RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 DPY19L2Q6NUT2 758 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 RASSF8Q8NHQ8 419 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 TRPM4Q8TD43 1214 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 AK8Q96MA6 479 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 ZNF341Q9BYN7 854 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 ANO3Q9BYT9 981 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 GOPCQ9HD26 462 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 INTS13Q9NVM9 706 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 MAPK8IP1Q9UQF2 711 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 GTPBP6O43824 516 aaPredicted RBP9.96□□□□□ -0.81
CDC42SE1-204ENST00000483763 FXR2P51116 673 aaKnown RBP eCLIP9.96□□□□□ -0.81
CDC42SE1-204ENST00000483763 HIRAP54198 1017 aaPredicted RBP9.96□□□□□ -0.81
CDC42SE1-204ENST00000483763 ECM1Q16610 540 aa9.96□□□□□ -0.81
CDC42SE1-204ENST00000483763 CCDC174Q6PII3 467 aa9.96□□□□□ -0.81
CDC42SE1-204ENST00000483763 CYP2W1Q8TAV3 490 aa9.96□□□□□ -0.81
CDC42SE1-204ENST00000483763 ENOX1Q8TC92 643 aaKnown RBP9.96□□□□□ -0.81
CDC42SE1-204ENST00000483763 GDAQ9Y2T3 454 aa9.96□□□□□ -0.81
CDC42SE1-204ENST00000483763 FAM86B1E9PN63 330 aa9.96□□□□□ -0.82
CDC42SE1-204ENST00000483763 KLRC4O43908 158 aa9.96□□□□□ -0.82
CDC42SE1-204ENST00000483763 RPN1P04843 607 aaKnown RBP9.96□□□□□ -0.82
CDC42SE1-204ENST00000483763 FAM86B2P0C5J1 330 aa9.96□□□□□ -0.82
CDC42SE1-204ENST00000483763 MMP14P50281 582 aa9.96□□□□□ -0.82
CDC42SE1-204ENST00000483763 GRB10Q13322 594 aa9.96□□□□□ -0.82
CDC42SE1-204ENST00000483763 ORC2Q13416 577 aaPredicted RBP9.96□□□□□ -0.82
CDC42SE1-204ENST00000483763 ANGEL2Q5VTE6 544 aaKnown RBP9.96□□□□□ -0.82
CDC42SE1-204ENST00000483763 KCNK18Q7Z418 384 aa9.96□□□□□ -0.82
CDC42SE1-204ENST00000483763 CCDC34Q96HJ3 373 aa9.96□□□□□ -0.82
CDC42SE1-204ENST00000483763 PNMA5Q96PV4 448 aa9.96□□□□□ -0.82
CDC42SE1-204ENST00000483763 PYM1Q9BRP8 204 aaKnown RBP9.96□□□□□ -0.82
CDC42SE1-204ENST00000483763 BLOC1S4Q9NUP1 217 aa9.96□□□□□ -0.82
CDC42SE1-204ENST00000483763 LRWD1Q9UFC0 647 aa9.96□□□□□ -0.82
CDC42SE1-204ENST00000483763 DICER1Q9UPY3 1922 aaKnown RBP9.96□□□□□ -0.82
CDC42SE1-204ENST00000483763 GOLGA6L6A8MZA4 724 aa9.95□□□□□ -0.82
CDC42SE1-204ENST00000483763 ERCC5P28715 1186 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-204ENST00000483763 ARHGAP4P98171 946 aa9.95□□□□□ -0.82
CDC42SE1-204ENST00000483763 TNFAIP1Q13829 316 aa9.95□□□□□ -0.82
CDC42SE1-204ENST00000483763 GPC2Q8N158 579 aa9.95□□□□□ -0.82
CDC42SE1-204ENST00000483763 KIAA1524Q8TCG1 905 aa9.95□□□□□ -0.82
CDC42SE1-204ENST00000483763 LENG9Q96B70 501 aa9.95□□□□□ -0.82
CDC42SE1-204ENST00000483763 CLEC11AQ9Y240 323 aa9.95□□□□□ -0.82
CDC42SE1-204ENST00000483763 USP11P51784 963 aa9.95□□□□□ -0.82
CDC42SE1-204ENST00000483763 UBASH3AP57075 661 aa9.95□□□□□ -0.82
CDC42SE1-204ENST00000483763 DHX8Q14562 1220 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-204ENST00000483763 KMT5BQ4FZB7 885 aa9.95□□□□□ -0.82
CDC42SE1-204ENST00000483763 LRRC8AQ8IWT6 810 aa9.95□□□□□ -0.82
CDC42SE1-204ENST00000483763 ZKSCAN4Q969J2 545 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-204ENST00000483763 RANBP17Q9H2T7 1088 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-204ENST00000483763 KCNMB3Q9NPA1 279 aa9.95□□□□□ -0.82
CDC42SE1-204ENST00000483763 GPRC5DQ9NZD1 345 aa9.95□□□□□ -0.82
CDC42SE1-204ENST00000483763 CYP3A7-CYP3A51PA0A087WV96 503 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 SERPINC1P01008 464 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 CYP3A7P24462 503 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 PRCPP42785 496 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 PDIA5Q14554 519 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 PRR16Q569H4 304 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 APTXQ7Z2E3 356 aaKnown RBP9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 FCHSD1Q86WN1 690 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 HPS3Q969F9 1004 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 AGBL1Q96MI9 1066 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 MBOAT7Q96N66 472 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 FEZ1Q99689 392 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 TRIM9Q9C026 710 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 PCDHA12Q9UN75 941 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 ZNF536O15090 1300 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 CTNND1O60716 968 aaKnown RBP9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 CFBP00751 764 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 SREBF1P36956 1147 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 STAT3P40763 770 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 PMS1P54277 932 aaKnown RBP9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 TPM4P67936 248 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 AP3B2Q13367 1082 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 ZNF658Q5TYW1 1059 aaPredicted RBP9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 MAP1SQ66K74 1059 aaPredicted RBP9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 SLC30A10Q6XR72 485 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 ETNPPLQ8TBG4 499 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 CHURC1Q8WUH1 139 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 ZFP91Q96JP5 570 aaPredicted RBP9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 GLT8D2Q9H1C3 349 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 BCCIPQ9P287 314 aaKnown RBP eCLIP9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 DACH1Q9UI36 760 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 CTNND2Q9UQB3 1225 aa9.94□□□□□ -0.82
CDC42SE1-204ENST00000483763 SPDYE3A6NKU9 549 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 PIK3CDO00329 1044 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 GCFC2P16383 781 aaKnown RBP9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 SPIRE1Q08AE8 756 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 MTMR2Q13614 643 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 MCM6Q14566 821 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 NOLC1Q14978 699 aaKnown RBP eCLIP9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 ARMCX5Q6P1M9 558 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 TMC6Q7Z403 805 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 LDHDQ86WU2 507 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 EMILIN3Q9NT22 766 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 GGA3Q9NZ52 723 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 SYNRGQ9UMZ2 1314 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 TRIM49BA6NDI0 452 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 MYMKA6NI61 221 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 RRP9O43818 475 aaKnown RBP9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 PLA2G6O60733 806 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 FCER1AP12319 257 aa9.93□□□□□ -0.82
CDC42SE1-204ENST00000483763 UBXN2AP68543 259 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms