RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 MYL5Q02045 173 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 SPP2Q13103 211 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 KCNB1Q14721 858 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 KARSQ15046 597 aaKnown RBP13.18□□□□□ -0.3
GGPS1-205ENST00000482013 NAALADL2Q58DX5 795 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 SH3D19Q5HYK7 790 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 HYIQ5T013 277 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 KRT79Q5XKE5 535 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 CCDC174Q6PII3 467 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 PLA2G4DQ86XP0 818 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 SULF1Q8IWU6 871 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 KCTD17Q8N5Z5 321 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 RASSF8Q8NHQ8 419 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 RBM46Q8TBY0 533 aaKnown RBP13.18□□□□□ -0.3
GGPS1-205ENST00000482013 ENOX1Q8TC92 643 aaKnown RBP13.18□□□□□ -0.3
GGPS1-205ENST00000482013 HAS1Q92839 578 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 MRFAP1L1Q96HT8 127 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 TRIM5Q9C035 493 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 TTC12Q9H892 705 aaPredicted RBP13.18□□□□□ -0.3
GGPS1-205ENST00000482013 SLC38A10Q9HBR0 1119 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.18□□□□□ -0.3
GGPS1-205ENST00000482013 PPP1R9AQ9ULJ8 1098 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 PCDHA12Q9UN75 941 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 SMCHD1A6NHR9 2005 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 MYPNQ86TC9 1320 aa13.17□□□□□ -0.3
GGPS1-205ENST00000482013 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.17□□□□□ -0.3
GGPS1-205ENST00000482013 AP5Z1O43299 807 aa13.17□□□□□ -0.3
GGPS1-205ENST00000482013 VCAM1P19320 739 aa13.17□□□□□ -0.3
GGPS1-205ENST00000482013 HSD17B4P51659 736 aa13.17□□□□□ -0.3
GGPS1-205ENST00000482013 ZNF75DP51815 510 aa13.17□□□□□ -0.3
GGPS1-205ENST00000482013 OAZ1P54368 228 aa13.17□□□□□ -0.3
GGPS1-205ENST00000482013 MAP3K9P80192 1104 aa13.17□□□□□ -0.3
GGPS1-205ENST00000482013 PLCB2Q00722 1185 aa13.17□□□□□ -0.3
GGPS1-205ENST00000482013 MTMR2Q13614 643 aa13.17□□□□□ -0.3
GGPS1-205ENST00000482013 NCAPHQ15003 741 aa13.17□□□□□ -0.3
GGPS1-205ENST00000482013 CCDC84Q86UT8 332 aaPredicted RBP13.17□□□□□ -0.3
GGPS1-205ENST00000482013 GRAMD1CQ8IYS0 662 aa13.17□□□□□ -0.3
GGPS1-205ENST00000482013 PIAS4Q8N2W9 510 aaPredicted RBP13.17□□□□□ -0.3
GGPS1-205ENST00000482013 CCDC47Q96A33 483 aaKnown RBP13.17□□□□□ -0.3
GGPS1-205ENST00000482013 MMTAG2Q9BU76 263 aaKnown RBP13.17□□□□□ -0.3
GGPS1-205ENST00000482013 NT5C3AQ9H0P0 336 aa13.17□□□□□ -0.3
GGPS1-205ENST00000482013 FBXO28Q9NVF7 368 aa13.17□□□□□ -0.3
GGPS1-205ENST00000482013 CCPG1Q9ULG6 757 aa13.17□□□□□ -0.3
GGPS1-205ENST00000482013 CTDP1Q9Y5B0 961 aaPredicted RBP13.17□□□□□ -0.3
GGPS1-205ENST00000482013 ZNF536O15090 1300 aa13.16□□□□□ -0.3
GGPS1-205ENST00000482013 KDM3AQ9Y4C1 1321 aa13.16□□□□□ -0.3
GGPS1-205ENST00000482013 SSC5DA1L4H1 1573 aa13.16□□□□□ -0.3
GGPS1-205ENST00000482013 PP2D1A8MPX8 630 aa13.16□□□□□ -0.3
GGPS1-205ENST00000482013 PPP1R12BO60237 982 aaPredicted RBP13.16□□□□□ -0.3
GGPS1-205ENST00000482013 CFBP00751 764 aa13.16□□□□□ -0.3
GGPS1-205ENST00000482013 RPN1P04843 607 aaKnown RBP13.16□□□□□ -0.3
GGPS1-205ENST00000482013 PTMAP06454 111 aaKnown RBP13.16□□□□□ -0.3
GGPS1-205ENST00000482013 PLCG1P19174 1290 aa13.16□□□□□ -0.3
GGPS1-205ENST00000482013 BMP6P22004 513 aa13.16□□□□□ -0.3
GGPS1-205ENST00000482013 CDC25AP30304 524 aa13.16□□□□□ -0.3
GGPS1-205ENST00000482013 PPP1R2P41236 205 aa13.16□□□□□ -0.3
GGPS1-205ENST00000482013 CNNM4Q6P4Q7 775 aa13.16□□□□□ -0.3
GGPS1-205ENST00000482013 ETNPPLQ8TBG4 499 aa13.16□□□□□ -0.3
GGPS1-205ENST00000482013 ZKSCAN4Q969J2 545 aaPredicted RBP13.16□□□□□ -0.3
GGPS1-205ENST00000482013 CDK5RAP3Q96JB5 506 aa13.16□□□□□ -0.3
GGPS1-205ENST00000482013 MTRQ99707 1265 aa13.16□□□□□ -0.3
GGPS1-205ENST00000482013 C7orf25Q9BPX7 421 aa13.16□□□□□ -0.3
GGPS1-205ENST00000482013 TANGO6Q9C0B7 1094 aa13.16□□□□□ -0.3
GGPS1-205ENST00000482013 RPAP3Q9H6T3 665 aaPredicted RBP13.16□□□□□ -0.3
GGPS1-205ENST00000482013 TMOD4Q9NZQ9 345 aa13.16□□□□□ -0.3
GGPS1-205ENST00000482013 ADAMTS5Q9UNA0 930 aa13.16□□□□□ -0.3
GGPS1-205ENST00000482013 AFG3L2Q9Y4W6 797 aa13.16□□□□□ -0.3
GGPS1-205ENST00000482013 ZHX2Q9Y6X8 837 aa13.16□□□□□ -0.3
GGPS1-205ENST00000482013 RBBP6Q7Z6E9 1792 aaKnown RBP13.16□□□□□ -0.3
GGPS1-205ENST00000482013 PAPPA2Q9BXP8 1791 aa13.16□□□□□ -0.3
GGPS1-205ENST00000482013 RLFQ13129 1914 aa13.15□□□□□ -0.3
GGPS1-205ENST00000482013 A0A087WWV3 80 aa13.15□□□□□ -0.3
GGPS1-205ENST00000482013 GLTPD2A6NH11 291 aa13.15□□□□□ -0.3
GGPS1-205ENST00000482013 ATP2A1O14983 1001 aa13.15□□□□□ -0.3
GGPS1-205ENST00000482013 FLOT1O75955 427 aa13.15□□□□□ -0.3
GGPS1-205ENST00000482013 NF2P35240 595 aa13.15□□□□□ -0.3
GGPS1-205ENST00000482013 IREB2P48200 963 aaKnown RBP13.15□□□□□ -0.3
GGPS1-205ENST00000482013 GRB10Q13322 594 aa13.15□□□□□ -0.3
GGPS1-205ENST00000482013 DHX8Q14562 1220 aaKnown RBP13.15□□□□□ -0.3
GGPS1-205ENST00000482013 TKFCQ3LXA3 575 aa13.15□□□□□ -0.3
GGPS1-205ENST00000482013 TMEM119Q4V9L6 283 aa13.15□□□□□ -0.3
GGPS1-205ENST00000482013 ZNF658Q5TYW1 1059 aaPredicted RBP13.15□□□□□ -0.3
GGPS1-205ENST00000482013 PRAMEF18Q5VWM3 479 aa13.15□□□□□ -0.3
GGPS1-205ENST00000482013 ISM2Q6H9L7 571 aa13.15□□□□□ -0.3
GGPS1-205ENST00000482013 SV2BQ7L1I2 683 aa13.15□□□□□ -0.3
GGPS1-205ENST00000482013 NIPA1Q7RTP0 329 aa13.15□□□□□ -0.3
GGPS1-205ENST00000482013 FAM43AQ8N2R8 423 aa13.15□□□□□ -0.3
GGPS1-205ENST00000482013 P2RX7Q99572 595 aaKnown RBP13.15□□□□□ -0.3
GGPS1-205ENST00000482013 PVALEFA0A1B0GWK0 134 aa13.14□□□□□ -0.31
GGPS1-205ENST00000482013 IQCA1LA6NCM1 817 aa13.14□□□□□ -0.31
GGPS1-205ENST00000482013 VWA5AO00534 786 aa13.14□□□□□ -0.31
GGPS1-205ENST00000482013 RHOBTB3O94955 611 aa13.14□□□□□ -0.31
GGPS1-205ENST00000482013 HOXA13P31271 388 aaPredicted RBP13.14□□□□□ -0.31
GGPS1-205ENST00000482013 DSG3P32926 999 aa13.14□□□□□ -0.31
GGPS1-205ENST00000482013 ZNF76P36508 570 aa13.14□□□□□ -0.31
GGPS1-205ENST00000482013 CUL4BQ13620 913 aa13.14□□□□□ -0.31
GGPS1-205ENST00000482013 COG2Q14746 738 aa13.14□□□□□ -0.31
GGPS1-205ENST00000482013 CATSPERGQ6ZRH7 1159 aa13.14□□□□□ -0.31
GGPS1-205ENST00000482013 ZSCAN30Q86W11 494 aa13.14□□□□□ -0.31
GGPS1-205ENST00000482013 FCHSD1Q86WN1 690 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms