RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 MAN1B1Q9UKM7 699 aa29.59■■■□□ 2.33
SHOX2-204ENST00000483851 ZNF536O15090 1300 aa29.59■■■□□ 2.33
SHOX2-204ENST00000483851 SMTNL1A8MU46 457 aa29.59■■■□□ 2.33
SHOX2-204ENST00000483851 FLOT1O75955 427 aa29.59■■■□□ 2.33
SHOX2-204ENST00000483851 PRR29P0C7W0 189 aa29.59■■■□□ 2.33
SHOX2-204ENST00000483851 EPHX2P34913 555 aa29.59■■■□□ 2.33
SHOX2-204ENST00000483851 DPYDQ12882 1025 aa29.59■■■□□ 2.33
SHOX2-204ENST00000483851 MORC3Q14149 939 aa29.59■■■□□ 2.33
SHOX2-204ENST00000483851 KARSQ15046 597 aaKnown RBP29.59■■■□□ 2.33
SHOX2-204ENST00000483851 SLFN12Q8IYM2 578 aa29.59■■■□□ 2.33
SHOX2-204ENST00000483851 CCPG1Q9ULG6 757 aa29.59■■■□□ 2.33
SHOX2-204ENST00000483851 PARP14Q460N5 1801 aa29.58■■■□□ 2.33
SHOX2-204ENST00000483851 PAPPA2Q9BXP8 1791 aa29.58■■■□□ 2.33
SHOX2-204ENST00000483851 IKBKBO14920 756 aa29.58■■■□□ 2.33
SHOX2-204ENST00000483851 GTPBP6O43824 516 aaPredicted RBP29.58■■■□□ 2.33
SHOX2-204ENST00000483851 KRT26Q7Z3Y9 468 aa29.58■■■□□ 2.33
SHOX2-204ENST00000483851 RASSF8Q8NHQ8 419 aa29.58■■■□□ 2.33
SHOX2-204ENST00000483851 P2RX7Q99572 595 aaKnown RBP29.58■■■□□ 2.33
SHOX2-204ENST00000483851 KCNMB3Q9NPA1 279 aa29.58■■■□□ 2.33
SHOX2-204ENST00000483851 LRWD1Q9UFC0 647 aa29.58■■■□□ 2.33
SHOX2-204ENST00000483851 AFG3L2Q9Y4W6 797 aa29.58■■■□□ 2.33
SHOX2-204ENST00000483851 CDC25AP30304 524 aa29.57■■■□□ 2.32
SHOX2-204ENST00000483851 MCF2L2Q86YR7 1114 aa29.57■■■□□ 2.32
SHOX2-204ENST00000483851 HAS1Q92839 578 aa29.57■■■□□ 2.32
SHOX2-204ENST00000483851 CALML4Q96GE6 196 aa29.57■■■□□ 2.32
SHOX2-204ENST00000483851 TTC12Q9H892 705 aaPredicted RBP29.57■■■□□ 2.32
SHOX2-204ENST00000483851 RABGAP1Q9Y3P9 1069 aa29.57■■■□□ 2.32
SHOX2-204ENST00000483851 SMCHD1A6NHR9 2005 aa29.57■■■□□ 2.32
SHOX2-204ENST00000483851 IQCA1LA6NCM1 817 aa29.57■■■□□ 2.32
SHOX2-204ENST00000483851 ZBED4O75132 1171 aa29.57■■■□□ 2.32
SHOX2-204ENST00000483851 CFBP00751 764 aa29.57■■■□□ 2.32
SHOX2-204ENST00000483851 AFMP43652 599 aa29.57■■■□□ 2.32
SHOX2-204ENST00000483851 SH3D19Q5HYK7 790 aa29.57■■■□□ 2.32
SHOX2-204ENST00000483851 A0A087WWV3 80 aa29.56■■■□□ 2.32
SHOX2-204ENST00000483851 PP2D1A8MPX8 630 aa29.56■■■□□ 2.32
SHOX2-204ENST00000483851 NAALADL2Q58DX5 795 aa29.56■■■□□ 2.32
SHOX2-204ENST00000483851 SARM1Q6SZW1 724 aa29.56■■■□□ 2.32
SHOX2-204ENST00000483851 GRAMD1CQ8IYS0 662 aa29.56■■■□□ 2.32
SHOX2-204ENST00000483851 TMOD4Q9NZQ9 345 aa29.56■■■□□ 2.32
SHOX2-204ENST00000483851 PCDHA12Q9UN75 941 aa29.56■■■□□ 2.32
SHOX2-204ENST00000483851 MARCH6O60337 910 aa29.55■■■□□ 2.32
SHOX2-204ENST00000483851 HOXA13P31271 388 aaPredicted RBP29.55■■■□□ 2.32
SHOX2-204ENST00000483851 NF2P35240 595 aa29.55■■■□□ 2.32
SHOX2-204ENST00000483851 IREB2P48200 963 aaKnown RBP29.55■■■□□ 2.32
SHOX2-204ENST00000483851 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.55■■■□□ 2.32
SHOX2-204ENST00000483851 HSD17B4P51659 736 aa29.55■■■□□ 2.32
SHOX2-204ENST00000483851 TPM4P67936 248 aa29.55■■■□□ 2.32
SHOX2-204ENST00000483851 FAM20AQ96MK3 541 aa29.55■■■□□ 2.32
SHOX2-204ENST00000483851 KBTBD4Q9NVX7 518 aa29.55■■■□□ 2.32
SHOX2-204ENST00000483851 CTDP1Q9Y5B0 961 aaPredicted RBP29.55■■■□□ 2.32
SHOX2-204ENST00000483851 CSADQ9Y600 493 aa29.55■■■□□ 2.32
SHOX2-204ENST00000483851 MYPNQ86TC9 1320 aa29.54■■■□□ 2.32
SHOX2-204ENST00000483851 ADM5C9JUS6 153 aa29.54■■■□□ 2.32
SHOX2-204ENST00000483851 OAZ1P54368 228 aa29.54■■■□□ 2.32
SHOX2-204ENST00000483851 AOPEPQ8N6M6 819 aa29.54■■■□□ 2.32
SHOX2-204ENST00000483851 MMTAG2Q9BU76 263 aaKnown RBP29.54■■■□□ 2.32
SHOX2-204ENST00000483851 RMND1Q9NWS8 449 aa29.54■■■□□ 2.32
SHOX2-204ENST00000483851 STK17AQ9UEE5 414 aa29.54■■■□□ 2.32
SHOX2-204ENST00000483851 FZD1Q9UP38 647 aa29.54■■■□□ 2.32
SHOX2-204ENST00000483851 SNCAIPQ9Y6H5 919 aa29.54■■■□□ 2.32
SHOX2-204ENST00000483851 HMGCS2P54868 508 aa29.53■■■□□ 2.32
SHOX2-204ENST00000483851 KRT79Q5XKE5 535 aa29.53■■■□□ 2.32
SHOX2-204ENST00000483851 AGBL1Q96MI9 1066 aa29.53■■■□□ 2.32
SHOX2-204ENST00000483851 ADAMTS5Q9UNA0 930 aa29.53■■■□□ 2.32
SHOX2-204ENST00000483851 STK24Q9Y6E0 443 aa29.53■■■□□ 2.32
SHOX2-204ENST00000483851 BMP6P22004 513 aa29.53■■■□□ 2.32
SHOX2-204ENST00000483851 VGLL4Q14135 290 aa29.53■■■□□ 2.32
SHOX2-204ENST00000483851 MAF1Q9H063 256 aa29.53■■■□□ 2.32
SHOX2-204ENST00000483851 VWA5AO00534 786 aa29.52■■■□□ 2.32
SHOX2-204ENST00000483851 TAL1P17542 331 aaPredicted RBP29.52■■■□□ 2.32
SHOX2-204ENST00000483851 PLCG1P19174 1290 aa29.52■■■□□ 2.32
SHOX2-204ENST00000483851 SAMD1Q6SPF0 538 aaPredicted RBP29.52■■■□□ 2.32
SHOX2-204ENST00000483851 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.52■■■□□ 2.32
SHOX2-204ENST00000483851 PNMA8AQ86V59 439 aaPredicted RBP29.52■■■□□ 2.32
SHOX2-204ENST00000483851 MTRQ99707 1265 aa29.52■■■□□ 2.32
SHOX2-204ENST00000483851 RLFQ13129 1914 aa29.51■■■□□ 2.32
SHOX2-204ENST00000483851 PLCB2Q00722 1185 aa29.51■■■□□ 2.31
SHOX2-204ENST00000483851 DGKZQ13574 1117 aa29.51■■■□□ 2.31
SHOX2-204ENST00000483851 COG2Q14746 738 aa29.51■■■□□ 2.31
SHOX2-204ENST00000483851 ISM2Q6H9L7 571 aa29.51■■■□□ 2.31
SHOX2-204ENST00000483851 FCHSD1Q86WN1 690 aa29.51■■■□□ 2.31
SHOX2-204ENST00000483851 ETNPPLQ8TBG4 499 aa29.51■■■□□ 2.31
SHOX2-204ENST00000483851 CLEC4DQ8WXI8 215 aa29.51■■■□□ 2.31
SHOX2-204ENST00000483851 DSG3P32926 999 aa29.51■■■□□ 2.31
SHOX2-204ENST00000483851 AMPD3Q01432 767 aa29.51■■■□□ 2.31
SHOX2-204ENST00000483851 MYL5Q02045 173 aa29.51■■■□□ 2.31
SHOX2-204ENST00000483851 CATSPERGQ6ZRH7 1159 aa29.51■■■□□ 2.31
SHOX2-204ENST00000483851 PLA2G4DQ86XP0 818 aa29.51■■■□□ 2.31
SHOX2-204ENST00000483851 LENG9Q96B70 501 aa29.51■■■□□ 2.31
SHOX2-204ENST00000483851 TAF1DQ9H5J8 278 aaPredicted RBP29.51■■■□□ 2.31
SHOX2-204ENST00000483851 RBBP6Q7Z6E9 1792 aaKnown RBP29.5■■■□□ 2.31
SHOX2-204ENST00000483851 OTOFQ9HC10 1997 aa29.5■■■□□ 2.31
SHOX2-204ENST00000483851 ERCC5P28715 1186 aaPredicted RBP29.5■■■□□ 2.31
SHOX2-204ENST00000483851 PRR16Q569H4 304 aa29.5■■■□□ 2.31
SHOX2-204ENST00000483851 TBC1D5Q92609 795 aa29.5■■■□□ 2.31
SHOX2-204ENST00000483851 CDCA5Q96FF9 252 aa29.5■■■□□ 2.31
SHOX2-204ENST00000483851 WDR90Q96KV7 1748 aa29.5■■■□□ 2.31
SHOX2-204ENST00000483851 ATP2A1O14983 1001 aa29.49■■■□□ 2.31
SHOX2-204ENST00000483851 ZNF76P36508 570 aa29.49■■■□□ 2.31
SHOX2-204ENST00000483851 PRKG1Q13976 671 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms