RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 RWDD3Q9Y3V2 267 aa8.66□□□□□ -1.02
RTN4-214ENST00000486085 PCDHA9Q9Y5H5 950 aa8.66□□□□□ -1.02
RTN4-214ENST00000486085 SBNO2Q9Y2G9 1366 aa8.65□□□□□ -1.02
RTN4-214ENST00000486085 RFPL3O75679 317 aa8.65□□□□□ -1.02
RTN4-214ENST00000486085 CRTAMO95727 393 aa8.65□□□□□ -1.02
RTN4-214ENST00000486085 EFEMP2O95967 443 aa8.65□□□□□ -1.02
RTN4-214ENST00000486085 AFMP43652 599 aa8.65□□□□□ -1.02
RTN4-214ENST00000486085 GUCY1A3Q02108 690 aa8.65□□□□□ -1.02
RTN4-214ENST00000486085 MVKQ03426 396 aa8.65□□□□□ -1.02
RTN4-214ENST00000486085 DALRD3Q5D0E6 543 aaKnown RBP8.65□□□□□ -1.02
RTN4-214ENST00000486085 LBX2Q6XYB7 198 aa8.65□□□□□ -1.02
RTN4-214ENST00000486085 ZNF662Q6ZS27 426 aa8.65□□□□□ -1.02
RTN4-214ENST00000486085 BRAPQ7Z569 592 aa8.65□□□□□ -1.02
RTN4-214ENST00000486085 MTDHQ86UE4 582 aaKnown RBP8.65□□□□□ -1.02
RTN4-214ENST00000486085 DHX37Q8IY37 1157 aaKnown RBP8.65□□□□□ -1.02
RTN4-214ENST00000486085 LILRA2Q8N149 483 aa8.65□□□□□ -1.02
RTN4-214ENST00000486085 GSTCDQ8NEC7 633 aa8.65□□□□□ -1.02
RTN4-214ENST00000486085 ABHD4Q8TB40 342 aa8.65□□□□□ -1.02
RTN4-214ENST00000486085 FBXL7Q9UJT9 491 aa8.65□□□□□ -1.02
RTN4-214ENST00000486085 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.65□□□□□ -1.02
RTN4-214ENST00000486085 PCDHA8Q9Y5H6 950 aa8.65□□□□□ -1.02
RTN4-214ENST00000486085 FUCA1P04066 466 aa8.64□□□□□ -1.03
RTN4-214ENST00000486085 MSL3P1P0C860 447 aa8.64□□□□□ -1.03
RTN4-214ENST00000486085 TACR1P25103 407 aa8.64□□□□□ -1.03
RTN4-214ENST00000486085 LSAMPQ13449 338 aa8.64□□□□□ -1.03
RTN4-214ENST00000486085 CEP68Q76N32 757 aa8.64□□□□□ -1.03
RTN4-214ENST00000486085 FGD2Q7Z6J4 655 aa8.64□□□□□ -1.03
RTN4-214ENST00000486085 TEX2Q8IWB9 1127 aa8.64□□□□□ -1.03
RTN4-214ENST00000486085 NLGN2Q8NFZ4 835 aa8.64□□□□□ -1.03
RTN4-214ENST00000486085 NINJ1Q92982 152 aa8.64□□□□□ -1.03
RTN4-214ENST00000486085 SCLYQ96I15 445 aa8.64□□□□□ -1.03
RTN4-214ENST00000486085 MAGEB10Q96LZ2 347 aaPredicted RBP8.64□□□□□ -1.03
RTN4-214ENST00000486085 MARCH2Q9P0N8 246 aa8.64□□□□□ -1.03
RTN4-214ENST00000486085 ACSL6Q9UKU0 697 aa8.64□□□□□ -1.03
RTN4-214ENST00000486085 UNC13AQ9UPW8 1703 aa8.63□□□□□ -1.03
RTN4-214ENST00000486085 A0A1W2PQJ5 194 aa8.63□□□□□ -1.03
RTN4-214ENST00000486085 KCNQ2O43526 872 aa8.63□□□□□ -1.03
RTN4-214ENST00000486085 RASGRP1O95267 797 aa8.63□□□□□ -1.03
RTN4-214ENST00000486085 SDSP20132 328 aa8.63□□□□□ -1.03
RTN4-214ENST00000486085 GTF2A2P52657 109 aa8.63□□□□□ -1.03
RTN4-214ENST00000486085 CYP4F8P98187 520 aa8.63□□□□□ -1.03
RTN4-214ENST00000486085 FYB2Q5VWT5 728 aa8.63□□□□□ -1.03
RTN4-214ENST00000486085 NLRX1Q86UT6 975 aa8.63□□□□□ -1.03
RTN4-214ENST00000486085 NIM1KQ8IY84 436 aa8.63□□□□□ -1.03
RTN4-214ENST00000486085 FLAD1Q8NFF5 587 aa8.63□□□□□ -1.03
RTN4-214ENST00000486085 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.63□□□□□ -1.033e-47■□□□□ 9.6
RTN4-214ENST00000486085 USP33Q8TEY7 942 aa8.63□□□□□ -1.03
RTN4-214ENST00000486085 TRIM39Q9HCM9 518 aa8.63□□□□□ -1.03
RTN4-214ENST00000486085 IRS4O14654 1257 aaPredicted RBP8.62□□□□□ -1.03
RTN4-214ENST00000486085 CORO7P57737 925 aa8.62□□□□□ -1.03
RTN4-214ENST00000486085 SNX17Q15036 470 aa8.62□□□□□ -1.03
RTN4-214ENST00000486085 KIZQ2M2Z5 673 aa8.62□□□□□ -1.03
RTN4-214ENST00000486085 TAF7LQ5H9L4 462 aa8.62□□□□□ -1.03
RTN4-214ENST00000486085 CBLL1Q75N03 491 aa8.62□□□□□ -1.03
RTN4-214ENST00000486085 Q8N3U1 123 aa8.62□□□□□ -1.03
RTN4-214ENST00000486085 LZTR1Q8N653 840 aa8.62□□□□□ -1.03
RTN4-214ENST00000486085 TRMT2BQ96GJ1 504 aaKnown RBP8.62□□□□□ -1.03
RTN4-214ENST00000486085 TMEM169Q96HH4 297 aa8.62□□□□□ -1.03
RTN4-214ENST00000486085 KIRREL1Q96J84 757 aa8.62□□□□□ -1.03
RTN4-214ENST00000486085 PDLIM7Q9NR12 457 aa8.62□□□□□ -1.03
RTN4-214ENST00000486085 CLDND1Q9NY35 253 aa8.62□□□□□ -1.03
RTN4-214ENST00000486085 PPARGC1AQ9UBK2 798 aaKnown RBP8.62□□□□□ -1.03
RTN4-214ENST00000486085 ADGRE2Q9UHX3 823 aa8.62□□□□□ -1.03
RTN4-214ENST00000486085 PLAAQ9Y263 795 aa8.62□□□□□ -1.03
RTN4-214ENST00000486085 BICRAQ9NZM4 1560 aa8.61□□□□□ -1.03
RTN4-214ENST00000486085 C22orf46C9J442 243 aa8.61□□□□□ -1.03
RTN4-214ENST00000486085 DNAJC8O75937 253 aaPredicted RBP8.61□□□□□ -1.03
RTN4-214ENST00000486085 APPP05067 770 aa8.61□□□□□ -1.03
RTN4-214ENST00000486085 FPR2P25090 351 aa8.61□□□□□ -1.03
RTN4-214ENST00000486085 CANXP27824 592 aaKnown RBP8.61□□□□□ -1.03
RTN4-214ENST00000486085 ATG4DQ86TL0 474 aaPredicted RBP8.61□□□□□ -1.03
RTN4-214ENST00000486085 NLRP10Q86W26 655 aa8.61□□□□□ -1.03
RTN4-214ENST00000486085 SHISA4Q96DD7 197 aa8.61□□□□□ -1.03
RTN4-214ENST00000486085 ALG1Q9BT22 464 aa8.61□□□□□ -1.03
RTN4-214ENST00000486085 MTA3Q9BTC8 594 aa8.61□□□□□ -1.03
RTN4-214ENST00000486085 RNF32Q9H0A6 362 aa8.61□□□□□ -1.03
RTN4-214ENST00000486085 SOD2P04179 222 aa8.6□□□□□ -1.03
RTN4-214ENST00000486085 SRGAP2CP0DJJ0 459 aa8.6□□□□□ -1.03
RTN4-214ENST00000486085 PNLIPP16233 465 aa8.6□□□□□ -1.03
RTN4-214ENST00000486085 NAT1P18440 290 aa8.6□□□□□ -1.03
RTN4-214ENST00000486085 PAK1Q13153 545 aa8.6□□□□□ -1.03
RTN4-214ENST00000486085 BICRALQ6AI39 1079 aa8.6□□□□□ -1.03
RTN4-214ENST00000486085 CNNM4Q6P4Q7 775 aa8.6□□□□□ -1.03
RTN4-214ENST00000486085 PLEKHO2Q8TD55 490 aa8.6□□□□□ -1.03
RTN4-214ENST00000486085 JAM3Q9BX67 310 aa8.6□□□□□ -1.03
RTN4-214ENST00000486085 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.6□□□□□ -1.038e-10■■■■■ 32.5
RTN4-214ENST00000486085 FBLN5Q9UBX5 448 aa8.6□□□□□ -1.03
RTN4-214ENST00000486085 TNPO3Q9Y5L0 923 aaKnown RBP8.6□□□□□ -1.03
RTN4-214ENST00000486085 SCRIBQ14160 1630 aa8.59□□□□□ -1.03
RTN4-214ENST00000486085 TCRBV16S1A1N1A0A5B0 115 aa8.59□□□□□ -1.03
RTN4-214ENST00000486085 OPA1O60313 960 aa8.59□□□□□ -1.03
RTN4-214ENST00000486085 ARL4AP40617 200 aa8.59□□□□□ -1.03
RTN4-214ENST00000486085 MFSD3Q96ES6 412 aa8.59□□□□□ -1.03
RTN4-214ENST00000486085 KCNJ15Q99712 375 aa8.59□□□□□ -1.03
RTN4-214ENST00000486085 IPPKQ9H8X2 491 aa8.59□□□□□ -1.03
RTN4-214ENST00000486085 CRTAC1Q9NQ79 661 aa8.59□□□□□ -1.03
RTN4-214ENST00000486085 MAGEC2Q9UBF1 373 aaPredicted RBP8.59□□□□□ -1.03
RTN4-214ENST00000486085 H7BY64 318 aa8.58□□□□□ -1.04
RTN4-214ENST00000486085 ASLP04424 464 aa8.58□□□□□ -1.04
RTN4-214ENST00000486085 SDHBP21912 280 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 436.8 ms