RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 EIF2AK2P19525 551 aaKnown RBP21.32■■□□□ 1
COL1A1-206ENST00000485870 HOXA13P31271 388 aaPredicted RBP21.32■■□□□ 1
COL1A1-206ENST00000485870 ARHGEF16Q5VV41 709 aa21.32■■□□□ 1
COL1A1-206ENST00000485870 SEC63Q9UGP8 760 aaKnown RBP21.32■■□□□ 1
COL1A1-206ENST00000485870 RBM47A0AV96 593 aaKnown RBP21.31■■□□□ 1
COL1A1-206ENST00000485870 SMARCA1P28370 1054 aa21.31■■□□□ 1
COL1A1-206ENST00000485870 MAGEA10P43363 369 aaPredicted RBP21.31■■□□□ 1
COL1A1-206ENST00000485870 FSCN1Q16658 493 aaKnown RBP21.31■■□□□ 1
COL1A1-206ENST00000485870 DUSP28Q4G0W2 176 aa21.31■■□□□ 1
COL1A1-206ENST00000485870 C1orf53Q5VUE5 145 aa21.31■■□□□ 1
COL1A1-206ENST00000485870 APOA5Q6Q788 366 aa21.31■■□□□ 1
COL1A1-206ENST00000485870 CCDC82Q8N4S0 544 aa21.31■■□□□ 1
COL1A1-206ENST00000485870 FANCBQ8NB91 859 aa21.31■■□□□ 1
COL1A1-206ENST00000485870 VTI1AQ96AJ9 217 aa21.31■■□□□ 1
COL1A1-206ENST00000485870 GLT1D1Q96MS3 346 aa21.31■■□□□ 1
COL1A1-206ENST00000485870 PRO3102Q9H379 93 aa21.31■■□□□ 1
COL1A1-206ENST00000485870 PRDM5Q9NQX1 630 aaPredicted RBP21.31■■□□□ 1
COL1A1-206ENST00000485870 GCOM1H8Y6P7 765 aaPredicted RBP21.3■■□□□ 1
COL1A1-206ENST00000485870 POLR2MP0CAP2 368 aa21.3■■□□□ 1
COL1A1-206ENST00000485870 NKX3-2P78367 333 aa21.3■■□□□ 1
COL1A1-206ENST00000485870 FGD1P98174 961 aa21.3■■□□□ 1
COL1A1-206ENST00000485870 GHRHRQ02643 423 aa21.3■■□□□ 1
COL1A1-206ENST00000485870 TLE2Q04725 743 aa21.3■■□□□ 1
COL1A1-206ENST00000485870 PPP2R5BQ15173 497 aa21.3■■□□□ 1
COL1A1-206ENST00000485870 TMTC3Q6ZXV5 915 aa21.3■■□□□ 1
COL1A1-206ENST00000485870 SCFD2Q8WU76 684 aa21.3■■□□□ 1
COL1A1-206ENST00000485870 IWS1Q96ST2 819 aa21.3■■□□□ 1
COL1A1-206ENST00000485870 GDF15Q99988 308 aa21.3■■□□□ 1
COL1A1-206ENST00000485870 PXMP2Q9NR77 195 aa21.3■■□□□ 1
COL1A1-206ENST00000485870 PRKAG2Q9UGJ0 569 aa21.3■■□□□ 1
COL1A1-206ENST00000485870 BRPF3Q9ULD4 1205 aa21.3■■□□□ 1
COL1A1-206ENST00000485870 Q9Y3F1 56 aa21.3■■□□□ 1
COL1A1-206ENST00000485870 hCG_1642624A0A1W2PR95 340 aa21.29■■□□□ 1
COL1A1-206ENST00000485870 PQBP1O60828 265 aaKnown RBP21.29■■□□□ 1
COL1A1-206ENST00000485870 MDM2Q00987 491 aaPredicted RBP21.29■■□□□ 1
COL1A1-206ENST00000485870 BLOC1S2Q6QNY1 142 aa21.29■■□□□ 1
COL1A1-206ENST00000485870 MAP3K20Q9NYL2 800 aaKnown RBP21.29■■□□□ 1
COL1A1-206ENST00000485870 NAP1L2Q9ULW6 460 aaPredicted RBP21.29■■□□□ 1
COL1A1-206ENST00000485870 KLF18A0A0U1RQI7 1052 aa21.28■■□□□ 1
COL1A1-206ENST00000485870 ZBTB43O43298 467 aa21.28■■□□□ 1
COL1A1-206ENST00000485870 ZEB2O60315 1214 aa21.28■■□□□ 1
COL1A1-206ENST00000485870 NR3C2P08235 984 aa21.28■■□□□ 1
COL1A1-206ENST00000485870 STXBP2Q15833 593 aa21.28■■□□□ 1
COL1A1-206ENST00000485870 CXCL17Q6UXB2 119 aa21.28■■□□□ 1
COL1A1-206ENST00000485870 SEPT14Q6ZU15 432 aa21.28■■□□□ 1
COL1A1-206ENST00000485870 FCHSD1Q86WN1 690 aa21.28■■□□□ 1
COL1A1-206ENST00000485870 SAMD3Q8N6K7 520 aa21.28■■□□□ 1
COL1A1-206ENST00000485870 OR6J1Q8NGC5 347 aa21.28■■□□□ 1
COL1A1-206ENST00000485870 COPS5Q92905 334 aa21.28■■□□□ 1
COL1A1-206ENST00000485870 PDLIM7Q9NR12 457 aa21.28■■□□□ 1
COL1A1-206ENST00000485870 ELP1O95163 1332 aa21.28■■□□□ 1
COL1A1-206ENST00000485870 ARIH2O95376 493 aa21.27■■□□□ 1
COL1A1-206ENST00000485870 TXNP10599 105 aaKnown RBP21.27■■□□□ 1
COL1A1-206ENST00000485870 TTLL4Q14679 1199 aa21.27■■□□□ 1
COL1A1-206ENST00000485870 RTN1Q16799 776 aa21.27■■□□□ 1
COL1A1-206ENST00000485870 Q6ZUG5 572 aa21.27■■□□□ 1
COL1A1-206ENST00000485870 SH3RF1Q7Z6J0 888 aa21.27■■□□□ 1
COL1A1-206ENST00000485870 PDCD2LQ9BRP1 358 aa21.27■■□□□ 1
COL1A1-206ENST00000485870 RBM28Q9NW13 759 aaKnown RBP21.27■■□□□ 1
COL1A1-206ENST00000485870 KIAA1217Q5T5P2 1943 aa21.27■■□□□ 1
COL1A1-206ENST00000485870 A0A0U1RQG5 324 aaPredicted RBP21.26■□□□□ 0.99
COL1A1-206ENST00000485870 GOLGA8AA7E2F4 631 aa21.26■□□□□ 0.99
COL1A1-206ENST00000485870 GOLGA8BA8MQT2 603 aa21.26■□□□□ 0.99
COL1A1-206ENST00000485870 NKRFO15226 690 aaKnown RBP eCLIP21.26■□□□□ 0.99
COL1A1-206ENST00000485870 MYCLP12524 364 aaPredicted RBP21.26■□□□□ 0.99
COL1A1-206ENST00000485870 CASTP20810 708 aaKnown RBP21.26■□□□□ 0.99
COL1A1-206ENST00000485870 APOBRQ0VD83 1088 aa21.26■□□□□ 0.99
COL1A1-206ENST00000485870 LBHD1Q9BQE6 289 aaPredicted RBP21.26■□□□□ 0.99
COL1A1-206ENST00000485870 USP26Q9BXU7 913 aa21.26■□□□□ 0.99
COL1A1-206ENST00000485870 TRIM43BA6NCK2 446 aa21.25■□□□□ 0.99
COL1A1-206ENST00000485870 EPB41L2O43491 1005 aaKnown RBP21.25■□□□□ 0.99
COL1A1-206ENST00000485870 EIF3JO75822 258 aaKnown RBP21.25■□□□□ 0.99
COL1A1-206ENST00000485870 CLTBP09497 229 aa21.25■□□□□ 0.99
COL1A1-206ENST00000485870 RPS6KB1P23443 525 aa21.25■□□□□ 0.99
COL1A1-206ENST00000485870 PSMA5P28066 241 aa21.25■□□□□ 0.99
COL1A1-206ENST00000485870 CPT1AP50416 773 aa21.25■□□□□ 0.99
COL1A1-206ENST00000485870 PGM5Q15124 567 aa21.25■□□□□ 0.99
COL1A1-206ENST00000485870 IL31RAQ8NI17 732 aa21.25■□□□□ 0.99
COL1A1-206ENST00000485870 BRF1Q92994 677 aa21.25■□□□□ 0.99
COL1A1-206ENST00000485870 TRIM43Q96BQ3 446 aaPredicted RBP21.25■□□□□ 0.99
COL1A1-206ENST00000485870 UBE2OQ9C0C9 1292 aaKnown RBP21.25■□□□□ 0.99
COL1A1-206ENST00000485870 CNTNAP5Q8WYK1 1306 aa21.25■□□□□ 0.99
COL1A1-206ENST00000485870 LTBP2Q14767 1821 aa21.25■□□□□ 0.99
COL1A1-206ENST00000485870 DCDC2CA8MYV0 355 aa21.24■□□□□ 0.99
COL1A1-206ENST00000485870 ARVCFO00192 962 aa21.24■□□□□ 0.99
COL1A1-206ENST00000485870 CABYRO75952 493 aa21.24■□□□□ 0.99
COL1A1-206ENST00000485870 BMP8BP34820 402 aa21.24■□□□□ 0.99
COL1A1-206ENST00000485870 LY6KQ17RY6 165 aa21.24■□□□□ 0.99
COL1A1-206ENST00000485870 CCDC62Q6P9F0 684 aa21.24■□□□□ 0.99
COL1A1-206ENST00000485870 ANKRD33Q7Z3H0 272 aa21.24■□□□□ 0.99
COL1A1-206ENST00000485870 CUL5Q93034 780 aa21.24■□□□□ 0.99
COL1A1-206ENST00000485870 MYL3P08590 195 aa21.23■□□□□ 0.99
COL1A1-206ENST00000485870 CDK7P50613 346 aa21.23■□□□□ 0.99
COL1A1-206ENST00000485870 FXR1P51114 621 aaKnown RBP eCLIP21.23■□□□□ 0.99
COL1A1-206ENST00000485870 PSMC6P62333 389 aa21.23■□□□□ 0.99
COL1A1-206ENST00000485870 USP17L6PQ6QN14 398 aa21.23■□□□□ 0.99
COL1A1-206ENST00000485870 HEATR3Q7Z4Q2 680 aa21.23■□□□□ 0.99
COL1A1-206ENST00000485870 SMARCC2Q8TAQ2 1214 aa21.23■□□□□ 0.99
COL1A1-206ENST00000485870 GPKOWQ92917 476 aaPredicted RBP eCLIP21.23■□□□□ 0.99
COL1A1-206ENST00000485870 ZFP91Q96JP5 570 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms