RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, human

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UFD1-208	ENST00000484101	IK	Q13123	557 aa	Predicted RBP	10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	PAK1	Q13153	545 aa		10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	CUL4B	Q13620	913 aa		10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	KARS	Q15046	597 aa	Known RBP	10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	KRT79	Q5XKE5	535 aa		10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	TTBK2	Q6IQ55	1244 aa		10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	FOXR2	Q6PJQ5	311 aa		10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	SIAH1	Q8IUQ4	282 aa		10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	VSTM4	Q8IW00	320 aa		10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	SAMD3	Q8N6K7	520 aa		10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	LPAR1	Q92633	364 aa		10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	PRIMPOL	Q96LW4	560 aa		10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	MBOAT7	Q96N66	472 aa		10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	C7orf25	Q9BPX7	421 aa		10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	ANO3	Q9BYT9	981 aa		10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	HSD3B7	Q9H2F3	369 aa		10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	VCPKMT	Q9H867	229 aa		10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	MYOZ2	Q9NPC6	264 aa		10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	LRWD1	Q9UFC0	647 aa		10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	DDX25	Q9UHL0	483 aa	Known RBP	10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	PCDHAC2	Q9Y5I4	1007 aa		10.83	□□□□□ -0.68
UFD1-208	ENST00000484101	PVALEF	A0A1B0GWK0	134 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	CLRN2	A0PK11	232 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	BICDL2	A1A5D9	508 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	IQCA1L	A6NCM1	817 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	SPDYE3	A6NKU9	549 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	PSMA7	O14818	248 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	ADAMTS3	O15072	1205 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	TPM2	P07951	284 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	SLC16A2	P36021	539 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	CAP2	P40123	477 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	ECE1	P42892	770 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	TPD52L1	Q16890	204 aa	Predicted RBP	10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	NAALADL2	Q58DX5	795 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	HYI	Q5T013	277 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	CDKAL1	Q5VV42	579 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	HAUS3	Q68CZ6	603 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	CYP4F22	Q6NT55	531 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	FCHSD1	Q86WN1	690 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	POTED	Q86YR6	584 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	GRAMD1C	Q8IYS0	662 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	DHTKD1	Q96HY7	919 aa	Predicted RBP	10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	VEZT	Q9HBM0	779 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	FANCL	Q9NW38	375 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	FEM1B	Q9UK73	627 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101	ABCB11	O95342	1321 aa		10.82	□□□□□ -0.68
UFD1-208	ENST00000484101		A0A087WWV3	80 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101		A0A1B0GTH6	734 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	FAM196B	A6NMK8	535 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	PPP1R3G	B7ZBB8	358 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	TMEM232	C9JQI7	657 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101		H7C1D1	291 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	WNT10B	O00744	389 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	CA12	O43570	354 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	RAD21	O60216	631 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	MARCH6	O60337	910 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	AOC2	O75106	756 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	CYP3A4	P08684	503 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	FDX1	P10109	184 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	PLCG1	P19174	1290 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	SREBF1	P36956	1147 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	FMR1	Q06787	632 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	GRM1	Q13255	1194 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	TRIM14	Q14142	442 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101		Q4G0T1	1027 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	DCAF15	Q66K64	600 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	ISM2	Q6H9L7	571 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	SV2B	Q7L1I2	683 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	TMC6	Q7Z403	805 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	FILIP1	Q7Z7B0	1213 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	FAM114A1	Q8IWE2	563 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	ERMN	Q8TAM6	284 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	CACTIN	Q8WUQ7	758 aa	Known RBP	10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	FAM20A	Q96MK3	541 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	RANBP17	Q9H2T7	1088 aa	Known RBP	10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	EXOC1	Q9NV70	894 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	TMEM260	Q9NX78	707 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	MRPL11	Q9Y3B7	192 aa	Known RBP	10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	PPP2R3B	Q9Y5P8	575 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	ITIH6	Q6UXX5	1313 aa		10.81	□□□□□ -0.68
UFD1-208	ENST00000484101	WDR46	O15213	610 aa	Known RBP	10.8	□□□□□ -0.68
UFD1-208	ENST00000484101	FGFR1OP	O95684	399 aa	Known RBP	10.8	□□□□□ -0.68
UFD1-208	ENST00000484101	TPM1	P09493	284 aa		10.8	□□□□□ -0.68
UFD1-208	ENST00000484101	SKIL	P12757	684 aa		10.8	□□□□□ -0.68
UFD1-208	ENST00000484101	CIITA	P33076	1130 aa		10.8	□□□□□ -0.68
UFD1-208	ENST00000484101	MAP2K2	P36507	400 aa		10.8	□□□□□ -0.68
UFD1-208	ENST00000484101	TEC	P42680	631 aa		10.8	□□□□□ -0.68
UFD1-208	ENST00000484101	TXK	P42681	527 aa		10.8	□□□□□ -0.68
UFD1-208	ENST00000484101	FXR1	P51114	621 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
UFD1-208	ENST00000484101	PSMD2	Q13200	908 aa		10.8	□□□□□ -0.68
UFD1-208	ENST00000484101	UBE2S	Q16763	222 aa		10.8	□□□□□ -0.68
UFD1-208	ENST00000484101	CCDC144B	Q3MJ40	725 aa		10.8	□□□□□ -0.68
UFD1-208	ENST00000484101	TMEM119	Q4V9L6	283 aa		10.8	□□□□□ -0.68
UFD1-208	ENST00000484101	EAPP	Q56P03	285 aa	Predicted RBP	10.8	□□□□□ -0.68
UFD1-208	ENST00000484101	DNTTIP2	Q5QJE6	756 aa	Known RBP	10.8	□□□□□ -0.68
UFD1-208	ENST00000484101	MAP1S	Q66K74	1059 aa	Predicted RBP	10.8	□□□□□ -0.68
UFD1-208	ENST00000484101	SPECC1L	Q69YQ0	1117 aa		10.8	□□□□□ -0.68
UFD1-208	ENST00000484101	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.8	□□□□□ -0.68
UFD1-208	ENST00000484101	APOBEC3F	Q8IUX4	373 aa	Known RBP	10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms