RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 MAF1Q9H063 256 aa19.18■□□□□ 0.66
VAMP4-204ENST00000482519 SEC63Q9UGP8 760 aaKnown RBP19.18■□□□□ 0.66
VAMP4-204ENST00000482519 CPA1P15085 419 aa19.17■□□□□ 0.66
VAMP4-204ENST00000482519 EDNRBP24530 442 aa19.17■□□□□ 0.66
VAMP4-204ENST00000482519 EXOSC10Q01780 885 aaKnown RBP19.17■□□□□ 0.66
VAMP4-204ENST00000482519 SNX17Q15036 470 aa19.17■□□□□ 0.66
VAMP4-204ENST00000482519 DUSP28Q4G0W2 176 aa19.17■□□□□ 0.66
VAMP4-204ENST00000482519 SEPT14Q6ZU15 432 aa19.17■□□□□ 0.66
VAMP4-204ENST00000482519 SRBD1Q8N5C6 995 aaKnown RBP19.17■□□□□ 0.66
VAMP4-204ENST00000482519 FANCBQ8NB91 859 aa19.17■□□□□ 0.66
VAMP4-204ENST00000482519 JAKMIP1Q96N16 626 aaKnown RBP19.17■□□□□ 0.66
VAMP4-204ENST00000482519 LBHD1Q9BQE6 289 aaPredicted RBP19.17■□□□□ 0.66
VAMP4-204ENST00000482519 SPZ1Q9BXG8 430 aa19.17■□□□□ 0.66
VAMP4-204ENST00000482519 NAP1L2Q9ULW6 460 aaPredicted RBP19.17■□□□□ 0.66
VAMP4-204ENST00000482519 GCOM1H8Y6P7 765 aaPredicted RBP19.16■□□□□ 0.66
VAMP4-204ENST00000482519 CTAGE5O15320 804 aa19.16■□□□□ 0.66
VAMP4-204ENST00000482519 ZEB2O60315 1214 aa19.16■□□□□ 0.66
VAMP4-204ENST00000482519 HMGB1P09429 215 aaKnown RBP19.16■□□□□ 0.66
VAMP4-204ENST00000482519 POLR2MP0CAP2 368 aa19.16■□□□□ 0.66
VAMP4-204ENST00000482519 TXNP10599 105 aaKnown RBP19.16■□□□□ 0.66
VAMP4-204ENST00000482519 HSPA4P34932 840 aa19.16■□□□□ 0.66
VAMP4-204ENST00000482519 HSD17B4P51659 736 aa19.16■□□□□ 0.66
VAMP4-204ENST00000482519 PPP2R5BQ15173 497 aa19.16■□□□□ 0.66
VAMP4-204ENST00000482519 C1orf53Q5VUE5 145 aa19.16■□□□□ 0.66
VAMP4-204ENST00000482519 CXCL17Q6UXB2 119 aa19.16■□□□□ 0.66
VAMP4-204ENST00000482519 FCHSD1Q86WN1 690 aa19.16■□□□□ 0.66
VAMP4-204ENST00000482519 SCFD2Q8WU76 684 aa19.16■□□□□ 0.66
VAMP4-204ENST00000482519 UBE2OQ9C0C9 1292 aaKnown RBP19.16■□□□□ 0.66
VAMP4-204ENST00000482519 RANBP2P49792 3224 aaKnown RBP19.15■□□□□ 0.66
VAMP4-204ENST00000482519 hCG_1642624A0A1W2PR95 340 aa19.15■□□□□ 0.66
VAMP4-204ENST00000482519 RBM47A0AV96 593 aaKnown RBP19.15■□□□□ 0.66
VAMP4-204ENST00000482519 MYCLP12524 364 aaPredicted RBP19.15■□□□□ 0.66
VAMP4-204ENST00000482519 STXBP2Q15833 593 aa19.15■□□□□ 0.66
VAMP4-204ENST00000482519 SGMS1Q86VZ5 419 aa19.15■□□□□ 0.66
VAMP4-204ENST00000482519 OR6J1Q8NGC5 347 aa19.15■□□□□ 0.66
VAMP4-204ENST00000482519 IWS1Q96ST2 819 aa19.15■□□□□ 0.66
VAMP4-204ENST00000482519 GDF15Q99988 308 aa19.15■□□□□ 0.66
VAMP4-204ENST00000482519 PRO3102Q9H379 93 aa19.15■□□□□ 0.66
VAMP4-204ENST00000482519 PXMP2Q9NR77 195 aa19.15■□□□□ 0.66
VAMP4-204ENST00000482519 BRPF3Q9ULD4 1205 aa19.15■□□□□ 0.66
VAMP4-204ENST00000482519 Q9Y3F1 56 aa19.15■□□□□ 0.66
VAMP4-204ENST00000482519 SNX14Q9Y5W7 946 aa19.15■□□□□ 0.66
VAMP4-204ENST00000482519 ELP1O95163 1332 aa19.15■□□□□ 0.66
VAMP4-204ENST00000482519 ZBTB43O43298 467 aa19.14■□□□□ 0.65
VAMP4-204ENST00000482519 SMARCA1P28370 1054 aa19.14■□□□□ 0.65
VAMP4-204ENST00000482519 TTLL4Q14679 1199 aa19.14■□□□□ 0.65
VAMP4-204ENST00000482519 APOA5Q6Q788 366 aa19.14■□□□□ 0.65
VAMP4-204ENST00000482519 SH3RF1Q7Z6J0 888 aa19.14■□□□□ 0.65
VAMP4-204ENST00000482519 COPS5Q92905 334 aa19.14■□□□□ 0.65
VAMP4-204ENST00000482519 PDLIM7Q9NR12 457 aa19.14■□□□□ 0.65
VAMP4-204ENST00000482519 MAP3K20Q9NYL2 800 aaKnown RBP19.14■□□□□ 0.65
VAMP4-204ENST00000482519 A0A0U1RQG5 324 aaPredicted RBP19.13■□□□□ 0.65
VAMP4-204ENST00000482519 KLF18A0A0U1RQI7 1052 aa19.13■□□□□ 0.65
VAMP4-204ENST00000482519 DCDC2CA8MYV0 355 aa19.13■□□□□ 0.65
VAMP4-204ENST00000482519 NR3C2P08235 984 aa19.13■□□□□ 0.65
VAMP4-204ENST00000482519 CLTBP09497 229 aa19.13■□□□□ 0.65
VAMP4-204ENST00000482519 NKX3-2P78367 333 aa19.13■□□□□ 0.65
VAMP4-204ENST00000482519 BLOC1S2Q6QNY1 142 aa19.13■□□□□ 0.65
VAMP4-204ENST00000482519 TMTC3Q6ZXV5 915 aa19.13■□□□□ 0.65
VAMP4-204ENST00000482519 KCNB2Q92953 911 aa19.13■□□□□ 0.65
VAMP4-204ENST00000482519 TMEM39AQ9NV64 488 aa19.13■□□□□ 0.65
VAMP4-204ENST00000482519 TRIM43BA6NCK2 446 aa19.12■□□□□ 0.65
VAMP4-204ENST00000482519 MYL3P08590 195 aa19.12■□□□□ 0.65
VAMP4-204ENST00000482519 BMP8BP34820 402 aa19.12■□□□□ 0.65
VAMP4-204ENST00000482519 CPT1AP50416 773 aa19.12■□□□□ 0.65
VAMP4-204ENST00000482519 RTN1Q16799 776 aa19.12■□□□□ 0.65
VAMP4-204ENST00000482519 Q6ZUG5 572 aa19.12■□□□□ 0.65
VAMP4-204ENST00000482519 SAMD3Q8N6K7 520 aa19.12■□□□□ 0.65
VAMP4-204ENST00000482519 TRIM43Q96BQ3 446 aaPredicted RBP19.12■□□□□ 0.65
VAMP4-204ENST00000482519 ZFP91Q96JP5 570 aaPredicted RBP19.12■□□□□ 0.65
VAMP4-204ENST00000482519 GOLGA8AA7E2F4 631 aa19.11■□□□□ 0.65
VAMP4-204ENST00000482519 GOLGA8BA8MQT2 603 aa19.11■□□□□ 0.65
VAMP4-204ENST00000482519 ARVCFO00192 962 aa19.11■□□□□ 0.65
VAMP4-204ENST00000482519 NKRFO15226 690 aaKnown RBP eCLIP19.11■□□□□ 0.65
VAMP4-204ENST00000482519 EIF3JO75822 258 aaKnown RBP19.11■□□□□ 0.65
VAMP4-204ENST00000482519 CABYRO75952 493 aa19.11■□□□□ 0.65
VAMP4-204ENST00000482519 ARIH2O95376 493 aa19.11■□□□□ 0.65
VAMP4-204ENST00000482519 CASTP20810 708 aaKnown RBP19.11■□□□□ 0.65
VAMP4-204ENST00000482519 PSMA5P28066 241 aa19.11■□□□□ 0.65
VAMP4-204ENST00000482519 FXR1P51114 621 aaKnown RBP eCLIP19.11■□□□□ 0.65
VAMP4-204ENST00000482519 PSMC6P62333 389 aa19.11■□□□□ 0.65
VAMP4-204ENST00000482519 GHRHRQ02643 423 aa19.11■□□□□ 0.65
VAMP4-204ENST00000482519 LY6KQ17RY6 165 aa19.11■□□□□ 0.65
VAMP4-204ENST00000482519 BRDTQ58F21 947 aaPredicted RBP19.11■□□□□ 0.65
VAMP4-204ENST00000482519 ANKRD33Q7Z3H0 272 aa19.11■□□□□ 0.65
VAMP4-204ENST00000482519 SMARCC2Q8TAQ2 1214 aa19.11■□□□□ 0.65
VAMP4-204ENST00000482519 BADQ92934 168 aa19.11■□□□□ 0.65
VAMP4-204ENST00000482519 CUL5Q93034 780 aa19.11■□□□□ 0.65
VAMP4-204ENST00000482519 PDCD2LQ9BRP1 358 aa19.11■□□□□ 0.65
VAMP4-204ENST00000482519 RBM28Q9NW13 759 aaKnown RBP19.11■□□□□ 0.65
VAMP4-204ENST00000482519 KIAA1217Q5T5P2 1943 aa19.1■□□□□ 0.65
VAMP4-204ENST00000482519 MROH7Q68CQ1 1323 aa19.1■□□□□ 0.65
VAMP4-204ENST00000482519 APOBRQ0VD83 1088 aa19.1■□□□□ 0.65
VAMP4-204ENST00000482519 FAAP100Q0VG06 881 aa19.1■□□□□ 0.65
VAMP4-204ENST00000482519 PGM5Q15124 567 aa19.1■□□□□ 0.65
VAMP4-204ENST00000482519 USP17L6PQ6QN14 398 aa19.1■□□□□ 0.65
VAMP4-204ENST00000482519 HEATR3Q7Z4Q2 680 aa19.1■□□□□ 0.65
VAMP4-204ENST00000482519 IL31RAQ8NI17 732 aa19.1■□□□□ 0.65
VAMP4-204ENST00000482519 BRF1Q92994 677 aa19.1■□□□□ 0.65
VAMP4-204ENST00000482519 TOX2Q96NM4 488 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms