12.73□□□□□ -0.37
SNX21-211ENST00000486336 TMTC3Q6ZXV5 915 aa12.73□□□□□ -0.37
SNX21-211ENST00000486336 PDCD2LQ9BRP1 358 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms