RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 ASCC2Q9H1I8 757 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-226ENST00000483656 GPBP1L1Q9HC44 474 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-226ENST00000483656 HOMER2Q9NSB8 354 aa11.46□□□□□ -0.57
HDAC6-226ENST00000483656 RNF146Q9NTX7 359 aa11.46□□□□□ -0.57
HDAC6-226ENST00000483656 BTBD7Q9P203 1132 aa11.46□□□□□ -0.57
HDAC6-226ENST00000483656 KCNH3Q9ULD8 1083 aa11.46□□□□□ -0.57
HDAC6-226ENST00000483656 CTDP1Q9Y5B0 961 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-226ENST00000483656 A0A0G2JMZ2 1700 aa11.46□□□□□ -0.58
HDAC6-226ENST00000483656 RPTORQ8N122 1335 aa11.45□□□□□ -0.58
HDAC6-226ENST00000483656 FSD2A1L4K1 749 aa11.45□□□□□ -0.58
HDAC6-226ENST00000483656 KINO60870 393 aaKnown RBP11.45□□□□□ -0.58
HDAC6-226ENST00000483656 LETM1O95202 739 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-226ENST00000483656 GCFC2P16383 781 aaKnown RBP11.45□□□□□ -0.58
HDAC6-226ENST00000483656 LONP1P36776 959 aaKnown RBP11.45□□□□□ -0.58
HDAC6-226ENST00000483656 STAT3P40763 770 aa11.45□□□□□ -0.58
HDAC6-226ENST00000483656 LONRF3Q496Y0 759 aa11.45□□□□□ -0.58
HDAC6-226ENST00000483656 SPRYD7Q5W111 196 aa11.45□□□□□ -0.58
HDAC6-226ENST00000483656 SNRNP48Q6IEG0 339 aaKnown RBP11.45□□□□□ -0.58
HDAC6-226ENST00000483656 LRSAM1Q6UWE0 723 aa11.45□□□□□ -0.58
HDAC6-226ENST00000483656 SLC30A10Q6XR72 485 aa11.45□□□□□ -0.58
HDAC6-226ENST00000483656 DTHD1Q6ZMT9 781 aa11.45□□□□□ -0.58
HDAC6-226ENST00000483656 FASTKD5Q7L8L6 764 aaKnown RBP11.45□□□□□ -0.58
HDAC6-226ENST00000483656 MCF2L2Q86YR7 1114 aa11.45□□□□□ -0.58
HDAC6-226ENST00000483656 SAMD3Q8N6K7 520 aa11.45□□□□□ -0.58
HDAC6-226ENST00000483656 LENG9Q96B70 501 aa11.45□□□□□ -0.58
HDAC6-226ENST00000483656 TIGD1Q96MW7 591 aa11.45□□□□□ -0.58
HDAC6-226ENST00000483656 NAP1L4Q99733 375 aaKnown RBP11.45□□□□□ -0.58
HDAC6-226ENST00000483656 TEX13BQ9BXU2 312 aa11.45□□□□□ -0.58
HDAC6-226ENST00000483656 PANK2Q9BZ23 570 aa11.45□□□□□ -0.58
HDAC6-226ENST00000483656 TNMDQ9H2S6 317 aa11.45□□□□□ -0.58
HDAC6-226ENST00000483656 FAM13BQ9NYF5 915 aa11.45□□□□□ -0.58
HDAC6-226ENST00000483656 DDX25Q9UHL0 483 aaKnown RBP11.45□□□□□ -0.58
HDAC6-226ENST00000483656 FRMPD4Q14CM0 1322 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 PASKQ96RG2 1323 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 IGLV3-22A0A075B6J6 115 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 PP2D1A8MPX8 630 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 FAM86B1E9PN63 330 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 KIF3CO14782 793 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 FAM86B2P0C5J1 330 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 CDC25AP30304 524 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 HERVK_113P62684 666 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 RPS6P62753 249 aaKnown RBP11.44□□□□□ -0.58
HDAC6-226ENST00000483656 UBXN2AP68543 259 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 CALCRLQ16602 461 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 TKFCQ3LXA3 575 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 Q4G0T1 1027 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 CKAP2LQ8IYA6 745 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 CYP2W1Q8TAV3 490 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 BRI3BPQ8WY22 251 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 GJA10Q969M2 543 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 PURBQ96QR8 312 aaKnown RBP11.44□□□□□ -0.58
HDAC6-226ENST00000483656 TAAR1Q96RJ0 339 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 R3HDMLQ9H3Y0 253 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 KCNMB3Q9NPA1 279 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 MAP3K20Q9NYL2 800 aaKnown RBP11.44□□□□□ -0.58
HDAC6-226ENST00000483656 RBPJLQ9UBG7 517 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 SERTAD1Q9UHV2 236 aa11.44□□□□□ -0.58
HDAC6-226ENST00000483656 TRPM7Q96QT4 1865 aa11.43□□□□□ -0.58
HDAC6-226ENST00000483656 CTAGE5O15320 804 aa11.43□□□□□ -0.58
HDAC6-226ENST00000483656 FOXN1O15353 648 aa11.43□□□□□ -0.58
HDAC6-226ENST00000483656 POLR2DO15514 142 aaKnown RBP11.43□□□□□ -0.58
HDAC6-226ENST00000483656 ACTN4O43707 911 aaKnown RBP11.43□□□□□ -0.58
HDAC6-226ENST00000483656 TECP42680 631 aa11.43□□□□□ -0.58
HDAC6-226ENST00000483656 TXKP42681 527 aa11.43□□□□□ -0.58
HDAC6-226ENST00000483656 FXR2P51116 673 aaKnown RBP eCLIP11.43□□□□□ -0.58
HDAC6-226ENST00000483656 IRX3P78415 501 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-226ENST00000483656 MDM2Q00987 491 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-226ENST00000483656 MKRN3Q13064 507 aaKnown RBP11.43□□□□□ -0.58
HDAC6-226ENST00000483656 BAATQ14032 418 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-226ENST00000483656 E2F4Q16254 413 aa11.43□□□□□ -0.58
HDAC6-226ENST00000483656 NSMFQ6X4W1 530 aa11.43□□□□□ -0.58
HDAC6-226ENST00000483656 KRBA2Q6ZNG9 492 aa11.43□□□□□ -0.58
HDAC6-226ENST00000483656 RNF207Q6ZRF8 634 aa11.43□□□□□ -0.58
HDAC6-226ENST00000483656 RIOX2Q8IUF8 465 aa11.43□□□□□ -0.58
HDAC6-226ENST00000483656 MB21D1Q8N884 522 aa11.43□□□□□ -0.58
HDAC6-226ENST00000483656 IGSF22Q8N9C0 903 aa11.43□□□□□ -0.58
HDAC6-226ENST00000483656 IL31RAQ8NI17 732 aa11.43□□□□□ -0.58
HDAC6-226ENST00000483656 ETNPPLQ8TBG4 499 aa11.43□□□□□ -0.58
HDAC6-226ENST00000483656 LRRC15Q8TF66 581 aa11.43□□□□□ -0.58
HDAC6-226ENST00000483656 ERCC4Q92889 916 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-226ENST00000483656 ZFP91Q96JP5 570 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-226ENST00000483656 MMTAG2Q9BU76 263 aaKnown RBP11.43□□□□□ -0.58
HDAC6-226ENST00000483656 CCSER1Q9C0I3 900 aa11.43□□□□□ -0.58
HDAC6-226ENST00000483656 TXNRD2Q9NNW7 524 aa11.43□□□□□ -0.58
HDAC6-226ENST00000483656 RBBP6Q7Z6E9 1792 aaKnown RBP11.42□□□□□ -0.58
HDAC6-226ENST00000483656 CCL15-CCL14A0A0B4J2E2 113 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 BTBD19C9JJ37 291 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 MSH4O15457 936 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 CETPP11597 493 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 OSBPP22059 807 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 GTF2A2P52657 109 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 HUNKP57058 714 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 PABPC4Q13310 644 aaKnown RBP eCLIP11.42□□□□□ -0.58
HDAC6-226ENST00000483656 PLS1Q14651 629 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 CCL15Q16663 113 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 Q3C1V9 767 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 PRR16Q569H4 304 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 SH3RF1Q7Z6J0 888 aa11.42□□□□□ -0.58
HDAC6-226ENST00000483656 ELOA2Q8IYF1 753 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-226ENST00000483656 PDILTQ8N807 584 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms