RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 PKN3Q6P5Z2 889 aa10.49□□□□□ -0.73
MCF2-207ENST00000483690 FAM126AQ9BYI3 521 aaPredicted RBP10.49□□□□□ -0.73
MCF2-207ENST00000483690 SAMD15Q9P1V8 674 aa10.49□□□□□ -0.73
MCF2-207ENST00000483690 SOD2P04179 222 aa10.48□□□□□ -0.73
MCF2-207ENST00000483690 SRGAP2CP0DJJ0 459 aa10.48□□□□□ -0.73
MCF2-207ENST00000483690 POU3F3P20264 500 aaPredicted RBP10.48□□□□□ -0.73
MCF2-207ENST00000483690 CDK11BP21127 795 aaKnown RBP10.48□□□□□ -0.73
MCF2-207ENST00000483690 ZP2Q05996 745 aa10.48□□□□□ -0.73
MCF2-207ENST00000483690 LSAMPQ13449 338 aa10.48□□□□□ -0.73
MCF2-207ENST00000483690 AFAP1L2Q8N4X5 818 aa10.48□□□□□ -0.73
MCF2-207ENST00000483690 WNK4Q96J92 1243 aa10.48□□□□□ -0.73
MCF2-207ENST00000483690 MTFR1LQ9H019 292 aa10.48□□□□□ -0.73
MCF2-207ENST00000483690 SLAMF8Q9P0V8 285 aa10.48□□□□□ -0.73
MCF2-207ENST00000483690 CD8BP10966 210 aa10.47□□□□□ -0.73
MCF2-207ENST00000483690 FAM47CQ5HY64 1035 aa10.47□□□□□ -0.73
MCF2-207ENST00000483690 ANKLE2Q86XL3 938 aa10.47□□□□□ -0.73
MCF2-207ENST00000483690 DDX42Q86XP3 938 aaKnown RBP eCLIP10.47□□□□□ -0.73
MCF2-207ENST00000483690 PCDH19Q8TAB3 1148 aa10.47□□□□□ -0.73
MCF2-207ENST00000483690 HHIPL1Q96JK4 782 aa10.47□□□□□ -0.73
MCF2-207ENST00000483690 ALPK1Q96QP1 1244 aa10.47□□□□□ -0.73
MCF2-207ENST00000483690 G6PC3Q9BUM1 346 aa10.47□□□□□ -0.73
MCF2-207ENST00000483690 FADS2P1A8MWK0 482 aa10.46□□□□□ -0.73
MCF2-207ENST00000483690 FAM47E-STBD1D6RA91 191 aa10.46□□□□□ -0.73
MCF2-207ENST00000483690 RAB11FIP3O75154 756 aa10.46□□□□□ -0.73
MCF2-207ENST00000483690 PRNPP04156 253 aa10.46□□□□□ -0.73
MCF2-207ENST00000483690 KCNA6P17658 529 aa10.46□□□□□ -0.73
MCF2-207ENST00000483690 GRK2P25098 689 aa10.46□□□□□ -0.73
MCF2-207ENST00000483690 GRK3P35626 688 aa10.46□□□□□ -0.73
MCF2-207ENST00000483690 BCL6P41182 706 aa10.46□□□□□ -0.73
MCF2-207ENST00000483690 KIR2DL1P43626 348 aaPredicted RBP10.46□□□□□ -0.73
MCF2-207ENST00000483690 KIR2DL2P43627 348 aaPredicted RBP10.46□□□□□ -0.73
MCF2-207ENST00000483690 ABHD17CQ6PCB6 329 aa10.46□□□□□ -0.73
MCF2-207ENST00000483690 IGSF22Q8N9C0 903 aa10.46□□□□□ -0.73
MCF2-207ENST00000483690 PRPF38AQ8NAV1 312 aaKnown RBP10.46□□□□□ -0.73
MCF2-207ENST00000483690 ATL2Q8NHH9 583 aa10.46□□□□□ -0.73
MCF2-207ENST00000483690 LINC01599Q8WXQ3 324 aa10.46□□□□□ -0.73
MCF2-207ENST00000483690 ADAMTS10Q9H324 1103 aa10.46□□□□□ -0.73
MCF2-207ENST00000483690 BTG4Q9NY30 223 aa10.46□□□□□ -0.73
MCF2-207ENST00000483690 DDX56Q9NY93 547 aaKnown RBP10.46□□□□□ -0.73
MCF2-207ENST00000483690 A0A1W2PQ45 241 aaPredicted RBP10.45□□□□□ -0.74
MCF2-207ENST00000483690 A0A1W2PQY0 241 aa10.45□□□□□ -0.74
MCF2-207ENST00000483690 GSTA4O15217 222 aa10.45□□□□□ -0.74
MCF2-207ENST00000483690 ZGLP1P0C6A0 271 aa10.45□□□□□ -0.74
MCF2-207ENST00000483690 STRN3Q13033 797 aa10.45□□□□□ -0.74
MCF2-207ENST00000483690 DHCR24Q15392 516 aa10.45□□□□□ -0.74
MCF2-207ENST00000483690 SPRED2Q7Z698 418 aa10.45□□□□□ -0.74
MCF2-207ENST00000483690 VSIG10LQ86VR7 867 aa10.45□□□□□ -0.74
MCF2-207ENST00000483690 IPPKQ9H8X2 491 aa10.45□□□□□ -0.74
MCF2-207ENST00000483690 CLDND1Q9NY35 253 aa10.45□□□□□ -0.74
MCF2-207ENST00000483690 FBXL7Q9UJT9 491 aa10.45□□□□□ -0.74
MCF2-207ENST00000483690 TMEM59LQ9UK28 342 aa10.45□□□□□ -0.74
MCF2-207ENST00000483690 COQ6Q9Y2Z9 468 aa10.45□□□□□ -0.74
MCF2-207ENST00000483690 GLRX3O76003 335 aaKnown RBP10.44□□□□□ -0.74
MCF2-207ENST00000483690 CEBPAP49715 358 aaPredicted RBP10.44□□□□□ -0.74
MCF2-207ENST00000483690 CDKN1CP49918 316 aaPredicted RBP10.44□□□□□ -0.74
MCF2-207ENST00000483690 ST5P78524 1137 aa10.44□□□□□ -0.74
MCF2-207ENST00000483690 SEPT7Q16181 437 aaKnown RBP10.44□□□□□ -0.74
MCF2-207ENST00000483690 RALGPS1Q5JS13 557 aa10.44□□□□□ -0.74
MCF2-207ENST00000483690 ZNF574Q6ZN55 896 aaPredicted RBP10.44□□□□□ -0.74
MCF2-207ENST00000483690 STRA8Q7Z7C7 330 aa10.44□□□□□ -0.74
MCF2-207ENST00000483690 SLCO6A1Q86UG4 719 aa10.44□□□□□ -0.74
MCF2-207ENST00000483690 FBXW5Q969U6 566 aa10.44□□□□□ -0.74
MCF2-207ENST00000483690 TMEM169Q96HH4 297 aa10.44□□□□□ -0.74
MCF2-207ENST00000483690 JMJD8Q96S16 334 aa10.44□□□□□ -0.74
MCF2-207ENST00000483690 CELF4Q9BZC1 486 aaKnown RBP10.44□□□□□ -0.74
MCF2-207ENST00000483690 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.44□□□□□ -0.74
MCF2-207ENST00000483690 HOMER2Q9NSB8 354 aa10.44□□□□□ -0.74
MCF2-207ENST00000483690 PPARGC1AQ9UBK2 798 aaKnown RBP10.44□□□□□ -0.74
MCF2-207ENST00000483690 M0R2C6 588 aa10.43□□□□□ -0.74
MCF2-207ENST00000483690 WNT9AO14904 365 aa10.43□□□□□ -0.74
MCF2-207ENST00000483690 USP2O75604 605 aaPredicted RBP10.43□□□□□ -0.74
MCF2-207ENST00000483690 DNM2P50570 870 aa10.43□□□□□ -0.74
MCF2-207ENST00000483690 RTP1P59025 263 aa10.43□□□□□ -0.74
MCF2-207ENST00000483690 CEP128Q6ZU80 1094 aa10.43□□□□□ -0.74
MCF2-207ENST00000483690 DTX1Q86Y01 620 aa10.43□□□□□ -0.74
MCF2-207ENST00000483690 KIF18BQ86Y91 864 aa10.43□□□□□ -0.74
MCF2-207ENST00000483690 ANKS4BQ8N8V4 417 aa10.43□□□□□ -0.74
MCF2-207ENST00000483690 FLCNQ8NFG4 579 aa10.43□□□□□ -0.74
MCF2-207ENST00000483690 OR2W6PQ8NHA6 318 aa10.43□□□□□ -0.74
MCF2-207ENST00000483690 PANK1Q8TE04 598 aa10.43□□□□□ -0.74
MCF2-207ENST00000483690 DPF3Q92784 378 aa10.43□□□□□ -0.74
MCF2-207ENST00000483690 ORAI3Q9BRQ5 295 aa10.43□□□□□ -0.74
MCF2-207ENST00000483690 TYW1Q9NV66 732 aaKnown RBP10.43□□□□□ -0.74
MCF2-207ENST00000483690 GULP1Q9UBP9 304 aa10.43□□□□□ -0.74
MCF2-207ENST00000483690 CCDC39Q9UFE4 941 aa10.43□□□□□ -0.74
MCF2-207ENST00000483690 EBF1Q9UH73 591 aa10.43□□□□□ -0.74
MCF2-207ENST00000483690 A0A1W2PQ27 194 aa10.42□□□□□ -0.74
MCF2-207ENST00000483690 A0A1W2PQ64 194 aa10.42□□□□□ -0.74
MCF2-207ENST00000483690 A0A1W2PQC6 194 aa10.42□□□□□ -0.74
MCF2-207ENST00000483690 A0A1W2PQD8 194 aa10.42□□□□□ -0.74
MCF2-207ENST00000483690 CCDC66A2RUB6 948 aa10.42□□□□□ -0.74
MCF2-207ENST00000483690 H7BY64 318 aa10.42□□□□□ -0.74
MCF2-207ENST00000483690 CKMP06732 381 aa10.42□□□□□ -0.74
MCF2-207ENST00000483690 SCNN1BP51168 640 aa10.42□□□□□ -0.74
MCF2-207ENST00000483690 SART3Q15020 963 aaKnown RBP10.42□□□□□ -0.74
MCF2-207ENST00000483690 SLC14A2Q15849 920 aa10.42□□□□□ -0.74
MCF2-207ENST00000483690 TMEM177Q53S58 311 aa10.42□□□□□ -0.74
MCF2-207ENST00000483690 CEP68Q76N32 757 aa10.42□□□□□ -0.74
MCF2-207ENST00000483690 USP7Q93009 1102 aa10.42□□□□□ -0.74
MCF2-207ENST00000483690 TRMT2BQ96GJ1 504 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms