RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 FEZF2Q8TBJ5 459 aa6.69□□□□□ -1.34
SMC4-215ENST00000484799 PRKAG3Q9UGI9 489 aa6.69□□□□□ -1.34
SMC4-215ENST00000484799 PRRG2O14669 202 aa6.68□□□□□ -1.34
SMC4-215ENST00000484799 SMARCA5O60264 1052 aaPredicted RBP6.68□□□□□ -1.34
SMC4-215ENST00000484799 ASGR2P07307 311 aa6.68□□□□□ -1.34
SMC4-215ENST00000484799 SYN1P17600 705 aa6.68□□□□□ -1.34
SMC4-215ENST00000484799 GTF2A2P52657 109 aa6.68□□□□□ -1.34
SMC4-215ENST00000484799 RPL11P62913 178 aaKnown RBP6.68□□□□□ -1.34
SMC4-215ENST00000484799 EEPD1Q7L9B9 569 aa6.68□□□□□ -1.34
SMC4-215ENST00000484799 DIO2Q92813 273 aa6.68□□□□□ -1.34
SMC4-215ENST00000484799 TSPAN17Q96FV3 270 aa6.68□□□□□ -1.34
SMC4-215ENST00000484799 TRMT2BQ96GJ1 504 aaKnown RBP6.68□□□□□ -1.34
SMC4-215ENST00000484799 YIPF4Q9BSR8 244 aa6.68□□□□□ -1.34
SMC4-215ENST00000484799 BCAS3Q9H6U6 928 aa6.68□□□□□ -1.34
SMC4-215ENST00000484799 LUC7LQ9NQ29 371 aaKnown RBP6.68□□□□□ -1.34
SMC4-215ENST00000484799 PPP1R1BQ9UD71 204 aaPredicted RBP6.68□□□□□ -1.34
SMC4-215ENST00000484799 COA3Q9Y2R0 106 aaPredicted RBP6.68□□□□□ -1.34
SMC4-215ENST00000484799 TIMM13Q9Y5L4 95 aaPredicted RBP6.68□□□□□ -1.34
SMC4-215ENST00000484799 C22orf46C9J442 243 aa6.67□□□□□ -1.34
SMC4-215ENST00000484799 FOXD2O60548 495 aaPredicted RBP6.67□□□□□ -1.34
SMC4-215ENST00000484799 CPP00450 1065 aa6.67□□□□□ -1.34
SMC4-215ENST00000484799 THBDP07204 575 aa6.67□□□□□ -1.34
SMC4-215ENST00000484799 ATF2P15336 505 aa6.67□□□□□ -1.34
SMC4-215ENST00000484799 PMLP29590 882 aa6.67□□□□□ -1.34
SMC4-215ENST00000484799 DNAJA1P31689 397 aaKnown RBP6.67□□□□□ -1.34
SMC4-215ENST00000484799 RBM25P49756 843 aaKnown RBP6.67□□□□□ -1.34
SMC4-215ENST00000484799 CEP68Q76N32 757 aa6.67□□□□□ -1.34
SMC4-215ENST00000484799 COPS5Q92905 334 aa6.67□□□□□ -1.34
SMC4-215ENST00000484799 NKX2-4Q9H2Z4 354 aa6.67□□□□□ -1.34
SMC4-215ENST00000484799 PCDH18Q9HCL0 1135 aa6.67□□□□□ -1.34
SMC4-215ENST00000484799 OTOL1A6NHN0 477 aaPredicted RBP6.66□□□□□ -1.34
SMC4-215ENST00000484799 MEFVO15553 781 aaPredicted RBP6.66□□□□□ -1.34
SMC4-215ENST00000484799 PPP1R11O60927 126 aaPredicted RBP6.66□□□□□ -1.34
SMC4-215ENST00000484799 IGFBP6P24592 240 aaPredicted RBP6.66□□□□□ -1.34
SMC4-215ENST00000484799 ETFBP38117 255 aa6.66□□□□□ -1.34
SMC4-215ENST00000484799 B3GNT8Q7Z7M8 397 aa6.66□□□□□ -1.34
SMC4-215ENST00000484799 ZC3H18Q86VM9 953 aaKnown RBP6.66□□□□□ -1.34
SMC4-215ENST00000484799 BTN2A2Q8WVV5 523 aa6.66□□□□□ -1.34
SMC4-215ENST00000484799 TMEM169Q96HH4 297 aa6.66□□□□□ -1.34
SMC4-215ENST00000484799 MTA3Q9BTC8 594 aa6.66□□□□□ -1.34
SMC4-215ENST00000484799 SUSD5O60279 629 aa6.65□□□□□ -1.34
SMC4-215ENST00000484799 ITGAVP06756 1048 aa6.65□□□□□ -1.34
SMC4-215ENST00000484799 MC3RP41968 323 aa6.65□□□□□ -1.34
SMC4-215ENST00000484799 CAP1Q01518 475 aa6.65□□□□□ -1.34
SMC4-215ENST00000484799 CACNB2Q08289 660 aaPredicted RBP6.65□□□□□ -1.34
SMC4-215ENST00000484799 E4F1Q66K89 784 aaPredicted RBP6.65□□□□□ -1.34
SMC4-215ENST00000484799 CD300LDQ6UXZ3 194 aa6.65□□□□□ -1.34
SMC4-215ENST00000484799 TEX2Q8IWB9 1127 aa6.65□□□□□ -1.34
SMC4-215ENST00000484799 SYT8Q8NBV8 401 aa6.65□□□□□ -1.34
SMC4-215ENST00000484799 SMARCC2Q8TAQ2 1214 aa6.65□□□□□ -1.34
SMC4-215ENST00000484799 FNIP1Q8TF40 1166 aa6.65□□□□□ -1.34
SMC4-215ENST00000484799 SEC14L1Q92503 715 aa6.65□□□□□ -1.34
SMC4-215ENST00000484799 C20orf173Q96LM9 149 aa6.65□□□□□ -1.34
SMC4-215ENST00000484799 CYP2C8P10632 490 aa6.64□□□□□ -1.35
SMC4-215ENST00000484799 SLURP1P55000 103 aa6.64□□□□□ -1.35
SMC4-215ENST00000484799 KCNAB2Q13303 367 aa6.64□□□□□ -1.35
SMC4-215ENST00000484799 CHRNA2Q15822 529 aa6.64□□□□□ -1.35
SMC4-215ENST00000484799 MROH9Q5TGP6 573 aa6.64□□□□□ -1.35
SMC4-215ENST00000484799 ETV3LQ6ZN32 361 aa6.64□□□□□ -1.35
SMC4-215ENST00000484799 MILR1Q7Z6M3 343 aa6.64□□□□□ -1.35
SMC4-215ENST00000484799 CPA5Q8WXQ8 436 aa6.64□□□□□ -1.35
SMC4-215ENST00000484799 ZBTB8AQ96BR9 441 aa6.64□□□□□ -1.35
SMC4-215ENST00000484799 MRGPRX3Q96LB0 322 aa6.64□□□□□ -1.35
SMC4-215ENST00000484799 LGR4Q9BXB1 951 aa6.64□□□□□ -1.35
SMC4-215ENST00000484799 XYLT2Q9H1B5 865 aa6.64□□□□□ -1.35
SMC4-215ENST00000484799 EPN3Q9H201 632 aa6.64□□□□□ -1.35
SMC4-215ENST00000484799 ST7Q9NRC1 585 aa6.64□□□□□ -1.35
SMC4-215ENST00000484799 SIT1Q9Y3P8 196 aa6.64□□□□□ -1.35
SMC4-215ENST00000484799 NCANO14594 1321 aa6.64□□□□□ -1.35
SMC4-215ENST00000484799 FFAR3O14843 346 aa6.63□□□□□ -1.35
SMC4-215ENST00000484799 SARSP49591 514 aaKnown RBP6.63□□□□□ -1.35
SMC4-215ENST00000484799 UBXN11Q5T124 520 aa6.63□□□□□ -1.35
SMC4-215ENST00000484799 ZNF513Q8N8E2 541 aaPredicted RBP6.63□□□□□ -1.35
SMC4-215ENST00000484799 FRS2Q8WU20 508 aa6.63□□□□□ -1.35
SMC4-215ENST00000484799 NGRNQ9NPE2 291 aaKnown RBP6.63□□□□□ -1.35
SMC4-215ENST00000484799 NTMQ9P121 344 aa6.63□□□□□ -1.35
SMC4-215ENST00000484799 A0A0G2JLL6 359 aaPredicted RBP6.62□□□□□ -1.35
SMC4-215ENST00000484799 B2RBV5 119 aa6.62□□□□□ -1.35
SMC4-215ENST00000484799 CELA3BP08861 270 aa6.62□□□□□ -1.35
SMC4-215ENST00000484799 BCL6P41182 706 aa6.62□□□□□ -1.35
SMC4-215ENST00000484799 GJA9P57773 515 aa6.62□□□□□ -1.35
SMC4-215ENST00000484799 PLP2Q04941 152 aa6.62□□□□□ -1.35
SMC4-215ENST00000484799 INF2Q27J81 1249 aa6.62□□□□□ -1.35
SMC4-215ENST00000484799 LCE4AQ5TA78 99 aa6.62□□□□□ -1.35
SMC4-215ENST00000484799 NT5DC1Q5TFE4 455 aa6.62□□□□□ -1.35
SMC4-215ENST00000484799 FRMD5Q7Z6J6 570 aa6.62□□□□□ -1.35
SMC4-215ENST00000484799 ZNF227Q86WZ6 799 aa6.62□□□□□ -1.35
SMC4-215ENST00000484799 PPIL6Q8IXY8 311 aa6.62□□□□□ -1.35
SMC4-215ENST00000484799 ADGRG2Q8IZP9 1017 aa6.62□□□□□ -1.35
SMC4-215ENST00000484799 PLEKHO2Q8TD55 490 aa6.62□□□□□ -1.35
SMC4-215ENST00000484799 ZNF526Q8TF50 670 aaPredicted RBP6.62□□□□□ -1.35
SMC4-215ENST00000484799 ZNF408Q9H9D4 720 aa6.62□□□□□ -1.35
SMC4-215ENST00000484799 RTEL1Q9NZ71 1219 aa6.62□□□□□ -1.35
SMC4-215ENST00000484799 PCDHA2Q9Y5H9 948 aa6.62□□□□□ -1.35
SMC4-215ENST00000484799 E9PSI1 815 aa6.61□□□□□ -1.35
SMC4-215ENST00000484799 GJB6O95452 261 aa6.61□□□□□ -1.35
SMC4-215ENST00000484799 LTBRP36941 435 aa6.61□□□□□ -1.35
SMC4-215ENST00000484799 LSAMPQ13449 338 aa6.61□□□□□ -1.35
SMC4-215ENST00000484799 SMAD4Q13485 552 aaKnown RBP6.61□□□□□ -1.35
SMC4-215ENST00000484799 LIPIQ6XZB0 460 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms