RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 RPTORQ8N122 1335 aa20.06■□□□□ 0.8
CHMP3-207ENST00000485465 SOWAHBA6NEL2 793 aa20.06■□□□□ 0.8
CHMP3-207ENST00000485465 MAP2K5Q13163 448 aa20.06■□□□□ 0.8
CHMP3-207ENST00000485465 ZNF792Q3KQV3 632 aa20.06■□□□□ 0.8
CHMP3-207ENST00000485465 ARHGEF16Q5VV41 709 aa20.06■□□□□ 0.8
CHMP3-207ENST00000485465 DPP9Q86TI2 863 aa20.06■□□□□ 0.8
CHMP3-207ENST00000485465 NSUN6Q8TEA1 469 aaKnown RBP20.06■□□□□ 0.8
CHMP3-207ENST00000485465 TBCKQ8TEA7 893 aa20.06■□□□□ 0.8
CHMP3-207ENST00000485465 USP6NLQ92738 828 aa20.06■□□□□ 0.8
CHMP3-207ENST00000485465 ERO1AQ96HE7 468 aa20.06■□□□□ 0.8
CHMP3-207ENST00000485465 NUDT12Q9BQG2 462 aa20.06■□□□□ 0.8
CHMP3-207ENST00000485465 PXMP2Q9NR77 195 aa20.06■□□□□ 0.8
CHMP3-207ENST00000485465 GJD2Q9UKL4 321 aa20.06■□□□□ 0.8
CHMP3-207ENST00000485465 PLXNB2O15031 1838 aa20.06■□□□□ 0.8
CHMP3-207ENST00000485465 FRMPD4Q14CM0 1322 aa20.05■□□□□ 0.8
CHMP3-207ENST00000485465 SREBF1P36956 1147 aa20.05■□□□□ 0.8
CHMP3-207ENST00000485465 CAP1Q01518 475 aa20.05■□□□□ 0.8
CHMP3-207ENST00000485465 INF2Q27J81 1249 aa20.05■□□□□ 0.8
CHMP3-207ENST00000485465 SOCS4Q8WXH5 440 aa20.05■□□□□ 0.8
CHMP3-207ENST00000485465 FGD4Q96M96 766 aa20.05■□□□□ 0.8
CHMP3-207ENST00000485465 ADD3Q9UEY8 706 aaKnown RBP20.05■□□□□ 0.8
CHMP3-207ENST00000485465 ASTN1O14525 1302 aa20.04■□□□□ 0.8
CHMP3-207ENST00000485465 ZNF236Q9UL36 1845 aa20.04■□□□□ 0.8
CHMP3-207ENST00000485465 EIF2AK2P19525 551 aaKnown RBP20.04■□□□□ 0.8
CHMP3-207ENST00000485465 ALDH5A1P51649 535 aaPredicted RBP20.04■□□□□ 0.8
CHMP3-207ENST00000485465 UBXN2AP68543 259 aa20.04■□□□□ 0.8
CHMP3-207ENST00000485465 ARHGAP4P98171 946 aa20.04■□□□□ 0.8
CHMP3-207ENST00000485465 CRYGNQ8WXF5 182 aa20.04■□□□□ 0.8
CHMP3-207ENST00000485465 PDCD2LQ9BRP1 358 aa20.04■□□□□ 0.8
CHMP3-207ENST00000485465 SLC5A4Q9NY91 659 aa20.04■□□□□ 0.8
CHMP3-207ENST00000485465 NOL7Q9UMY1 257 aaKnown RBP20.04■□□□□ 0.8
CHMP3-207ENST00000485465 DIS3Q9Y2L1 958 aaKnown RBP20.04■□□□□ 0.8
CHMP3-207ENST00000485465 EDIL3O43854 480 aa20.03■□□□□ 0.8
CHMP3-207ENST00000485465 CYP3A4P08684 503 aa20.03■□□□□ 0.8
CHMP3-207ENST00000485465 HOXC6P09630 235 aa20.03■□□□□ 0.8
CHMP3-207ENST00000485465 RGS2P41220 211 aa20.03■□□□□ 0.8
CHMP3-207ENST00000485465 USP11P51784 963 aa20.03■□□□□ 0.8
CHMP3-207ENST00000485465 ARHGEF6Q15052 776 aa20.03■□□□□ 0.8
CHMP3-207ENST00000485465 PGM5Q15124 567 aa20.03■□□□□ 0.8
CHMP3-207ENST00000485465 MYSM1Q5VVJ2 828 aa20.03■□□□□ 0.8
CHMP3-207ENST00000485465 FAM173BQ6P4H8 233 aa20.03■□□□□ 0.8
CHMP3-207ENST00000485465 NEK8Q86SG6 692 aa20.03■□□□□ 0.8
CHMP3-207ENST00000485465 NPLOC4Q8TAT6 608 aa20.03■□□□□ 0.8
CHMP3-207ENST00000485465 IWS1Q96ST2 819 aa20.03■□□□□ 0.8
CHMP3-207ENST00000485465 MGAMO43451 1857 aa20.03■□□□□ 0.8
CHMP3-207ENST00000485465 LCTP09848 1927 aa20.02■□□□□ 0.8
CHMP3-207ENST00000485465 LOC102724159A0A0B4J2E5 919 aa20.02■□□□□ 0.8
CHMP3-207ENST00000485465 GNRH1P01148 92 aa20.02■□□□□ 0.8
CHMP3-207ENST00000485465 NR3C2P08235 984 aa20.02■□□□□ 0.8
CHMP3-207ENST00000485465 HOXD10P28358 340 aa20.02■□□□□ 0.8
CHMP3-207ENST00000485465 TRAPPC10P48553 1259 aa20.02■□□□□ 0.8
CHMP3-207ENST00000485465 TOB1P50616 345 aaPredicted RBP20.02■□□□□ 0.8
CHMP3-207ENST00000485465 PWP2Q15269 919 aaKnown RBP20.02■□□□□ 0.8
CHMP3-207ENST00000485465 RILPL1Q5EBL4 403 aa20.02■□□□□ 0.8
CHMP3-207ENST00000485465 PCNX4Q63HM2 1172 aa20.02■□□□□ 0.8
CHMP3-207ENST00000485465 XRRA1Q6P2D8 792 aa20.02■□□□□ 0.8
CHMP3-207ENST00000485465 ZNF467Q7Z7K2 595 aaPredicted RBP20.02■□□□□ 0.8
CHMP3-207ENST00000485465 IL31RAQ8NI17 732 aa20.02■□□□□ 0.8
CHMP3-207ENST00000485465 GABRQQ9UN88 632 aa20.02■□□□□ 0.8
CHMP3-207ENST00000485465 CEP350Q5VT06 3117 aa20.02■□□□□ 0.79
CHMP3-207ENST00000485465 ZSWIM8A7E2V4 1837 aa20.02■□□□□ 0.79
CHMP3-207ENST00000485465 B4DLN1 442 aa20.01■□□□□ 0.79
CHMP3-207ENST00000485465 ATP2B1P20020 1258 aa20.01■□□□□ 0.79
CHMP3-207ENST00000485465 CYP2B6P20813 491 aa20.01■□□□□ 0.79
CHMP3-207ENST00000485465 EDNRBP24530 442 aa20.01■□□□□ 0.79
CHMP3-207ENST00000485465 CCND2P30279 289 aa20.01■□□□□ 0.79
CHMP3-207ENST00000485465 PRKCZQ05513 592 aa20.01■□□□□ 0.79
CHMP3-207ENST00000485465 LETM2Q2VYF4 491 aa20.01■□□□□ 0.79
CHMP3-207ENST00000485465 VSIG10LQ86VR7 867 aa20.01■□□□□ 0.79
CHMP3-207ENST00000485465 MAML3Q96JK9 1138 aa20.01■□□□□ 0.79
CHMP3-207ENST00000485465 MPHOSPH6Q99547 160 aaKnown RBP20.01■□□□□ 0.79
CHMP3-207ENST00000485465 APBA2Q99767 749 aa20.01■□□□□ 0.79
CHMP3-207ENST00000485465 ATP6V1DQ9Y5K8 247 aa20.01■□□□□ 0.79
CHMP3-207ENST00000485465 ZNFX1Q9P2E3 1918 aaKnown RBP20.01■□□□□ 0.79
CHMP3-207ENST00000485465 ASB14A6NK59 587 aa20■□□□□ 0.79
CHMP3-207ENST00000485465 MYCLP12524 364 aaPredicted RBP20■□□□□ 0.79
CHMP3-207ENST00000485465 FLT3LGP49771 235 aa20■□□□□ 0.79
CHMP3-207ENST00000485465 FOXD4L6Q3SYB3 417 aaPredicted RBP20■□□□□ 0.79
CHMP3-207ENST00000485465 TTC38Q5R3I4 469 aa20■□□□□ 0.79
CHMP3-207ENST00000485465 FOXD4L3Q6VB84 417 aaPredicted RBP20■□□□□ 0.79
CHMP3-207ENST00000485465 MORC4Q8TE76 937 aa20■□□□□ 0.79
CHMP3-207ENST00000485465 SRRDQ9UH36 339 aa20■□□□□ 0.79
CHMP3-207ENST00000485465 DDX49Q9Y6V7 483 aaKnown RBP20■□□□□ 0.79
CHMP3-207ENST00000485465 CYP3A7-CYP3A51PA0A087WV96 503 aa19.99■□□□□ 0.79
CHMP3-207ENST00000485465 WNT7AO00755 349 aa19.99■□□□□ 0.79
CHMP3-207ENST00000485465 FOXN1O15353 648 aa19.99■□□□□ 0.79
CHMP3-207ENST00000485465 CCNT1O60563 726 aaKnown RBP19.99■□□□□ 0.79
CHMP3-207ENST00000485465 HSPA1AP0DMV8 641 aaKnown RBP19.99■□□□□ 0.79
CHMP3-207ENST00000485465 HSPA1BP0DMV9 641 aaKnown RBP19.99■□□□□ 0.79
CHMP3-207ENST00000485465 HSPA8P11142 646 aaKnown RBP19.99■□□□□ 0.79
CHMP3-207ENST00000485465 XRCC5P13010 732 aaKnown RBP19.99■□□□□ 0.79
CHMP3-207ENST00000485465 CYP3A7P24462 503 aa19.99■□□□□ 0.79
CHMP3-207ENST00000485465 CIITAP33076 1130 aa19.99■□□□□ 0.79
CHMP3-207ENST00000485465 ZNF76P36508 570 aa19.99■□□□□ 0.79
CHMP3-207ENST00000485465 MRPS9P82933 396 aaKnown RBP19.99■□□□□ 0.79
CHMP3-207ENST00000485465 PDE4DQ08499 809 aa19.99■□□□□ 0.79
CHMP3-207ENST00000485465 NBR1Q14596 966 aa19.99■□□□□ 0.79
CHMP3-207ENST00000485465 STXBP2Q15833 593 aa19.99■□□□□ 0.79
CHMP3-207ENST00000485465 PPP4R3AQ6IN85 833 aa19.99■□□□□ 0.79
CHMP3-207ENST00000485465 MAMDC4Q6UXC1 1216 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms