RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 LBHD1Q9BQE6 289 aaPredicted RBP17.15■□□□□ 0.34
OPTN-210ENST00000482140 COL20A1Q9P218 1284 aa17.15■□□□□ 0.34
OPTN-210ENST00000482140 KIAA1217Q5T5P2 1943 aa17.14■□□□□ 0.33
OPTN-210ENST00000482140 RBM47A0AV96 593 aaKnown RBP17.14■□□□□ 0.33
OPTN-210ENST00000482140 GCOM1H8Y6P7 765 aaPredicted RBP17.14■□□□□ 0.33
OPTN-210ENST00000482140 NKRFO15226 690 aaKnown RBP eCLIP17.14■□□□□ 0.33
OPTN-210ENST00000482140 PQBP1O60828 265 aaKnown RBP17.14■□□□□ 0.33
OPTN-210ENST00000482140 PLEKHA8P1O95397 391 aa17.14■□□□□ 0.33
OPTN-210ENST00000482140 POLR2MP0CAP2 368 aa17.14■□□□□ 0.33
OPTN-210ENST00000482140 EIF2AK2P19525 551 aaKnown RBP17.14■□□□□ 0.33
OPTN-210ENST00000482140 HSPA4P34932 840 aa17.14■□□□□ 0.33
OPTN-210ENST00000482140 HSD17B4P51659 736 aa17.14■□□□□ 0.33
OPTN-210ENST00000482140 NKX3-2P78367 333 aa17.14■□□□□ 0.33
OPTN-210ENST00000482140 EXOSC10Q01780 885 aaKnown RBP17.14■□□□□ 0.33
OPTN-210ENST00000482140 TTLL4Q14679 1199 aa17.14■□□□□ 0.33
OPTN-210ENST00000482140 STXBP2Q15833 593 aa17.14■□□□□ 0.33
OPTN-210ENST00000482140 OR6J1Q8NGC5 347 aa17.14■□□□□ 0.33
OPTN-210ENST00000482140 JAKMIP1Q96N16 626 aaKnown RBP17.14■□□□□ 0.33
OPTN-210ENST00000482140 GDF15Q99988 308 aa17.14■□□□□ 0.33
OPTN-210ENST00000482140 ELP1O95163 1332 aa17.14■□□□□ 0.33
OPTN-210ENST00000482140 TRIOBPQ9H2D6 2365 aa17.14■□□□□ 0.33
OPTN-210ENST00000482140 A0A0U1RQG5 324 aaPredicted RBP17.13■□□□□ 0.33
OPTN-210ENST00000482140 OPLAHO14841 1288 aa17.13■□□□□ 0.33
OPTN-210ENST00000482140 HOXA13P31271 388 aaPredicted RBP17.13■□□□□ 0.33
OPTN-210ENST00000482140 MDM2Q00987 491 aaPredicted RBP17.13■□□□□ 0.33
OPTN-210ENST00000482140 GHRHRQ02643 423 aa17.13■□□□□ 0.33
OPTN-210ENST00000482140 TLE2Q04725 743 aa17.13■□□□□ 0.33
OPTN-210ENST00000482140 APOA5Q6Q788 366 aa17.13■□□□□ 0.33
OPTN-210ENST00000482140 SRBD1Q8N5C6 995 aaKnown RBP17.13■□□□□ 0.33
OPTN-210ENST00000482140 FANCBQ8NB91 859 aa17.13■□□□□ 0.33
OPTN-210ENST00000482140 PXMP2Q9NR77 195 aa17.13■□□□□ 0.33
OPTN-210ENST00000482140 NAP1L2Q9ULW6 460 aaPredicted RBP17.13■□□□□ 0.33
OPTN-210ENST00000482140 SNX14Q9Y5W7 946 aa17.13■□□□□ 0.33
OPTN-210ENST00000482140 MROH7Q68CQ1 1323 aa17.13■□□□□ 0.33
OPTN-210ENST00000482140 A0A1W2PPC1 479 aa17.12■□□□□ 0.33
OPTN-210ENST00000482140 DCDC2CA8MYV0 355 aa17.12■□□□□ 0.33
OPTN-210ENST00000482140 CTAGE5O15320 804 aa17.12■□□□□ 0.33
OPTN-210ENST00000482140 ZBTB43O43298 467 aa17.12■□□□□ 0.33
OPTN-210ENST00000482140 CABYRO75952 493 aa17.12■□□□□ 0.33
OPTN-210ENST00000482140 CLTBP09497 229 aa17.12■□□□□ 0.33
OPTN-210ENST00000482140 TXNP10599 105 aaKnown RBP17.12■□□□□ 0.33
OPTN-210ENST00000482140 PTGS1P23219 599 aa17.12■□□□□ 0.33
OPTN-210ENST00000482140 PSMA5P28066 241 aa17.12■□□□□ 0.33
OPTN-210ENST00000482140 BMP8BP34820 402 aa17.12■□□□□ 0.33
OPTN-210ENST00000482140 CPT1AP50416 773 aa17.12■□□□□ 0.33
OPTN-210ENST00000482140 BRDTQ58F21 947 aaPredicted RBP17.12■□□□□ 0.33
OPTN-210ENST00000482140 TMEM63BQ5T3F8 832 aa17.12■□□□□ 0.33
OPTN-210ENST00000482140 BLOC1S2Q6QNY1 142 aa17.12■□□□□ 0.33
OPTN-210ENST00000482140 CXCL17Q6UXB2 119 aa17.12■□□□□ 0.33
OPTN-210ENST00000482140 SEPT14Q6ZU15 432 aa17.12■□□□□ 0.33
OPTN-210ENST00000482140 CMTR1Q8N1G2 835 aaKnown RBP17.12■□□□□ 0.33
OPTN-210ENST00000482140 CCDC82Q8N4S0 544 aa17.12■□□□□ 0.33
OPTN-210ENST00000482140 KCNB2Q92953 911 aa17.12■□□□□ 0.33
OPTN-210ENST00000482140 CUL5Q93034 780 aa17.12■□□□□ 0.33
OPTN-210ENST00000482140 UBE2OQ9C0C9 1292 aaKnown RBP17.12■□□□□ 0.33
OPTN-210ENST00000482140 PRO3102Q9H379 93 aa17.12■□□□□ 0.33
OPTN-210ENST00000482140 PDLIM7Q9NR12 457 aa17.12■□□□□ 0.33
OPTN-210ENST00000482140 RBM28Q9NW13 759 aaKnown RBP17.12■□□□□ 0.33
OPTN-210ENST00000482140 KLF18A0A0U1RQI7 1052 aa17.11■□□□□ 0.33
OPTN-210ENST00000482140 NR3C2P08235 984 aa17.11■□□□□ 0.33
OPTN-210ENST00000482140 MYCLP12524 364 aaPredicted RBP17.11■□□□□ 0.33
OPTN-210ENST00000482140 RTN1Q16799 776 aa17.11■□□□□ 0.33
OPTN-210ENST00000482140 TMTC3Q6ZXV5 915 aa17.11■□□□□ 0.33
OPTN-210ENST00000482140 FCHSD1Q86WN1 690 aa17.11■□□□□ 0.33
OPTN-210ENST00000482140 POLR3EQ9NVU0 708 aa17.11■□□□□ 0.33
OPTN-210ENST00000482140 LTBP2Q14767 1821 aa17.1■□□□□ 0.33
OPTN-210ENST00000482140 GOLGA8AA7E2F4 631 aa17.1■□□□□ 0.33
OPTN-210ENST00000482140 GOLGA8BA8MQT2 603 aa17.1■□□□□ 0.33
OPTN-210ENST00000482140 ARVCFO00192 962 aa17.1■□□□□ 0.33
OPTN-210ENST00000482140 TLR3O15455 904 aaKnown RBP17.1■□□□□ 0.33
OPTN-210ENST00000482140 EPB41L2O43491 1005 aaKnown RBP17.1■□□□□ 0.33
OPTN-210ENST00000482140 EIF3JO75822 258 aaKnown RBP17.1■□□□□ 0.33
OPTN-210ENST00000482140 CPA1P15085 419 aa17.1■□□□□ 0.33
OPTN-210ENST00000482140 Q6ZUG5 572 aa17.1■□□□□ 0.33
OPTN-210ENST00000482140 SMARCC2Q8TAQ2 1214 aa17.1■□□□□ 0.33
OPTN-210ENST00000482140 TOX2Q96NM4 488 aa17.1■□□□□ 0.33
OPTN-210ENST00000482140 PDCD2LQ9BRP1 358 aa17.1■□□□□ 0.33
OPTN-210ENST00000482140 TMEM39AQ9NV64 488 aa17.1■□□□□ 0.33
OPTN-210ENST00000482140 PCDH10Q9P2E7 1040 aa17.1■□□□□ 0.33
OPTN-210ENST00000482140 BRPF3Q9ULD4 1205 aa17.1■□□□□ 0.33
OPTN-210ENST00000482140 MYL3P08590 195 aa17.09■□□□□ 0.33
OPTN-210ENST00000482140 CASTP20810 708 aaKnown RBP17.09■□□□□ 0.33
OPTN-210ENST00000482140 CCND2P30279 289 aa17.09■□□□□ 0.33
OPTN-210ENST00000482140 PGM5Q15124 567 aa17.09■□□□□ 0.33
OPTN-210ENST00000482140 ANKRD33Q7Z3H0 272 aa17.09■□□□□ 0.33
OPTN-210ENST00000482140 COPS5Q92905 334 aa17.09■□□□□ 0.33
OPTN-210ENST00000482140 MRVI1Q9Y6F6 885 aa17.09■□□□□ 0.33
OPTN-210ENST00000482140 DNAH12Q6ZR08 3092 aa17.08■□□□□ 0.33
OPTN-210ENST00000482140 MYH7BA7E2Y1 1941 aa17.08■□□□□ 0.33
OPTN-210ENST00000482140 hCG_1642624A0A1W2PR95 340 aa17.08■□□□□ 0.32
OPTN-210ENST00000482140 TRIM43BA6NCK2 446 aa17.08■□□□□ 0.32
OPTN-210ENST00000482140 ARIH2O95376 493 aa17.08■□□□□ 0.32
OPTN-210ENST00000482140 GH1P01241 217 aa17.08■□□□□ 0.32
OPTN-210ENST00000482140 RAG1P15918 1043 aa17.08■□□□□ 0.32
OPTN-210ENST00000482140 RPS6KB1P23443 525 aa17.08■□□□□ 0.32
OPTN-210ENST00000482140 FXR1P51114 621 aaKnown RBP eCLIP17.08■□□□□ 0.32
OPTN-210ENST00000482140 ITGA7Q13683 1181 aa17.08■□□□□ 0.32
OPTN-210ENST00000482140 LY6KQ17RY6 165 aa17.08■□□□□ 0.32
OPTN-210ENST00000482140 HEATR3Q7Z4Q2 680 aa17.08■□□□□ 0.32
OPTN-210ENST00000482140 SH3RF1Q7Z6J0 888 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms