RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 OPTNQ96CV9 577 aa6.15□□□□□ -1.42
CCDC39-205ENST00000485055 TRMT2BQ96GJ1 504 aaKnown RBP6.15□□□□□ -1.42
CCDC39-205ENST00000485055 ZFYVE28Q9HCC9 887 aa6.15□□□□□ -1.42
CCDC39-205ENST00000485055 MORF4L1Q9UBU8 362 aa6.15□□□□□ -1.42
CCDC39-205ENST00000485055 GTF2A1LQ9UNN4 478 aa6.15□□□□□ -1.42
CCDC39-205ENST00000485055 PCDHGB3Q9Y5G1 929 aa6.15□□□□□ -1.42
CCDC39-205ENST00000485055 PCDHAC2Q9Y5I4 1007 aa6.15□□□□□ -1.42
CCDC39-205ENST00000485055 BCAR3O75815 825 aa6.15□□□□□ -1.43
CCDC39-205ENST00000485055 G3BP1Q13283 466 aaKnown RBP eCLIP6.15□□□□□ -1.43
CCDC39-205ENST00000485055 DIEXFQ68CQ4 756 aaKnown RBP6.15□□□□□ -1.43
CCDC39-205ENST00000485055 UBE2Q1Q7Z7E8 422 aa6.15□□□□□ -1.43
CCDC39-205ENST00000485055 SMAP1Q8IYB5 467 aaPredicted RBP6.15□□□□□ -1.43
CCDC39-205ENST00000485055 PLPP7Q8NBV4 271 aa6.15□□□□□ -1.43
CCDC39-205ENST00000485055 CCDC8Q9H0W5 538 aaPredicted RBP6.15□□□□□ -1.43
CCDC39-205ENST00000485055 TMCC3Q9ULS5 477 aa6.15□□□□□ -1.43
CCDC39-205ENST00000485055 HPS5Q9UPZ3 1129 aa6.15□□□□□ -1.43
CCDC39-205ENST00000485055 CSADQ9Y600 493 aa6.15□□□□□ -1.43
CCDC39-205ENST00000485055 ZSWIM8A7E2V4 1837 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 PNMA6FA0A0J9YX94 578 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 ZBBXA8MT70 800 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 OAS2P29728 719 aaKnown RBP6.14□□□□□ -1.43
CCDC39-205ENST00000485055 MCAMP43121 646 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 MECOMQ03112 1051 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 DGKZQ13574 1117 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 MORC3Q14149 939 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 DLK2Q6UY11 383 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 THNSL2Q86YJ6 484 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 TRIM44Q96DX7 344 aaPredicted RBP6.14□□□□□ -1.43
CCDC39-205ENST00000485055 CNNM2Q9H8M5 875 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.14□□□□□ -1.43
CCDC39-205ENST00000485055 FBXO2Q9UK22 296 aaPredicted RBP6.14□□□□□ -1.43
CCDC39-205ENST00000485055 RBM19Q9Y4C8 960 aaKnown RBP6.14□□□□□ -1.43
CCDC39-205ENST00000485055 UTRNP46939 3433 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 ROBO3Q96MS0 1386 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 C2orf72A6NCS6 295 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 TRIM64CA6NLI5 447 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 MAP3K13O43283 966 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 ORC4O43929 436 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 EVI5O60447 810 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 HMMRO75330 724 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 PRDX5P30044 214 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 ADORA1P30542 326 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 MLC1Q15049 377 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 OTOP1Q7RTM1 612 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 TRMT44Q8IYL2 757 aaKnown RBP6.14□□□□□ -1.43
CCDC39-205ENST00000485055 KLHDC4Q8TBB5 520 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 PARD3BQ8TEW8 1205 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 GOLGA1Q92805 767 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 PGBD4Q96DM1 585 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 CDHR1Q96JP9 859 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 CLMNQ96JQ2 1002 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 TMEM39BQ9GZU3 492 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 ST7Q9NRC1 585 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 TMEM63CQ9P1W3 806 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 ABCF2Q9UG63 623 aa6.14□□□□□ -1.43
CCDC39-205ENST00000485055 CDV3Q9UKY7 258 aaKnown RBP6.14□□□□□ -1.43
CCDC39-205ENST00000485055 MORC2Q9Y6X9 1032 aaPredicted RBP6.14□□□□□ -1.43
CCDC39-205ENST00000485055 VSTM5A8MXK1 200 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 C19orf81C9J6K1 198 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 PTPRAP18433 802 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 ATP5JP18859 108 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 GUCY2FP51841 1108 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 SP3Q02447 781 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 CCDC158Q5M9N0 1113 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 PDXDC2PQ6P474 469 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 MOB2Q70IA6 237 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 RASSF3Q86WH2 238 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 FLCNQ8NFG4 579 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 USP40Q9NVE5 1235 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 ZNF69Q9UC07 566 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.13□□□□□ -1.43
CCDC39-205ENST00000485055 AK9Q5TCS8 1911 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 MYPNQ86TC9 1320 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 TCRBV5S4A2TA0A5A2 114 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 TRPA1O75762 1119 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 RASGRP1O95267 797 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 BAG3O95817 575 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 RLBP1P12271 317 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 GCLCP48506 637 aaPredicted RBP6.13□□□□□ -1.43
CCDC39-205ENST00000485055 NFKB2Q00653 900 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 GABPAQ06546 454 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 CRHR2Q13324 411 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 LMNTD2Q8IXW0 634 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 KIF1BPQ96EK5 621 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 ZNF333Q96JL9 665 aa6.13□□□□□ -1.43
CCDC39-205ENST00000485055 PA2G4Q9UQ80 394 aaKnown RBP6.13□□□□□ -1.43
CCDC39-205ENST00000485055 CLRN2A0PK11 232 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 NDUFB5O43674 189 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 SLC34A2O95436 690 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 ASMTLO95671 621 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 CYP2E1P05181 493 aaPredicted RBP6.12□□□□□ -1.43
CCDC39-205ENST00000485055 DNAJB2P25686 324 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 GNA15P30679 374 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 HOXC13P31276 330 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 RENBPP51606 427 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 HYIQ5T013 277 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 PPP4R3AQ6IN85 833 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 RNF135Q8IUD6 432 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 PAWRQ96IZ0 340 aaKnown RBP6.12□□□□□ -1.43
CCDC39-205ENST00000485055 SCLT1Q96NL6 688 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms