RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 PAWRQ96IZ0 340 aaKnown RBP10.73□□□□□ -0.69
SHROOM3-207ENST00000485780 ZMYND12Q9H0C1 365 aa10.73□□□□□ -0.69
SHROOM3-207ENST00000485780 RNF216Q9NWF9 866 aaPredicted RBP10.73□□□□□ -0.69
SHROOM3-207ENST00000485780 NR2E3Q9Y5X4 410 aa10.73□□□□□ -0.69
SHROOM3-207ENST00000485780 MYH7BA7E2Y1 1941 aa10.73□□□□□ -0.69
SHROOM3-207ENST00000485780 H0YGN5 161 aa10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 K7ELQ4 463 aaPredicted RBP10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 MEIS2O14770 477 aa10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 EVI5O60447 810 aa10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 JAK2O60674 1132 aa10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 PGK2P07205 417 aa10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 EDNRBP24530 442 aa10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 CCND3P30281 292 aaPredicted RBP10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 CLK2P49760 499 aaKnown RBP10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 AKAP17AQ02040 695 aaKnown RBP10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 BAATQ14032 418 aaPredicted RBP10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 NPY5RQ15761 445 aa10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 NSMFQ6X4W1 530 aa10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 RNF207Q6ZRF8 634 aa10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 DAGLBQ8NCG7 672 aa10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 CCDC148Q8NFR7 591 aa10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 DNERQ8NFT8 737 aa10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 SYTL5Q8TDW5 730 aaPredicted RBP10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 CCDC12Q8WUD4 166 aaPredicted RBP10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 WASF1Q92558 559 aa10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 TBC1D5Q92609 795 aa10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 MAML3Q96JK9 1138 aa10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 GLT8D2Q9H1C3 349 aa10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 RIC8AQ9NPQ8 531 aa10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 COL20A1Q9P218 1284 aa10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 ORC3Q9UBD5 711 aaPredicted RBP10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 OGDHLQ9ULD0 1010 aa10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 SYNGAP1Q96PV0 1343 aa10.72□□□□□ -0.69
SHROOM3-207ENST00000485780 SOWAHBA6NEL2 793 aa10.71□□□□□ -0.69
SHROOM3-207ENST00000485780 POTEB2H3BUK9 544 aa10.71□□□□□ -0.69
SHROOM3-207ENST00000485780 PPFIA3O75145 1194 aa10.71□□□□□ -0.69
SHROOM3-207ENST00000485780 CYP2C19P33261 490 aa10.71□□□□□ -0.69
SHROOM3-207ENST00000485780 SLC4A3P48751 1232 aa10.71□□□□□ -0.69
SHROOM3-207ENST00000485780 NAPAP54920 295 aa10.71□□□□□ -0.69
SHROOM3-207ENST00000485780 CNTN2Q02246 1040 aa10.71□□□□□ -0.69
SHROOM3-207ENST00000485780 DIS3LQ8TF46 1054 aaKnown RBP10.71□□□□□ -0.69
SHROOM3-207ENST00000485780 CUL5Q93034 780 aa10.71□□□□□ -0.69
SHROOM3-207ENST00000485780 DDX11Q96FC9 970 aa10.71□□□□□ -0.69
SHROOM3-207ENST00000485780 INTS4Q96HW7 963 aaKnown RBP10.71□□□□□ -0.69
SHROOM3-207ENST00000485780 AIFM3Q96NN9 605 aa10.71□□□□□ -0.69
SHROOM3-207ENST00000485780 PHF20Q9BVI0 1012 aa10.71□□□□□ -0.69
SHROOM3-207ENST00000485780 C11orf49Q9H6J7 331 aa10.71□□□□□ -0.69
SHROOM3-207ENST00000485780 PSTPIP2Q9H939 334 aa10.71□□□□□ -0.69
SHROOM3-207ENST00000485780 FLRT1Q9NZU1 646 aa10.71□□□□□ -0.69
SHROOM3-207ENST00000485780 VPS54Q9P1Q0 977 aa10.71□□□□□ -0.69
SHROOM3-207ENST00000485780 GCOM1H8Y6P7 765 aaPredicted RBP10.7□□□□□ -0.7
SHROOM3-207ENST00000485780 M0R2N6 131 aa10.7□□□□□ -0.7
SHROOM3-207ENST00000485780 MSCO60682 206 aa10.7□□□□□ -0.7
SHROOM3-207ENST00000485780 CFBP00751 764 aa10.7□□□□□ -0.7
SHROOM3-207ENST00000485780 POLR2MP0CAP2 368 aa10.7□□□□□ -0.7
SHROOM3-207ENST00000485780 ALDH5A1P51649 535 aaPredicted RBP10.7□□□□□ -0.7
SHROOM3-207ENST00000485780 ADCY7P51828 1080 aa10.7□□□□□ -0.7
SHROOM3-207ENST00000485780 AP3B2Q13367 1082 aa10.7□□□□□ -0.7
SHROOM3-207ENST00000485780 GALNT17Q6IS24 598 aa10.7□□□□□ -0.7
SHROOM3-207ENST00000485780 ALG1Q9BT22 464 aa10.7□□□□□ -0.7
SHROOM3-207ENST00000485780 ADD3Q9UEY8 706 aaKnown RBP10.7□□□□□ -0.7
SHROOM3-207ENST00000485780 DDX20Q9UHI6 824 aaKnown RBP10.7□□□□□ -0.7
SHROOM3-207ENST00000485780 NRBP1Q9UHY1 535 aa10.7□□□□□ -0.7
SHROOM3-207ENST00000485780 SMCO2A6NFE2 343 aa10.69□□□□□ -0.7
SHROOM3-207ENST00000485780 ASB14A6NK59 587 aa10.69□□□□□ -0.7
SHROOM3-207ENST00000485780 CALML3P27482 149 aa10.69□□□□□ -0.7
SHROOM3-207ENST00000485780 GNA11P29992 359 aa10.69□□□□□ -0.7
SHROOM3-207ENST00000485780 HOXA13P31271 388 aaPredicted RBP10.69□□□□□ -0.7
SHROOM3-207ENST00000485780 MRPL12P52815 198 aaKnown RBP10.69□□□□□ -0.7
SHROOM3-207ENST00000485780 HABP4Q5JVS0 413 aaKnown RBP10.69□□□□□ -0.7
SHROOM3-207ENST00000485780 USP17L6PQ6QN14 398 aa10.69□□□□□ -0.7
SHROOM3-207ENST00000485780 PPP4R3CPQ6ZMV5 832 aa10.69□□□□□ -0.7
SHROOM3-207ENST00000485780 HSCBQ8IWL3 235 aa10.69□□□□□ -0.7
SHROOM3-207ENST00000485780 NSUN6Q8TEA1 469 aaKnown RBP10.69□□□□□ -0.7
SHROOM3-207ENST00000485780 CRYGNQ8WXF5 182 aa10.69□□□□□ -0.7
SHROOM3-207ENST00000485780 PURBQ96QR8 312 aaKnown RBP10.69□□□□□ -0.7
SHROOM3-207ENST00000485780 PDCD2LQ9BRP1 358 aa10.69□□□□□ -0.7
SHROOM3-207ENST00000485780 TINF2Q9BSI4 451 aa10.69□□□□□ -0.7
SHROOM3-207ENST00000485780 KATNBL1Q9H079 304 aa10.69□□□□□ -0.7
SHROOM3-207ENST00000485780 C6orf50Q9HD87 102 aa10.69□□□□□ -0.7
SHROOM3-207ENST00000485780 TSHZ2Q9NRE2 1034 aa10.69□□□□□ -0.7
SHROOM3-207ENST00000485780 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.69□□□□□ -0.7
SHROOM3-207ENST00000485780 ADAMTS3O15072 1205 aa10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 DTNBO60941 627 aa10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 SLC34A2O95436 690 aa10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 SNAI1O95863 264 aaPredicted RBP10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 FOSP01100 380 aaPredicted RBP10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 MMP1P03956 469 aa10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 CYBAP13498 195 aa10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 XBP1P17861 261 aa10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 UBE2SQ16763 222 aa10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 LHX8Q68G74 356 aa10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 MCTP2Q6DN12 878 aa10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 CHRDL2Q6WN34 429 aa10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 ARMCX2Q7L311 632 aa10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 C7orf61Q8IZ16 206 aa10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 REXO1Q8N1G1 1221 aaKnown RBP10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 BICD2Q8TD16 824 aa10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 TNFRSF25Q93038 417 aa10.68□□□□□ -0.7
SHROOM3-207ENST00000485780 TAAR1Q96RJ0 339 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms