RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 FUCA1P04066 466 aa7.49□□□□□ -1.21
SCAF11-207ENST00000484275 NTRK1P04629 796 aa7.49□□□□□ -1.21
SCAF11-207ENST00000484275 PLS3P13797 630 aa7.49□□□□□ -1.21
SCAF11-207ENST00000484275 SCRN1Q12765 414 aa7.49□□□□□ -1.21
SCAF11-207ENST00000484275 TRIM26Q12899 539 aaPredicted RBP7.49□□□□□ -1.21
SCAF11-207ENST00000484275 NT5DC1Q5TFE4 455 aa7.49□□□□□ -1.21
SCAF11-207ENST00000484275 PRRT2Q7Z6L0 340 aaPredicted RBP7.49□□□□□ -1.21
SCAF11-207ENST00000484275 BVESQ8NE79 360 aa7.49□□□□□ -1.21
SCAF11-207ENST00000484275 PLEKHO2Q8TD55 490 aa7.49□□□□□ -1.21
SCAF11-207ENST00000484275 CPA5Q8WXQ8 436 aa7.49□□□□□ -1.21
SCAF11-207ENST00000484275 SYT3Q9BQG1 590 aa7.49□□□□□ -1.21
SCAF11-207ENST00000484275 SPATA6Q9NWH7 488 aaPredicted RBP7.49□□□□□ -1.21
SCAF11-207ENST00000484275 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.49□□□□□ -1.21
SCAF11-207ENST00000484275 SLC9A5Q14940 896 aa7.48□□□□□ -1.21
SCAF11-207ENST00000484275 INF2Q27J81 1249 aa7.48□□□□□ -1.21
SCAF11-207ENST00000484275 BDH2Q9BUT1 245 aa7.48□□□□□ -1.21
SCAF11-207ENST00000484275 NUDT5Q9UKK9 219 aa7.48□□□□□ -1.21
SCAF11-207ENST00000484275 DUSP10Q9Y6W6 482 aa7.48□□□□□ -1.21
SCAF11-207ENST00000484275 TRBV23OR9-2A0A075B6M9 112 aa7.47□□□□□ -1.21
SCAF11-207ENST00000484275 NPHS1O60500 1241 aa7.47□□□□□ -1.21
SCAF11-207ENST00000484275 THBDP07204 575 aa7.47□□□□□ -1.21
SCAF11-207ENST00000484275 CACNB2Q08289 660 aaPredicted RBP7.47□□□□□ -1.21
SCAF11-207ENST00000484275 ZFYVE27Q5T4F4 411 aa7.47□□□□□ -1.21
SCAF11-207ENST00000484275 CARFQ8N187 725 aa7.47□□□□□ -1.21
SCAF11-207ENST00000484275 USP33Q8TEY7 942 aa7.47□□□□□ -1.21
SCAF11-207ENST00000484275 ANAPC16Q96DE5 110 aa7.47□□□□□ -1.21
SCAF11-207ENST00000484275 MRGPRX3Q96LB0 322 aa7.47□□□□□ -1.21
SCAF11-207ENST00000484275 MMP19Q99542 508 aa7.47□□□□□ -1.21
SCAF11-207ENST00000484275 APBA2Q99767 749 aa7.47□□□□□ -1.21
SCAF11-207ENST00000484275 TGIF2Q9GZN2 237 aa7.47□□□□□ -1.21
SCAF11-207ENST00000484275 ARNTLO00327 626 aa7.46□□□□□ -1.22
SCAF11-207ENST00000484275 NOBOXO60393 691 aa7.46□□□□□ -1.22
SCAF11-207ENST00000484275 C8BP07358 591 aa7.46□□□□□ -1.22
SCAF11-207ENST00000484275 GTF2IRD2BQ6EKJ0 949 aa7.46□□□□□ -1.22
SCAF11-207ENST00000484275 GTF2IRD2Q86UP8 949 aa7.46□□□□□ -1.22
SCAF11-207ENST00000484275 FERMT3Q86UX7 667 aa7.46□□□□□ -1.22
SCAF11-207ENST00000484275 TRIM59Q8IWR1 403 aa7.46□□□□□ -1.22
SCAF11-207ENST00000484275 DDX11Q96FC9 970 aa7.46□□□□□ -1.22
SCAF11-207ENST00000484275 MARCH2Q9P0N8 246 aa7.46□□□□□ -1.22
SCAF11-207ENST00000484275 TBX1O43435 398 aa7.45□□□□□ -1.22
SCAF11-207ENST00000484275 ZBTB7AO95365 584 aa7.45□□□□□ -1.22
SCAF11-207ENST00000484275 PLP2Q04941 152 aa7.45□□□□□ -1.22
SCAF11-207ENST00000484275 EFEMP1Q12805 493 aa7.45□□□□□ -1.22
SCAF11-207ENST00000484275 GGNQ86UU5 652 aa7.45□□□□□ -1.22
SCAF11-207ENST00000484275 TEX2Q8IWB9 1127 aa7.45□□□□□ -1.22
SCAF11-207ENST00000484275 NPLOC4Q8TAT6 608 aa7.45□□□□□ -1.22
SCAF11-207ENST00000484275 FRS2Q8WU20 508 aa7.45□□□□□ -1.22
SCAF11-207ENST00000484275 INPP5FQ9Y2H2 1132 aa7.45□□□□□ -1.22
SCAF11-207ENST00000484275 SGSM2O43147 1006 aa7.44□□□□□ -1.22
SCAF11-207ENST00000484275 ZNF143P52747 638 aaPredicted RBP7.44□□□□□ -1.22
SCAF11-207ENST00000484275 SMAD4Q13485 552 aaKnown RBP7.44□□□□□ -1.22
SCAF11-207ENST00000484275 POMZP3Q6PJE2 187 aa7.44□□□□□ -1.22
SCAF11-207ENST00000484275 FAM26EQ8N5C1 309 aa7.44□□□□□ -1.22
SCAF11-207ENST00000484275 LINC00482Q8N8I6 264 aa7.44□□□□□ -1.22
SCAF11-207ENST00000484275 ZBTB8AQ96BR9 441 aa7.44□□□□□ -1.22
SCAF11-207ENST00000484275 GORASP1Q9BQQ3 440 aa7.44□□□□□ -1.22
SCAF11-207ENST00000484275 NKX2-4Q9H2Z4 354 aa7.44□□□□□ -1.22
SCAF11-207ENST00000484275 CYP26B1Q9NR63 512 aa7.44□□□□□ -1.22
SCAF11-207ENST00000484275 USP40Q9NVE5 1235 aa7.44□□□□□ -1.22
SCAF11-207ENST00000484275 TMEFF2Q9UIK5 374 aaPredicted RBP7.44□□□□□ -1.22
SCAF11-207ENST00000484275 STRIP2Q9ULQ0 834 aa7.44□□□□□ -1.22
SCAF11-207ENST00000484275 ATF4P18848 351 aaPredicted RBP7.43□□□□□ -1.22
SCAF11-207ENST00000484275 ZNF761Q86XN6 746 aaPredicted RBP7.43□□□□□ -1.22
SCAF11-207ENST00000484275 CCDC103Q8IW40 242 aa7.43□□□□□ -1.22
SCAF11-207ENST00000484275 DDX1Q92499 740 aaKnown RBP7.43□□□□□ -1.22
SCAF11-207ENST00000484275 PPP1R14AQ96A00 147 aa7.43□□□□□ -1.22
SCAF11-207ENST00000484275 BTG4Q9NY30 223 aa7.43□□□□□ -1.22
SCAF11-207ENST00000484275 B2RBV5 119 aa7.42□□□□□ -1.22
SCAF11-207ENST00000484275 NOP56O00567 594 aaKnown RBP7.42□□□□□ -1.22
SCAF11-207ENST00000484275 ADRB1P08588 477 aa7.42□□□□□ -1.22
SCAF11-207ENST00000484275 FPR2P25090 351 aa7.42□□□□□ -1.22
SCAF11-207ENST00000484275 SARSP49591 514 aaKnown RBP7.42□□□□□ -1.22
SCAF11-207ENST00000484275 NCAPHQ15003 741 aa7.42□□□□□ -1.22
SCAF11-207ENST00000484275 UBXN11Q5T124 520 aa7.42□□□□□ -1.22
SCAF11-207ENST00000484275 ERICH6BQ5W0A0 696 aa7.42□□□□□ -1.22
SCAF11-207ENST00000484275 C6orf15Q6UXA7 325 aaPredicted RBP7.42□□□□□ -1.22
SCAF11-207ENST00000484275 CRACR2BQ8N4Y2 399 aaPredicted RBP7.42□□□□□ -1.22
SCAF11-207ENST00000484275 BTN2A2Q8WVV5 523 aa7.42□□□□□ -1.22
SCAF11-207ENST00000484275 LNPKQ9C0E8 428 aa7.42□□□□□ -1.22
SCAF11-207ENST00000484275 MRVI1Q9Y6F6 885 aa7.42□□□□□ -1.22
SCAF11-207ENST00000484275 C22orf46C9J442 243 aa7.41□□□□□ -1.22
SCAF11-207ENST00000484275 SMAD7O15105 426 aaKnown RBP7.41□□□□□ -1.22
SCAF11-207ENST00000484275 NLRP10Q86W26 655 aa7.41□□□□□ -1.22
SCAF11-207ENST00000484275 MIB1Q86YT6 1006 aa7.41□□□□□ -1.22
SCAF11-207ENST00000484275 DCP2Q8IU60 420 aaKnown RBP7.41□□□□□ -1.22
SCAF11-207ENST00000484275 CCSER2Q9H7U1 834 aa7.41□□□□□ -1.22
SCAF11-207ENST00000484275 NTMQ9P121 344 aa7.41□□□□□ -1.22
SCAF11-207ENST00000484275 CYP2C8P10632 490 aa7.4□□□□□ -1.22
SCAF11-207ENST00000484275 CNR2P34972 360 aa7.4□□□□□ -1.22
SCAF11-207ENST00000484275 SF1Q15637 639 aaKnown RBP7.4□□□□□ -1.22
SCAF11-207ENST00000484275 ETV3LQ6ZN32 361 aa7.4□□□□□ -1.22
SCAF11-207ENST00000484275 DBX2Q6ZNG2 339 aa7.4□□□□□ -1.22
SCAF11-207ENST00000484275 C11orf84Q9BUA3 381 aaPredicted RBP7.4□□□□□ -1.22
SCAF11-207ENST00000484275 FBXL7Q9UJT9 491 aa7.4□□□□□ -1.22
SCAF11-207ENST00000484275 ITGAVP06756 1048 aa7.39□□□□□ -1.23
SCAF11-207ENST00000484275 NAT2P11245 290 aa7.39□□□□□ -1.23
SCAF11-207ENST00000484275 SPATS1Q496A3 300 aa7.39□□□□□ -1.23
SCAF11-207ENST00000484275 STK32CQ86UX6 486 aa7.39□□□□□ -1.23
SCAF11-207ENST00000484275 ZNF227Q86WZ6 799 aa7.39□□□□□ -1.23
SCAF11-207ENST00000484275 FAM178BQ8IXR5 827 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms