RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	FDX1	P10109	184 aa		12.47	□□□□□ -0.41
HMGN1-215	ENST00000485550	ATP2A2	P16615	1042 aa	Known RBP	12.47	□□□□□ -0.41
HMGN1-215	ENST00000485550	ITGA7	Q13683	1181 aa		12.47	□□□□□ -0.41
HMGN1-215	ENST00000485550	MUM1L1	Q5H9M0	696 aa		12.47	□□□□□ -0.41
HMGN1-215	ENST00000485550	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.47	□□□□□ -0.41
HMGN1-215	ENST00000485550	CHD1L	Q86WJ1	897 aa		12.47	□□□□□ -0.41
HMGN1-215	ENST00000485550	SMC5	Q8IY18	1101 aa		12.47	□□□□□ -0.41
HMGN1-215	ENST00000485550	VWCE	Q96DN2	955 aa		12.47	□□□□□ -0.41
HMGN1-215	ENST00000485550	TMEM47	Q9BQJ4	181 aa		12.47	□□□□□ -0.41
HMGN1-215	ENST00000485550	GPCPD1	Q9NPB8	672 aa		12.47	□□□□□ -0.41
HMGN1-215	ENST00000485550	A1CF	Q9NQ94	594 aa	Known RBP	12.47	□□□□□ -0.41
HMGN1-215	ENST00000485550	GRIN2D	O15399	1336 aa		12.46	□□□□□ -0.41
HMGN1-215	ENST00000485550	FRMPD2	Q68DX3	1309 aa	Predicted RBP	12.46	□□□□□ -0.41
HMGN1-215	ENST00000485550	SEC24B	O95487	1268 aa		12.46	□□□□□ -0.41
HMGN1-215	ENST00000485550	FGR	P09769	529 aa		12.46	□□□□□ -0.41
HMGN1-215	ENST00000485550	SDS	P20132	328 aa		12.46	□□□□□ -0.41
HMGN1-215	ENST00000485550	PSMC6	P62333	389 aa		12.46	□□□□□ -0.41
HMGN1-215	ENST00000485550	TTLL4	Q14679	1199 aa		12.46	□□□□□ -0.41
HMGN1-215	ENST00000485550	TMEM67	Q5HYA8	995 aa		12.46	□□□□□ -0.41
HMGN1-215	ENST00000485550	POTEG	Q6S5H5	508 aa		12.46	□□□□□ -0.41
HMGN1-215	ENST00000485550	NSMF	Q6X4W1	530 aa		12.46	□□□□□ -0.41
HMGN1-215	ENST00000485550	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.46	□□□□□ -0.41
HMGN1-215	ENST00000485550	EEPD1	Q7L9B9	569 aa		12.46	□□□□□ -0.41
HMGN1-215	ENST00000485550	DEFB128	Q7Z7B8	93 aa		12.46	□□□□□ -0.41
HMGN1-215	ENST00000485550	PLEKHM2	Q8IWE5	1019 aa		12.46	□□□□□ -0.41
HMGN1-215	ENST00000485550	RPUSD2	Q8IZ73	545 aa	Known RBP	12.46	□□□□□ -0.41
HMGN1-215	ENST00000485550	FAM133A	Q8N9E0	248 aa		12.46	□□□□□ -0.41
HMGN1-215	ENST00000485550	SLC43A3	Q8NBI5	491 aa		12.46	□□□□□ -0.41
HMGN1-215	ENST00000485550	PURB	Q96QR8	312 aa	Known RBP	12.46	□□□□□ -0.41
HMGN1-215	ENST00000485550	KATNBL1	Q9H079	304 aa		12.46	□□□□□ -0.41
HMGN1-215	ENST00000485550	CCPG1	Q9ULG6	757 aa		12.46	□□□□□ -0.41
HMGN1-215	ENST00000485550	CCDC171	Q6TFL3	1326 aa		12.45	□□□□□ -0.42
HMGN1-215	ENST00000485550	PLA2G6	O60733	806 aa		12.45	□□□□□ -0.42
HMGN1-215	ENST00000485550	GPR37L1	O60883	481 aa		12.45	□□□□□ -0.42
HMGN1-215	ENST00000485550	ARHGEF15	O94989	841 aa		12.45	□□□□□ -0.42
HMGN1-215	ENST00000485550	TOP1	P11387	765 aa	Known RBP	12.45	□□□□□ -0.42
HMGN1-215	ENST00000485550	POU3F3	P20264	500 aa	Predicted RBP	12.45	□□□□□ -0.42
HMGN1-215	ENST00000485550	TNFAIP2	Q03169	654 aa		12.45	□□□□□ -0.42
HMGN1-215	ENST00000485550	TKFC	Q3LXA3	575 aa		12.45	□□□□□ -0.42
HMGN1-215	ENST00000485550	MFSD6	Q6ZSS7	791 aa		12.45	□□□□□ -0.42
HMGN1-215	ENST00000485550	TLK2	Q86UE8	772 aa		12.45	□□□□□ -0.42
HMGN1-215	ENST00000485550	TBC1D10C	Q8IV04	446 aa		12.45	□□□□□ -0.42
HMGN1-215	ENST00000485550	DCAF4	Q8WV16	495 aa		12.45	□□□□□ -0.42
HMGN1-215	ENST00000485550	ARNTL2	Q8WYA1	636 aa		12.45	□□□□□ -0.42
HMGN1-215	ENST00000485550	COG5	Q9UP83	839 aa		12.45	□□□□□ -0.42
HMGN1-215	ENST00000485550	SCN10A	Q9Y5Y9	1956 aa		12.44	□□□□□ -0.42
HMGN1-215	ENST00000485550	CABYR	O75952	493 aa		12.44	□□□□□ -0.42
HMGN1-215	ENST00000485550	NOV	P48745	357 aa		12.44	□□□□□ -0.42
HMGN1-215	ENST00000485550	NUCB1	Q02818	461 aa		12.44	□□□□□ -0.42
HMGN1-215	ENST00000485550	FSCN1	Q16658	493 aa	Known RBP	12.44	□□□□□ -0.42
HMGN1-215	ENST00000485550	TMEM63B	Q5T3F8	832 aa		12.44	□□□□□ -0.42
HMGN1-215	ENST00000485550	SYDE2	Q5VT97	1194 aa		12.44	□□□□□ -0.42
HMGN1-215	ENST00000485550	CWC27	Q6UX04	472 aa	Known RBP	12.44	□□□□□ -0.42
HMGN1-215	ENST00000485550	HLA-C	Q95604	372 aa		12.44	□□□□□ -0.42
HMGN1-215	ENST00000485550	ZKSCAN3	Q9BRR0	538 aa		12.44	□□□□□ -0.42
HMGN1-215	ENST00000485550	CD320	Q9NPF0	282 aa		12.44	□□□□□ -0.42
HMGN1-215	ENST00000485550	PDGFC	Q9NRA1	345 aa		12.44	□□□□□ -0.42
HMGN1-215	ENST00000485550	GNE	Q9Y223	722 aa	Known RBP	12.44	□□□□□ -0.42
HMGN1-215	ENST00000485550	SI	P14410	1827 aa		12.44	□□□□□ -0.42
HMGN1-215	ENST00000485550	ASB14	A6NK59	587 aa		12.43	□□□□□ -0.42
HMGN1-215	ENST00000485550	DYNC1LI2	O43237	492 aa	Predicted RBP	12.43	□□□□□ -0.42
HMGN1-215	ENST00000485550	ICAM1	P05362	532 aa		12.43	□□□□□ -0.42
HMGN1-215	ENST00000485550	CYP2C9	P11712	490 aa		12.43	□□□□□ -0.42
HMGN1-215	ENST00000485550	NKX3-2	P78367	333 aa		12.43	□□□□□ -0.42
HMGN1-215	ENST00000485550	AAMP	Q13685	434 aa		12.43	□□□□□ -0.42
HMGN1-215	ENST00000485550	BAAT	Q14032	418 aa	Predicted RBP	12.43	□□□□□ -0.42
HMGN1-215	ENST00000485550	SPRED2	Q7Z698	418 aa		12.43	□□□□□ -0.42
HMGN1-215	ENST00000485550	FBXO16	Q8IX29	292 aa	Predicted RBP	12.43	□□□□□ -0.42
HMGN1-215	ENST00000485550	AP5M1	Q9H0R1	490 aa		12.43	□□□□□ -0.42
HMGN1-215	ENST00000485550	RANBP17	Q9H2T7	1088 aa	Known RBP	12.43	□□□□□ -0.42
HMGN1-215	ENST00000485550	TCP11L1	Q9NUJ3	509 aa		12.43	□□□□□ -0.42
HMGN1-215	ENST00000485550	CYP39A1	Q9NYL5	469 aa		12.43	□□□□□ -0.42
HMGN1-215	ENST00000485550	NFIB	O00712	420 aa		12.42	□□□□□ -0.42
HMGN1-215	ENST00000485550	ZNF213	O14771	459 aa		12.42	□□□□□ -0.42
HMGN1-215	ENST00000485550	GOLGA8H	P0CJ92	632 aa		12.42	□□□□□ -0.42
HMGN1-215	ENST00000485550	PDHB	P11177	359 aa		12.42	□□□□□ -0.42
HMGN1-215	ENST00000485550	PYGB	P11216	843 aa		12.42	□□□□□ -0.42
HMGN1-215	ENST00000485550	SMPD1	P17405	629 aa		12.42	□□□□□ -0.42
HMGN1-215	ENST00000485550	MFAP1	P55081	439 aa	Known RBP	12.42	□□□□□ -0.42
HMGN1-215	ENST00000485550	TAP1	Q03518	808 aa		12.42	□□□□□ -0.42
HMGN1-215	ENST00000485550	GRB10	Q13322	594 aa		12.42	□□□□□ -0.42
HMGN1-215	ENST00000485550	BTNL9	Q6UXG8	535 aa		12.42	□□□□□ -0.42
HMGN1-215	ENST00000485550	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	12.42	□□□□□ -0.42
HMGN1-215	ENST00000485550	CPVL	Q9H3G5	476 aa		12.42	□□□□□ -0.42
HMGN1-215	ENST00000485550	OSBPL3	Q9H4L5	887 aa		12.42	□□□□□ -0.42
HMGN1-215	ENST00000485550	DIAPH3	Q9NSV4	1193 aa		12.42	□□□□□ -0.42
HMGN1-215	ENST00000485550	TRMT13	Q9NUP7	481 aa	Known RBP	12.42	□□□□□ -0.42
HMGN1-215	ENST00000485550	NEDD4	P46934	1319 aa		12.41	□□□□□ -0.42
HMGN1-215	ENST00000485550	PTPDC1	A2A3K4	754 aa		12.41	□□□□□ -0.42
HMGN1-215	ENST00000485550	PI4K2B	G5E9Z4	385 aa		12.41	□□□□□ -0.42
HMGN1-215	ENST00000485550	ZEB2	O60315	1214 aa		12.41	□□□□□ -0.42
HMGN1-215	ENST00000485550	IER5L	Q5T953	404 aa		12.41	□□□□□ -0.42
HMGN1-215	ENST00000485550	LCE2D	Q5TA82	110 aa	Predicted RBP	12.41	□□□□□ -0.42
HMGN1-215	ENST00000485550	TAPT1	Q6NXT6	567 aa		12.41	□□□□□ -0.42
HMGN1-215	ENST00000485550	KIAA1211	Q6ZU35	1233 aa		12.41	□□□□□ -0.42
HMGN1-215	ENST00000485550	TICAM2	Q86XR7	235 aa		12.41	□□□□□ -0.42
HMGN1-215	ENST00000485550	PPP1R13L	Q8WUF5	828 aa		12.41	□□□□□ -0.42
HMGN1-215	ENST00000485550	ESR2	Q92731	530 aa		12.41	□□□□□ -0.42
HMGN1-215	ENST00000485550	TTC14	Q96N46	770 aa		12.41	□□□□□ -0.42
HMGN1-215	ENST00000485550	SLC9A7	Q96T83	725 aa		12.41	□□□□□ -0.42

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