RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 ARMCX5Q6P1M9 558 aa13.43□□□□□ -0.26
PKP4-213ENST00000486254 SV2BQ7L1I2 683 aa13.43□□□□□ -0.26
PKP4-213ENST00000486254 TRMT44Q8IYL2 757 aaKnown RBP13.43□□□□□ -0.26
PKP4-213ENST00000486254 ANKRD20A12PQ8NF67 263 aa13.43□□□□□ -0.26
PKP4-213ENST00000486254 LARP4BQ92615 738 aaKnown RBP13.43□□□□□ -0.26
PKP4-213ENST00000486254 FAM20AQ96MK3 541 aa13.43□□□□□ -0.26
PKP4-213ENST00000486254 NAP1L5Q96NT1 182 aaPredicted RBP13.43□□□□□ -0.26
PKP4-213ENST00000486254 TMEM39BQ9GZU3 492 aa13.43□□□□□ -0.26
PKP4-213ENST00000486254 BLZF1Q9H2G9 400 aa13.43□□□□□ -0.26
PKP4-213ENST00000486254 TMX1Q9H3N1 280 aa13.43□□□□□ -0.26
PKP4-213ENST00000486254 ADD3Q9UEY8 706 aaKnown RBP13.43□□□□□ -0.26
PKP4-213ENST00000486254 LIMA1Q9UHB6 759 aaKnown RBP13.43□□□□□ -0.26
PKP4-213ENST00000486254 FEM1BQ9UK73 627 aa13.43□□□□□ -0.26
PKP4-213ENST00000486254 BICDL2A1A5D9 508 aa13.42□□□□□ -0.26
PKP4-213ENST00000486254 SPDYE3A6NKU9 549 aa13.42□□□□□ -0.26
PKP4-213ENST00000486254 CASP1P29466 404 aa13.42□□□□□ -0.26
PKP4-213ENST00000486254 PBX1P40424 430 aa13.42□□□□□ -0.26
PKP4-213ENST00000486254 TXKP42681 527 aa13.42□□□□□ -0.26
PKP4-213ENST00000486254 FILIP1LQ4L180 1135 aa13.42□□□□□ -0.26
PKP4-213ENST00000486254 SAMD3Q8N6K7 520 aa13.42□□□□□ -0.26
PKP4-213ENST00000486254 LRRC15Q8TF66 581 aa13.42□□□□□ -0.26
PKP4-213ENST00000486254 HOOK2Q96ED9 719 aa13.42□□□□□ -0.26
PKP4-213ENST00000486254 CDK5RAP3Q96JB5 506 aa13.42□□□□□ -0.26
PKP4-213ENST00000486254 TEPSINQ96N21 525 aa13.42□□□□□ -0.26
PKP4-213ENST00000486254 THAP9Q9H5L6 903 aa13.42□□□□□ -0.26
PKP4-213ENST00000486254 SAMSN1Q9NSI8 373 aaKnown RBP13.42□□□□□ -0.26
PKP4-213ENST00000486254 BLOC1S4Q9NUP1 217 aa13.42□□□□□ -0.26
PKP4-213ENST00000486254 PCDHA12Q9UN75 941 aa13.42□□□□□ -0.26
PKP4-213ENST00000486254 CTNND2Q9UQB3 1225 aa13.42□□□□□ -0.26
PKP4-213ENST00000486254 RABGAP1Q9Y3P9 1069 aa13.42□□□□□ -0.26
PKP4-213ENST00000486254 DOCK1Q14185 1865 aa13.42□□□□□ -0.26
PKP4-213ENST00000486254 ABCB11O95342 1321 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 PHF20L1A8MW92 1017 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 USP17L15C9J2P7 530 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 USP17L13C9JLJ4 530 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 USP17L11C9JVI0 530 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 USP17L18D6R9N7 530 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 USP17L22D6RA61 530 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 USP17L17D6RBQ6 530 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 USP17L19D6RCP7 530 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 USP17L20D6RJB6 530 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 OPLAHO14841 1288 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 EEF1GP26641 437 aaKnown RBP13.41□□□□□ -0.26
PKP4-213ENST00000486254 PRCPP42785 496 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 USP17L24Q0WX57 530 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 IKQ13123 557 aaPredicted RBP13.41□□□□□ -0.26
PKP4-213ENST00000486254 PSMD2Q13200 908 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 HAUS3Q68CZ6 603 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 USP17L6PQ6QN14 398 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 UNC13DQ70J99 1090 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 ETNPPLQ8TBG4 499 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 NELFBQ8WX92 580 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 RAD54LQ92698 747 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 PNMA5Q96PV4 448 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 NUP88Q99567 741 aaPredicted RBP13.41□□□□□ -0.26
PKP4-213ENST00000486254 KIAA1683Q9H0B3 1180 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 EHMT1Q9H9B1 1298 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 EXOC1Q9NV70 894 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 WDR46O15213 610 aaKnown RBP13.41□□□□□ -0.26
PKP4-213ENST00000486254 CTNND1O60716 968 aaKnown RBP13.41□□□□□ -0.26
PKP4-213ENST00000486254 ECE1P42892 770 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 EHHADHQ08426 723 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 TRIM14Q14142 442 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 RASA3Q14644 834 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 NBPF9Q3BBW0 867 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 KLHL10Q6JEL2 608 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 ACER1Q8TDN7 264 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 SNX29Q8TEQ0 813 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 STAMQ92783 540 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 LENG9Q96B70 501 aa13.41□□□□□ -0.26
PKP4-213ENST00000486254 MRPL11Q9Y3B7 192 aaKnown RBP13.41□□□□□ -0.26
PKP4-213ENST00000486254 POTEMA6NI47 508 aa13.4□□□□□ -0.26
PKP4-213ENST00000486254 RAD21O60216 631 aa13.4□□□□□ -0.26
PKP4-213ENST00000486254 FDX1P10109 184 aa13.4□□□□□ -0.26
PKP4-213ENST00000486254 CCNE1P24864 410 aa13.4□□□□□ -0.26
PKP4-213ENST00000486254 TPD52L1Q16890 204 aaPredicted RBP13.4□□□□□ -0.26
PKP4-213ENST00000486254 TTI2Q6NXR4 508 aa13.4□□□□□ -0.26
PKP4-213ENST00000486254 SMYD4Q8IYR2 804 aaPredicted RBP13.4□□□□□ -0.26
PKP4-213ENST00000486254 CCDC51Q96ER9 411 aa13.4□□□□□ -0.26
PKP4-213ENST00000486254 MAP3K20Q9NYL2 800 aaKnown RBP13.4□□□□□ -0.26
PKP4-213ENST00000486254 RBBP6Q7Z6E9 1792 aaKnown RBP13.4□□□□□ -0.26
PKP4-213ENST00000486254 PITPNM2Q9BZ72 1349 aa13.39□□□□□ -0.27
PKP4-213ENST00000486254 ARHGAP6O43182 974 aa13.39□□□□□ -0.27
PKP4-213ENST00000486254 STX10O60499 249 aa13.39□□□□□ -0.27
PKP4-213ENST00000486254 MUTP22033 750 aa13.39□□□□□ -0.27
PKP4-213ENST00000486254 FECHP22830 423 aa13.39□□□□□ -0.27
PKP4-213ENST00000486254 GTF2F1P35269 517 aaKnown RBP eCLIP13.39□□□□□ -0.27
PKP4-213ENST00000486254 PTGER2P43116 358 aa13.39□□□□□ -0.27
PKP4-213ENST00000486254 ASIC1P78348 528 aa13.39□□□□□ -0.27
PKP4-213ENST00000486254 SPIRE1Q08AE8 756 aa13.39□□□□□ -0.27
PKP4-213ENST00000486254 ARID5BQ14865 1188 aa13.39□□□□□ -0.27
PKP4-213ENST00000486254 TCP11X2Q5H9J9 407 aa13.39□□□□□ -0.27
PKP4-213ENST00000486254 FAM83BQ5T0W9 1011 aa13.39□□□□□ -0.27
PKP4-213ENST00000486254 DCAF15Q66K64 600 aa13.39□□□□□ -0.27
PKP4-213ENST00000486254 NYAP1Q6ZVC0 841 aa13.39□□□□□ -0.27
PKP4-213ENST00000486254 FAM114A1Q8IWE2 563 aa13.39□□□□□ -0.27
PKP4-213ENST00000486254 CCAR2Q8N163 923 aaKnown RBP13.39□□□□□ -0.27
PKP4-213ENST00000486254 GUF1Q8N442 669 aaKnown RBP13.39□□□□□ -0.27
PKP4-213ENST00000486254 ERMNQ8TAM6 284 aa13.39□□□□□ -0.27
PKP4-213ENST00000486254 PANX2Q96RD6 677 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms