RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 ARVCFO00192 962 aa8.23□□□□□ -1.09
SF3B1-210ENST00000482158 MSL3P1P0C860 447 aa8.23□□□□□ -1.09
SF3B1-210ENST00000482158 BCL6P41182 706 aa8.23□□□□□ -1.09
SF3B1-210ENST00000482158 GUCY1A3Q02108 690 aa8.23□□□□□ -1.09
SF3B1-210ENST00000482158 CHRNEQ04844 493 aa8.23□□□□□ -1.09
SF3B1-210ENST00000482158 NR0B2Q15466 257 aa8.23□□□□□ -1.09
SF3B1-210ENST00000482158 ARTNQ5T4W7 220 aa8.23□□□□□ -1.09
SF3B1-210ENST00000482158 ABHD17CQ6PCB6 329 aa8.23□□□□□ -1.09
SF3B1-210ENST00000482158 FILIP1Q7Z7B0 1213 aa8.23□□□□□ -1.09
SF3B1-210ENST00000482158 THNSL2Q86YJ6 484 aa8.23□□□□□ -1.09
SF3B1-210ENST00000482158 GPATCH3Q96I76 525 aa8.23□□□□□ -1.09
SF3B1-210ENST00000482158 MAGEB10Q96LZ2 347 aaPredicted RBP8.23□□□□□ -1.09
SF3B1-210ENST00000482158 MTA3Q9BTC8 594 aa8.23□□□□□ -1.09
SF3B1-210ENST00000482158 GULP1Q9UBP9 304 aa8.23□□□□□ -1.09
SF3B1-210ENST00000482158 CTNND2Q9UQB3 1225 aa8.23□□□□□ -1.09
SF3B1-210ENST00000482158 FITM1A5D6W6 292 aa8.22□□□□□ -1.09
SF3B1-210ENST00000482158 GSG1L2A8MUP6 293 aa8.22□□□□□ -1.09
SF3B1-210ENST00000482158 NPHS1O60500 1241 aa8.22□□□□□ -1.09
SF3B1-210ENST00000482158 PSPNO60542 156 aa8.22□□□□□ -1.09
SF3B1-210ENST00000482158 VIL1P09327 827 aaKnown RBP8.22□□□□□ -1.09
SF3B1-210ENST00000482158 TRHRP34981 398 aaPredicted RBP8.22□□□□□ -1.09
SF3B1-210ENST00000482158 MVKQ03426 396 aa8.22□□□□□ -1.09
SF3B1-210ENST00000482158 LRRTM3Q86VH5 581 aa8.22□□□□□ -1.09
SF3B1-210ENST00000482158 JAMLQ86YT9 394 aa8.22□□□□□ -1.09
SF3B1-210ENST00000482158 ABI1Q8IZP0 508 aa8.22□□□□□ -1.09
SF3B1-210ENST00000482158 Q8N1Y9 231 aa8.22□□□□□ -1.09
SF3B1-210ENST00000482158 PCDH19Q8TAB3 1148 aa8.22□□□□□ -1.09
SF3B1-210ENST00000482158 SHISA4Q96DD7 197 aa8.22□□□□□ -1.09
SF3B1-210ENST00000482158 CCDC120Q96HB5 630 aa8.22□□□□□ -1.09
SF3B1-210ENST00000482158 TARS2Q9BW92 718 aaKnown RBP8.22□□□□□ -1.09
SF3B1-210ENST00000482158 C19orf44Q9H6X5 657 aa8.22□□□□□ -1.09
SF3B1-210ENST00000482158 IMPACTQ9P2X3 320 aa8.22□□□□□ -1.09
SF3B1-210ENST00000482158 ACSL6Q9UKU0 697 aa8.22□□□□□ -1.09
SF3B1-210ENST00000482158 WTIPA6NIX2 430 aaPredicted RBP8.21□□□□□ -1.1
SF3B1-210ENST00000482158 DNAJC6O75061 913 aa8.21□□□□□ -1.1
SF3B1-210ENST00000482158 ASLP04424 464 aa8.21□□□□□ -1.1
SF3B1-210ENST00000482158 MYCLP1P12525 358 aaPredicted RBP8.21□□□□□ -1.1
SF3B1-210ENST00000482158 RPL11P62913 178 aaKnown RBP8.21□□□□□ -1.1
SF3B1-210ENST00000482158 LSAMPQ13449 338 aa8.21□□□□□ -1.1
SF3B1-210ENST00000482158 RNF187Q5TA31 235 aaPredicted RBP8.21□□□□□ -1.1
SF3B1-210ENST00000482158 MTDHQ86UE4 582 aaKnown RBP8.21□□□□□ -1.1
SF3B1-210ENST00000482158 SPPL2CQ8IUH8 684 aa8.21□□□□□ -1.1
SF3B1-210ENST00000482158 OXR1Q8N573 874 aa8.21□□□□□ -1.1
SF3B1-210ENST00000482158 PLEKHO2Q8TD55 490 aa8.21□□□□□ -1.1
SF3B1-210ENST00000482158 DDX1Q92499 740 aaKnown RBP8.21□□□□□ -1.1
SF3B1-210ENST00000482158 SPC25Q9HBM1 224 aa8.21□□□□□ -1.1
SF3B1-210ENST00000482158 SOD2P04179 222 aa8.2□□□□□ -1.1
SF3B1-210ENST00000482158 CKMP06732 381 aa8.2□□□□□ -1.1
SF3B1-210ENST00000482158 FPR2P25090 351 aa8.2□□□□□ -1.1
SF3B1-210ENST00000482158 CORO7P57737 925 aa8.2□□□□□ -1.1
SF3B1-210ENST00000482158 SLC14A2Q15849 920 aa8.2□□□□□ -1.1
SF3B1-210ENST00000482158 KIZQ2M2Z5 673 aa8.2□□□□□ -1.1
SF3B1-210ENST00000482158 TAF7LQ5H9L4 462 aa8.2□□□□□ -1.1
SF3B1-210ENST00000482158 GALNT18Q6P9A2 607 aa8.2□□□□□ -1.1
SF3B1-210ENST00000482158 NLRX1Q86UT6 975 aa8.2□□□□□ -1.1
SF3B1-210ENST00000482158 MTFR1LQ9H019 292 aa8.2□□□□□ -1.1
SF3B1-210ENST00000482158 RWDD3Q9Y3V2 267 aa8.2□□□□□ -1.1
SF3B1-210ENST00000482158 WNT9AO14904 365 aa8.19□□□□□ -1.1
SF3B1-210ENST00000482158 MYO1BO43795 1136 aa8.19□□□□□ -1.1
SF3B1-210ENST00000482158 PDE8AO60658 829 aa8.19□□□□□ -1.1
SF3B1-210ENST00000482158 POU3F2P20265 443 aaPredicted RBP8.19□□□□□ -1.1
SF3B1-210ENST00000482158 IGFALSP35858 605 aa8.19□□□□□ -1.1
SF3B1-210ENST00000482158 GTF2A2P52657 109 aa8.19□□□□□ -1.1
SF3B1-210ENST00000482158 GP2P55259 537 aaKnown RBP8.19□□□□□ -1.1
SF3B1-210ENST00000482158 PAK1Q13153 545 aa8.19□□□□□ -1.1
SF3B1-210ENST00000482158 CNNM4Q6P4Q7 775 aa8.19□□□□□ -1.1
SF3B1-210ENST00000482158 KRT26Q7Z3Y9 468 aa8.19□□□□□ -1.1
SF3B1-210ENST00000482158 RNF180Q86T96 592 aa8.19□□□□□ -1.1
SF3B1-210ENST00000482158 TEX2Q8IWB9 1127 aa8.19□□□□□ -1.1
SF3B1-210ENST00000482158 IPPKQ9H8X2 491 aa8.19□□□□□ -1.1
SF3B1-210ENST00000482158 RC3H2Q9HBD1 1191 aaKnown RBP8.19□□□□□ -1.1
SF3B1-210ENST00000482158 BTG4Q9NY30 223 aa8.19□□□□□ -1.1
SF3B1-210ENST00000482158 MARCH2Q9P0N8 246 aa8.19□□□□□ -1.1
SF3B1-210ENST00000482158 TAF6LQ9Y6J9 622 aa8.19□□□□□ -1.1
SF3B1-210ENST00000482158 X6R8D5 127 aa8.19□□□□□ -1.1
SF3B1-210ENST00000482158 OPA1O60313 960 aa8.18□□□□□ -1.1
SF3B1-210ENST00000482158 SRGAP2CP0DJJ0 459 aa8.18□□□□□ -1.1
SF3B1-210ENST00000482158 PRKCAP17252 672 aa8.18□□□□□ -1.1
SF3B1-210ENST00000482158 NAT1P18440 290 aa8.18□□□□□ -1.1
SF3B1-210ENST00000482158 POU3F3P20264 500 aaPredicted RBP8.18□□□□□ -1.1
SF3B1-210ENST00000482158 GRK2P25098 689 aa8.18□□□□□ -1.1
SF3B1-210ENST00000482158 GRK3P35626 688 aa8.18□□□□□ -1.1
SF3B1-210ENST00000482158 STAT3P40763 770 aa8.18□□□□□ -1.1
SF3B1-210ENST00000482158 GALK1P51570 392 aa8.18□□□□□ -1.1
SF3B1-210ENST00000482158 CBLL1Q75N03 491 aa8.18□□□□□ -1.1
SF3B1-210ENST00000482158 CEP68Q76N32 757 aa8.18□□□□□ -1.1
SF3B1-210ENST00000482158 NUP43Q8NFH3 380 aa8.18□□□□□ -1.1
SF3B1-210ENST00000482158 JAM3Q9BX67 310 aa8.18□□□□□ -1.1
SF3B1-210ENST00000482158 FAM126AQ9BYI3 521 aaPredicted RBP8.18□□□□□ -1.1
SF3B1-210ENST00000482158 TMX1Q9H3N1 280 aa8.18□□□□□ -1.1
SF3B1-210ENST00000482158 CLDND1Q9NY35 253 aa8.18□□□□□ -1.1
SF3B1-210ENST00000482158 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.18□□□□□ -1.1
SF3B1-210ENST00000482158 OAS3Q9Y6K5 1087 aaKnown RBP8.18□□□□□ -1.1
SF3B1-210ENST00000482158 SCO2A0A1W2PP80 73 aa8.17□□□□□ -1.1
SF3B1-210ENST00000482158 H7BY64 318 aa8.17□□□□□ -1.1
SF3B1-210ENST00000482158 FUCA1P04066 466 aa8.17□□□□□ -1.1
SF3B1-210ENST00000482158 PCBP1Q15365 356 aaKnown RBP eCLIP8.17□□□□□ -1.1
SF3B1-210ENST00000482158 PTPROQ16827 1216 aa8.17□□□□□ -1.1
SF3B1-210ENST00000482158 ZCCHC8Q6NZY4 707 aaKnown RBP8.17□□□□□ -1.1
SF3B1-210ENST00000482158 FLAD1Q8NFF5 587 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms