RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-240ENST00000484412 ZMYND12Q9H0C1 365 aa16.09■□□□□ 0.17
HDLBP-240ENST00000484412 PSTPIP2Q9H939 334 aa16.09■□□□□ 0.17
HDLBP-240ENST00000484412 UPF2Q9HAU5 1272 aaKnown RBP16.09■□□□□ 0.17
HDLBP-240ENST00000484412 PXMP2Q9NR77 195 aa16.09■□□□□ 0.17
HDLBP-240ENST00000484412 GNEQ9Y223 722 aaKnown RBP16.09■□□□□ 0.17
HDLBP-240ENST00000484412 LCTP09848 1927 aa16.09■□□□□ 0.17
HDLBP-240ENST00000484412 DNM1LO00429 736 aa16.08■□□□□ 0.16
HDLBP-240ENST00000484412 FOSP01100 380 aaPredicted RBP16.08■□□□□ 0.16
HDLBP-240ENST00000484412 RARBP10826 455 aa16.08■□□□□ 0.16
HDLBP-240ENST00000484412 SCG2P13521 617 aa16.08■□□□□ 0.16
HDLBP-240ENST00000484412 CNGA1P29973 690 aa16.08■□□□□ 0.16
HDLBP-240ENST00000484412 MLLT1Q03111 559 aaPredicted RBP16.08■□□□□ 0.16
HDLBP-240ENST00000484412 CCDC144BQ3MJ40 725 aa16.08■□□□□ 0.16
HDLBP-240ENST00000484412 DUSP28Q4G0W2 176 aa16.08■□□□□ 0.16
HDLBP-240ENST00000484412 C1orf53Q5VUE5 145 aa16.08■□□□□ 0.16
HDLBP-240ENST00000484412 CCSAPQ6IQ19 270 aaPredicted RBP16.08■□□□□ 0.16
HDLBP-240ENST00000484412 KCNV1Q6PIU1 500 aa16.08■□□□□ 0.16
HDLBP-240ENST00000484412 CPLX2Q6PUV4 134 aaKnown RBP16.08■□□□□ 0.16
HDLBP-240ENST00000484412 RAB11FIP4Q86YS3 637 aa16.08■□□□□ 0.16
HDLBP-240ENST00000484412 PURBQ96QR8 312 aaKnown RBP16.08■□□□□ 0.16
HDLBP-240ENST00000484412 PDCD2LQ9BRP1 358 aa16.08■□□□□ 0.16
HDLBP-240ENST00000484412 UPF3AQ9H1J1 476 aaKnown RBP16.08■□□□□ 0.16
HDLBP-240ENST00000484412 RIC8AQ9NPQ8 531 aa16.08■□□□□ 0.16
HDLBP-240ENST00000484412 TPCN1Q9ULQ1 816 aa16.08■□□□□ 0.16
HDLBP-240ENST00000484412 ADAMTS4O75173 837 aa16.07■□□□□ 0.16
HDLBP-240ENST00000484412 CLK2P49760 499 aaKnown RBP16.07■□□□□ 0.16
HDLBP-240ENST00000484412 ARHGEF16Q5VV41 709 aa16.07■□□□□ 0.16
HDLBP-240ENST00000484412 CCDC62Q6P9F0 684 aa16.07■□□□□ 0.16
HDLBP-240ENST00000484412 NECAB2Q7Z6G3 386 aa16.07■□□□□ 0.16
HDLBP-240ENST00000484412 CCDC12Q8WUD4 166 aaPredicted RBP16.07■□□□□ 0.16
HDLBP-240ENST00000484412 ZSCAN31Q96LW9 406 aaPredicted RBP16.07■□□□□ 0.16
HDLBP-240ENST00000484412 SLKQ9H2G2 1235 aaPredicted RBP16.07■□□□□ 0.16
HDLBP-240ENST00000484412 MAFGO15525 162 aa16.06■□□□□ 0.16
HDLBP-240ENST00000484412 DEXIO95424 95 aa16.06■□□□□ 0.16
HDLBP-240ENST00000484412 ICAM3P32942 547 aa16.06■□□□□ 0.16
HDLBP-240ENST00000484412 CCT2P78371 535 aaKnown RBP16.06■□□□□ 0.16
HDLBP-240ENST00000484412 TNFAIP2Q03169 654 aa16.06■□□□□ 0.16
HDLBP-240ENST00000484412 PDE4DQ08499 809 aa16.06■□□□□ 0.16
HDLBP-240ENST00000484412 SCRN1Q12765 414 aa16.06■□□□□ 0.16
HDLBP-240ENST00000484412 PGM5Q15124 567 aa16.06■□□□□ 0.16
HDLBP-240ENST00000484412 ME3Q16798 604 aa16.06■□□□□ 0.16
HDLBP-240ENST00000484412 WWC2Q6AWC2 1192 aa16.06■□□□□ 0.16
HDLBP-240ENST00000484412 CUL5Q93034 780 aa16.06■□□□□ 0.16
HDLBP-240ENST00000484412 LIMCH1Q9UPQ0 1083 aa16.06■□□□□ 0.16
HDLBP-240ENST00000484412 SMCO2A6NFE2 343 aa16.05■□□□□ 0.16
HDLBP-240ENST00000484412 MOXD2PA6NHM9 499 aa16.05■□□□□ 0.16
HDLBP-240ENST00000484412 STXBP3O00186 592 aa16.05■□□□□ 0.16
HDLBP-240ENST00000484412 CPLX1O14810 134 aa16.05■□□□□ 0.16
HDLBP-240ENST00000484412 CTAGE5O15320 804 aa16.05■□□□□ 0.16
HDLBP-240ENST00000484412 CDKL5O76039 1030 aa16.05■□□□□ 0.16
HDLBP-240ENST00000484412 MYCP01106 439 aaPredicted RBP16.05■□□□□ 0.16
HDLBP-240ENST00000484412 GNA11P29992 359 aa16.05■□□□□ 0.16
HDLBP-240ENST00000484412 AKAP17AQ02040 695 aaKnown RBP16.05■□□□□ 0.16
HDLBP-240ENST00000484412 SSRP1Q08945 709 aaKnown RBP16.05■□□□□ 0.16
HDLBP-240ENST00000484412 RABEP1Q15276 862 aa16.05■□□□□ 0.16
HDLBP-240ENST00000484412 GALNT17Q6IS24 598 aa16.05■□□□□ 0.16
HDLBP-240ENST00000484412 TYW1BQ6NUM6 668 aa16.05■□□□□ 0.16
HDLBP-240ENST00000484412 RNF180Q86T96 592 aa16.05■□□□□ 0.16
HDLBP-240ENST00000484412 TRIM22Q8IYM9 498 aa16.05■□□□□ 0.16
HDLBP-240ENST00000484412 SCFD2Q8WU76 684 aa16.05■□□□□ 0.16
HDLBP-240ENST00000484412 TBC1D32Q96NH3 1257 aa16.05■□□□□ 0.16
HDLBP-240ENST00000484412 SEZ6LQ9BYH1 1024 aa16.05■□□□□ 0.16
HDLBP-240ENST00000484412 XPNPEP3Q9NQH7 507 aa16.05■□□□□ 0.16
HDLBP-240ENST00000484412 STK36Q9NRP7 1315 aa16.04■□□□□ 0.16
HDLBP-240ENST00000484412 RGS20O76081 388 aa16.04■□□□□ 0.16
HDLBP-240ENST00000484412 SMPD1P17405 629 aa16.04■□□□□ 0.16
HDLBP-240ENST00000484412 AP3B2Q13367 1082 aa16.04■□□□□ 0.16
HDLBP-240ENST00000484412 LRRC41Q15345 812 aa16.04■□□□□ 0.16
HDLBP-240ENST00000484412 PCNX4Q63HM2 1172 aa16.04■□□□□ 0.16
HDLBP-240ENST00000484412 USP17L6PQ6QN14 398 aa16.04■□□□□ 0.16
HDLBP-240ENST00000484412 PCSK9Q8NBP7 692 aaKnown RBP16.04■□□□□ 0.16
HDLBP-240ENST00000484412 SMARCC2Q8TAQ2 1214 aa16.04■□□□□ 0.16
HDLBP-240ENST00000484412 CRYGNQ8WXF5 182 aa16.04■□□□□ 0.16
HDLBP-240ENST00000484412 EMID1Q96A84 441 aaPredicted RBP16.04■□□□□ 0.16
HDLBP-240ENST00000484412 PAWRQ96IZ0 340 aaKnown RBP16.04■□□□□ 0.16
HDLBP-240ENST00000484412 WDR11Q9BZH6 1224 aa16.04■□□□□ 0.16
HDLBP-240ENST00000484412 SPC25Q9HBM1 224 aa16.04■□□□□ 0.16
HDLBP-240ENST00000484412 PDGFCQ9NRA1 345 aa16.04■□□□□ 0.16
HDLBP-240ENST00000484412 DDX41Q9UJV9 622 aaKnown RBP16.04■□□□□ 0.16
HDLBP-240ENST00000484412 PHF24Q9UPV7 400 aa16.04■□□□□ 0.16
HDLBP-240ENST00000484412 CAPN15O75808 1086 aa16.03■□□□□ 0.16
HDLBP-240ENST00000484412 FARP2O94887 1054 aaPredicted RBP16.03■□□□□ 0.16
HDLBP-240ENST00000484412 HOXA13P31271 388 aaPredicted RBP16.03■□□□□ 0.16
HDLBP-240ENST00000484412 ADCYAP1R1P41586 468 aa16.03■□□□□ 0.16
HDLBP-240ENST00000484412 NAPAP54920 295 aa16.03■□□□□ 0.16
HDLBP-240ENST00000484412 TTLL4Q14679 1199 aa16.03■□□□□ 0.16
HDLBP-240ENST00000484412 PIBF1Q8WXW3 757 aa16.03■□□□□ 0.16
HDLBP-240ENST00000484412 PHKBQ93100 1093 aa16.03■□□□□ 0.16
HDLBP-240ENST00000484412 INPP4AQ96PE3 977 aaPredicted RBP16.03■□□□□ 0.16
HDLBP-240ENST00000484412 SENP7Q9BQF6 1050 aa16.03■□□□□ 0.16
HDLBP-240ENST00000484412 HTATIP2Q9BUP3 242 aa16.03■□□□□ 0.16
HDLBP-240ENST00000484412 C11orf49Q9H6J7 331 aa16.03■□□□□ 0.16
HDLBP-240ENST00000484412 NCOA5Q9HCD5 579 aaKnown RBP16.03■□□□□ 0.16
HDLBP-240ENST00000484412 C6orf50Q9HD87 102 aa16.03■□□□□ 0.16
HDLBP-240ENST00000484412 ZHX1Q9UKY1 873 aaPredicted RBP16.03■□□□□ 0.16
HDLBP-240ENST00000484412 NAP1L2Q9ULW6 460 aaPredicted RBP16.03■□□□□ 0.16
HDLBP-240ENST00000484412 MCM3APO60318 1980 aa16.03■□□□□ 0.16
HDLBP-240ENST00000484412 ELP1O95163 1332 aa16.02■□□□□ 0.16
HDLBP-240ENST00000484412 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.02■□□□□ 0.16
HDLBP-240ENST00000484412 hCG_1642624A0A1W2PR95 340 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms