RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 SPECC1Q5M775 1068 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 SYT10Q6XYQ8 523 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 MMS22LQ6ZRQ5 1243 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 ANKS1AQ92625 1134 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 TNFRSF25Q93038 417 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 SH3GLB2Q9NR46 395 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 GINM1Q9NU53 330 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 FANCLQ9NW38 375 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 HOXC10Q9NYD6 342 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 TSPY2A6NKD2 308 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 USP27XA6NNY8 438 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 SERPINB2P05120 415 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 USP17L8P0C7I0 530 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 SCG2P13521 617 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 BMP6P22004 513 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 CALML3P27482 149 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 GRIN1Q05586 938 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 GRAPQ13588 217 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 PFKFB3Q16875 520 aaPredicted RBP10.28□□□□□ -0.76
USP16-206ENST00000485067 PACS2Q86VP3 889 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 FCHSD1Q86WN1 690 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 DGKHQ86XP1 1220 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 LMNTD2Q8IXW0 634 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 TEX11Q8IYF3 940 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 GRAPLQ8TC17 118 aaPredicted RBP10.28□□□□□ -0.76
USP16-206ENST00000485067 FAM81BQ96LP2 452 aa10.28□□□□□ -0.76
USP16-206ENST00000485067 NAV1Q8NEY1 1877 aa10.27□□□□□ -0.76
USP16-206ENST00000485067 ROBO3Q96MS0 1386 aa10.27□□□□□ -0.76
USP16-206ENST00000485067 BAG3O95817 575 aa10.27□□□□□ -0.76
USP16-206ENST00000485067 TOP1P11387 765 aaKnown RBP10.27□□□□□ -0.76
USP16-206ENST00000485067 HOXD10P28358 340 aa10.27□□□□□ -0.76
USP16-206ENST00000485067 SMARCA1P28370 1054 aa10.27□□□□□ -0.76
USP16-206ENST00000485067 MAGEA9P43362 315 aa10.27□□□□□ -0.76
USP16-206ENST00000485067 GNAQP50148 359 aa10.27□□□□□ -0.76
USP16-206ENST00000485067 PLCD1P51178 756 aa10.27□□□□□ -0.76
USP16-206ENST00000485067 DBN1Q16643 649 aa10.27□□□□□ -0.76
USP16-206ENST00000485067 TTC38Q5R3I4 469 aa10.27□□□□□ -0.76
USP16-206ENST00000485067 C15orf52Q6ZUT6 534 aaKnown RBP10.27□□□□□ -0.76
USP16-206ENST00000485067 SRBD1Q8N5C6 995 aaKnown RBP10.27□□□□□ -0.76
USP16-206ENST00000485067 MUC3BQ9H195 1237 aa10.27□□□□□ -0.76
USP16-206ENST00000485067 PICK1Q9NRD5 415 aa10.27□□□□□ -0.76
USP16-206ENST00000485067 FAM205CA6NFA0 338 aa10.27□□□□□ -0.77
USP16-206ENST00000485067 FOXN1O15353 648 aa10.27□□□□□ -0.77
USP16-206ENST00000485067 LDHBP07195 334 aaKnown RBP10.27□□□□□ -0.77
USP16-206ENST00000485067 LDHCP07864 332 aa10.27□□□□□ -0.77
USP16-206ENST00000485067 VEGFAP15692 232 aaPredicted RBP10.27□□□□□ -0.77
USP16-206ENST00000485067 ZNF18P17022 549 aa10.27□□□□□ -0.77
USP16-206ENST00000485067 ATP2C1P98194 919 aaPredicted RBP10.27□□□□□ -0.77
USP16-206ENST00000485067 MAP2K5Q13163 448 aa10.27□□□□□ -0.77
USP16-206ENST00000485067 ZNF827Q17R98 1081 aa10.27□□□□□ -0.77
USP16-206ENST00000485067 E4F1Q66K89 784 aaPredicted RBP10.27□□□□□ -0.77
USP16-206ENST00000485067 SH3RF1Q7Z6J0 888 aa10.27□□□□□ -0.77
USP16-206ENST00000485067 TXLNBQ8N3L3 684 aa10.27□□□□□ -0.77
USP16-206ENST00000485067 DYNLL2Q96FJ2 89 aa10.27□□□□□ -0.77
USP16-206ENST00000485067 MPP4Q96JB8 637 aa10.27□□□□□ -0.77
USP16-206ENST00000485067 GSDMAQ96QA5 445 aa10.27□□□□□ -0.77
USP16-206ENST00000485067 KAT14Q9H8E8 782 aa10.27□□□□□ -0.77
USP16-206ENST00000485067 TCP11L1Q9NUJ3 509 aa10.27□□□□□ -0.77
USP16-206ENST00000485067 BARX2Q9UMQ3 279 aaPredicted RBP10.27□□□□□ -0.77
USP16-206ENST00000485067 XDHP47989 1333 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 ADAMTS3O15072 1205 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 NSUN2Q08J23 767 aaKnown RBP eCLIP10.26□□□□□ -0.77
USP16-206ENST00000485067 SFSWAPQ12872 951 aaKnown RBP10.26□□□□□ -0.77
USP16-206ENST00000485067 NPY5RQ15761 445 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 C12orf60Q5U649 245 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 KRT27Q7Z3Y8 459 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 ZNF804AQ7Z570 1209 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 FBXO22Q8NEZ5 403 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 SH3RF3Q8TEJ3 882 aaPredicted RBP10.26□□□□□ -0.77
USP16-206ENST00000485067 TSC1Q92574 1164 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 PPP1R13BQ96KQ4 1090 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 ZNF287Q9HBT7 754 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 TRMT1Q9NXH9 659 aaKnown RBP10.26□□□□□ -0.77
USP16-206ENST00000485067 MCM9Q9NXL9 1143 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 MKRN1Q9UHC7 482 aaKnown RBP10.26□□□□□ -0.77
USP16-206ENST00000485067 NFE2L3Q9Y4A8 694 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 AP1G2O75843 785 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 MYCLP1P12525 358 aaPredicted RBP10.26□□□□□ -0.77
USP16-206ENST00000485067 USP5P45974 858 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 MNX1P50219 401 aaPredicted RBP10.26□□□□□ -0.77
USP16-206ENST00000485067 NLRP5P59047 1200 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 DEUP1Q05D60 604 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 CAMK2BQ13554 666 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 ARMC3Q5W041 872 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 ARL6IP4Q66PJ3 421 aaKnown RBP10.26□□□□□ -0.77
USP16-206ENST00000485067 GALNT17Q6IS24 598 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 SRLQ86TD4 932 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 TMEM110Q86TL2 294 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 SLF2Q8IX21 1173 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 SLC44A5Q8NCS7 719 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 DPF2Q92785 391 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 SYMPKQ92797 1274 aaKnown RBP10.26□□□□□ -0.77
USP16-206ENST00000485067 DHX58Q96C10 678 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 PAGE5Q96GU1 130 aa10.26□□□□□ -0.77
USP16-206ENST00000485067 TRIM6Q9C030 488 aaPredicted RBP10.26□□□□□ -0.77
USP16-206ENST00000485067 POLRMTO00411 1230 aaKnown RBP10.25□□□□□ -0.77
USP16-206ENST00000485067 ZSCAN12O43309 604 aa10.25□□□□□ -0.77
USP16-206ENST00000485067 MTA2O94776 668 aa10.25□□□□□ -0.77
USP16-206ENST00000485067 UFL1O94874 794 aa10.25□□□□□ -0.77
USP16-206ENST00000485067 MYL1P05976 194 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms