RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 GNEQ9Y223 722 aaKnown RBP11.14□□□□□ -0.63
HMG20B-210ENST00000483417 ATP11BQ9Y2G3 1177 aa11.14□□□□□ -0.63
HMG20B-210ENST00000483417 DDX49Q9Y6V7 483 aaKnown RBP11.14□□□□□ -0.63
HMG20B-210ENST00000483417 V9GY48 417 aaPredicted RBP11.14□□□□□ -0.63
HMG20B-210ENST00000483417 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.13□□□□□ -0.63
HMG20B-210ENST00000483417 ASB14A6NK59 587 aa11.13□□□□□ -0.63
HMG20B-210ENST00000483417 GOLGA8AA7E2F4 631 aa11.13□□□□□ -0.63
HMG20B-210ENST00000483417 GOLGA8BA8MQT2 603 aa11.13□□□□□ -0.63
HMG20B-210ENST00000483417 NFIBO00712 420 aa11.13□□□□□ -0.63
HMG20B-210ENST00000483417 PFKFB2O60825 505 aa11.13□□□□□ -0.63
HMG20B-210ENST00000483417 ITGB8P26012 769 aa11.13□□□□□ -0.63
HMG20B-210ENST00000483417 CDK7P50613 346 aa11.13□□□□□ -0.63
HMG20B-210ENST00000483417 BAATQ14032 418 aaPredicted RBP11.13□□□□□ -0.63
HMG20B-210ENST00000483417 KCNA10Q16322 511 aa11.13□□□□□ -0.63
HMG20B-210ENST00000483417 RTN1Q16799 776 aa11.13□□□□□ -0.63
HMG20B-210ENST00000483417 TMEM63BQ5T3F8 832 aa11.13□□□□□ -0.63
HMG20B-210ENST00000483417 GPATCH4Q5T3I0 446 aaKnown RBP11.13□□□□□ -0.63
HMG20B-210ENST00000483417 TMTC3Q6ZXV5 915 aa11.13□□□□□ -0.63
HMG20B-210ENST00000483417 ANKRD33Q7Z3H0 272 aa11.13□□□□□ -0.63
HMG20B-210ENST00000483417 PDLIM7Q9NR12 457 aa11.13□□□□□ -0.63
HMG20B-210ENST00000483417 PDGFCQ9NRA1 345 aa11.13□□□□□ -0.63
HMG20B-210ENST00000483417 MOXD2PA6NHM9 499 aa11.12□□□□□ -0.63
HMG20B-210ENST00000483417 KIAA0355O15063 1070 aa11.12□□□□□ -0.63
HMG20B-210ENST00000483417 ADAMTS3O15072 1205 aa11.12□□□□□ -0.63
HMG20B-210ENST00000483417 CALM1P0DP23 149 aa11.12□□□□□ -0.63
HMG20B-210ENST00000483417 CALM2P0DP24 149 aa11.12□□□□□ -0.63
HMG20B-210ENST00000483417 CALM3P0DP25 149 aa11.12□□□□□ -0.63
HMG20B-210ENST00000483417 METAP2P50579 478 aaKnown RBP eCLIP11.12□□□□□ -0.63
HMG20B-210ENST00000483417 TNFAIP2Q03169 654 aa11.12□□□□□ -0.63
HMG20B-210ENST00000483417 FAAP100Q0VG06 881 aa11.12□□□□□ -0.63
HMG20B-210ENST00000483417 QRICH1Q2TAL8 776 aa11.12□□□□□ -0.63
HMG20B-210ENST00000483417 IQSEC1Q6DN90 963 aa11.12□□□□□ -0.63
HMG20B-210ENST00000483417 GPR153Q6NV75 609 aa11.12□□□□□ -0.63
HMG20B-210ENST00000483417 NSMFQ6X4W1 530 aa11.12□□□□□ -0.63
HMG20B-210ENST00000483417 RGS22Q8NE09 1264 aa11.12□□□□□ -0.63
HMG20B-210ENST00000483417 CTCFLQ8NI51 663 aaPredicted RBP11.12□□□□□ -0.63
HMG20B-210ENST00000483417 PHKBQ93100 1093 aa11.12□□□□□ -0.63
HMG20B-210ENST00000483417 TOX2Q96NM4 488 aa11.12□□□□□ -0.63
HMG20B-210ENST00000483417 PNMA2Q9UL42 364 aa11.12□□□□□ -0.63
HMG20B-210ENST00000483417 LIMCH1Q9UPQ0 1083 aa11.12□□□□□ -0.63
HMG20B-210ENST00000483417 TRIOBPQ9H2D6 2365 aa11.12□□□□□ -0.63
HMG20B-210ENST00000483417 ELP1O95163 1332 aa11.11□□□□□ -0.63
HMG20B-210ENST00000483417 LCTP09848 1927 aa11.11□□□□□ -0.63
HMG20B-210ENST00000483417 MCM3APO60318 1980 aa11.11□□□□□ -0.63
HMG20B-210ENST00000483417 LOC102724159A0A0B4J2E5 919 aa11.11□□□□□ -0.63
HMG20B-210ENST00000483417 RBM47A0AV96 593 aaKnown RBP11.11□□□□□ -0.63
HMG20B-210ENST00000483417 DHX16O60231 1041 aaKnown RBP11.11□□□□□ -0.63
HMG20B-210ENST00000483417 ASGR1P07306 291 aa11.11□□□□□ -0.63
HMG20B-210ENST00000483417 SMPD1P17405 629 aa11.11□□□□□ -0.63
HMG20B-210ENST00000483417 PTGS1P23219 599 aa11.11□□□□□ -0.63
HMG20B-210ENST00000483417 PWP2Q15269 919 aaKnown RBP11.11□□□□□ -0.63
HMG20B-210ENST00000483417 PKN1Q16512 942 aa11.11□□□□□ -0.63
HMG20B-210ENST00000483417 CDC37Q16543 378 aaPredicted RBP11.11□□□□□ -0.63
HMG20B-210ENST00000483417 GNASQ5JWF2 1037 aa11.11□□□□□ -0.63
HMG20B-210ENST00000483417 HOMER1Q86YM7 354 aa11.11□□□□□ -0.63
HMG20B-210ENST00000483417 PCSK9Q8NBP7 692 aaKnown RBP11.11□□□□□ -0.63
HMG20B-210ENST00000483417 BADQ92934 168 aa11.11□□□□□ -0.63
HMG20B-210ENST00000483417 LBHD1Q9BQE6 289 aaPredicted RBP11.11□□□□□ -0.63
HMG20B-210ENST00000483417 SLKQ9H2G2 1235 aaPredicted RBP11.11□□□□□ -0.63
HMG20B-210ENST00000483417 STARD7Q9NQZ5 370 aa11.11□□□□□ -0.63
HMG20B-210ENST00000483417 Q9Y3F1 56 aa11.11□□□□□ -0.63
HMG20B-210ENST00000483417 LAMA3Q16787 3333 aa11.11□□□□□ -0.63
HMG20B-210ENST00000483417 LTBP2Q14767 1821 aa11.11□□□□□ -0.63
HMG20B-210ENST00000483417 JAK2O60674 1132 aa11.1□□□□□ -0.63
HMG20B-210ENST00000483417 CLTBP09497 229 aa11.1□□□□□ -0.63
HMG20B-210ENST00000483417 C6orf222P0C671 652 aaPredicted RBP11.1□□□□□ -0.63
HMG20B-210ENST00000483417 FDPSP14324 419 aaKnown RBP11.1□□□□□ -0.63
HMG20B-210ENST00000483417 EDNRBP24530 442 aa11.1□□□□□ -0.63
HMG20B-210ENST00000483417 SMARCA1P28370 1054 aa11.1□□□□□ -0.63
HMG20B-210ENST00000483417 KIF5BP33176 963 aa11.1□□□□□ -0.63
HMG20B-210ENST00000483417 GNAQP50148 359 aa11.1□□□□□ -0.63
HMG20B-210ENST00000483417 ALDH5A1P51649 535 aaPredicted RBP11.1□□□□□ -0.63
HMG20B-210ENST00000483417 RPS6P62753 249 aaKnown RBP11.1□□□□□ -0.63
HMG20B-210ENST00000483417 ANKRD1Q15327 319 aa11.1□□□□□ -0.63
HMG20B-210ENST00000483417 USH1GQ495M9 461 aa11.1□□□□□ -0.63
HMG20B-210ENST00000483417 TYW1BQ6NUM6 668 aa11.1□□□□□ -0.63
HMG20B-210ENST00000483417 SLC30A10Q6XR72 485 aa11.1□□□□□ -0.63
HMG20B-210ENST00000483417 RNF207Q6ZRF8 634 aa11.1□□□□□ -0.63
HMG20B-210ENST00000483417 SLC43A3Q8NBI5 491 aa11.1□□□□□ -0.63
HMG20B-210ENST00000483417 TMX3Q96JJ7 454 aa11.1□□□□□ -0.63
HMG20B-210ENST00000483417 AIFM3Q96NN9 605 aa11.1□□□□□ -0.63
HMG20B-210ENST00000483417 SPZ1Q9BXG8 430 aa11.1□□□□□ -0.63
HMG20B-210ENST00000483417 MAF1Q9H063 256 aa11.1□□□□□ -0.63
HMG20B-210ENST00000483417 VTA1Q9NP79 307 aa11.1□□□□□ -0.63
HMG20B-210ENST00000483417 GJB4Q9NTQ9 266 aa11.1□□□□□ -0.63
HMG20B-210ENST00000483417 ADD3Q9UEY8 706 aaKnown RBP11.1□□□□□ -0.63
HMG20B-210ENST00000483417 PRKAG2Q9UGJ0 569 aa11.1□□□□□ -0.63
HMG20B-210ENST00000483417 GRIN2DO15399 1336 aa11.09□□□□□ -0.63
HMG20B-210ENST00000483417 PNMA6FA0A0J9YX94 578 aa11.09□□□□□ -0.63
HMG20B-210ENST00000483417 ARVCFO00192 962 aa11.09□□□□□ -0.63
HMG20B-210ENST00000483417 OPLAHO14841 1288 aa11.09□□□□□ -0.63
HMG20B-210ENST00000483417 ZBTB5O15062 677 aa11.09□□□□□ -0.63
HMG20B-210ENST00000483417 DYNC1LI2O43237 492 aaPredicted RBP11.09□□□□□ -0.63
HMG20B-210ENST00000483417 PRPF3O43395 683 aaKnown RBP11.09□□□□□ -0.63
HMG20B-210ENST00000483417 IFNAR1P17181 557 aa11.09□□□□□ -0.63
HMG20B-210ENST00000483417 EPHB4P54760 987 aa11.09□□□□□ -0.63
HMG20B-210ENST00000483417 BEX3Q00994 111 aa11.09□□□□□ -0.63
HMG20B-210ENST00000483417 SHHQ15465 462 aa11.09□□□□□ -0.63
HMG20B-210ENST00000483417 EEPD1Q7L9B9 569 aa11.09□□□□□ -0.63
HMG20B-210ENST00000483417 CCDC83Q8IWF9 413 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms