RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 CDC37Q16543 378 aaPredicted RBP17.74■□□□□ 0.43
RXRA-202ENST00000481739 KIAA1755Q5JYT7 1200 aa17.74■□□□□ 0.43
RXRA-202ENST00000481739 FAM83BQ5T0W9 1011 aa17.74■□□□□ 0.43
RXRA-202ENST00000481739 CCDC47Q96A33 483 aaKnown RBP17.74■□□□□ 0.43
RXRA-202ENST00000481739 CALML4Q96GE6 196 aa17.74■□□□□ 0.43
RXRA-202ENST00000481739 CTAGE1Q96RT6 745 aa17.74■□□□□ 0.43
RXRA-202ENST00000481739 AMNQ9BXJ7 453 aa17.74■□□□□ 0.43
RXRA-202ENST00000481739 RRAGCQ9HB90 399 aa17.74■□□□□ 0.43
RXRA-202ENST00000481739 AS3MTQ9HBK9 375 aa17.74■□□□□ 0.43
RXRA-202ENST00000481739 RPN1P04843 607 aaKnown RBP17.73■□□□□ 0.43
RXRA-202ENST00000481739 CDK11BP21127 795 aaKnown RBP17.73■□□□□ 0.43
RXRA-202ENST00000481739 SFPQP23246 707 aaKnown RBP eCLIP17.73■□□□□ 0.433e-6■■■□□ 18.9
RXRA-202ENST00000481739 TTLL12Q14166 644 aaPredicted RBP17.73■□□□□ 0.43
RXRA-202ENST00000481739 NAALADL2Q58DX5 795 aa17.73■□□□□ 0.43
RXRA-202ENST00000481739 MOXD1Q6UVY6 613 aa17.73■□□□□ 0.43
RXRA-202ENST00000481739 TMC6Q7Z403 805 aa17.73■□□□□ 0.43
RXRA-202ENST00000481739 MTRQ99707 1265 aa17.73■□□□□ 0.43
RXRA-202ENST00000481739 KCND1Q9NSA2 647 aa17.73■□□□□ 0.43
RXRA-202ENST00000481739 TMEM260Q9NX78 707 aa17.73■□□□□ 0.43
RXRA-202ENST00000481739 STK17AQ9UEE5 414 aa17.73■□□□□ 0.43
RXRA-202ENST00000481739 PCDHA1Q9Y5I3 950 aa17.73■□□□□ 0.43
RXRA-202ENST00000481739 PTPRAP18433 802 aa17.72■□□□□ 0.43
RXRA-202ENST00000481739 USP11P51784 963 aa17.72■□□□□ 0.43
RXRA-202ENST00000481739 LRMPQ12912 555 aa17.72■□□□□ 0.43
RXRA-202ENST00000481739 DNTTIP2Q5QJE6 756 aaKnown RBP17.72■□□□□ 0.43
RXRA-202ENST00000481739 SYDE2Q5VT97 1194 aa17.72■□□□□ 0.43
RXRA-202ENST00000481739 SAMD1Q6SPF0 538 aaPredicted RBP17.72■□□□□ 0.43
RXRA-202ENST00000481739 POTEDQ86YR6 584 aa17.72■□□□□ 0.43
RXRA-202ENST00000481739 VSTM4Q8IW00 320 aa17.72■□□□□ 0.43
RXRA-202ENST00000481739 CCDC112Q8NEF3 446 aa17.72■□□□□ 0.43
RXRA-202ENST00000481739 NAP1L5Q96NT1 182 aaPredicted RBP17.72■□□□□ 0.43
RXRA-202ENST00000481739 RWDD2AQ9UIY3 292 aa17.72■□□□□ 0.43
RXRA-202ENST00000481739 PPP1R3GB7ZBB8 358 aa17.72■□□□□ 0.43
RXRA-202ENST00000481739 IREB2P48200 963 aaKnown RBP17.72■□□□□ 0.43
RXRA-202ENST00000481739 SPAG1Q07617 926 aa17.72■□□□□ 0.43
RXRA-202ENST00000481739 SPP2Q13103 211 aa17.72■□□□□ 0.43
RXRA-202ENST00000481739 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.72■□□□□ 0.435e-9■■■■□ 22.2
RXRA-202ENST00000481739 ZHX2Q9Y6X8 837 aa17.72■□□□□ 0.43
RXRA-202ENST00000481739 FOSP01100 380 aaPredicted RBP17.71■□□□□ 0.43
RXRA-202ENST00000481739 POTEIP0CG38 1075 aa17.71■□□□□ 0.43
RXRA-202ENST00000481739 POTEJP0CG39 1038 aa17.71■□□□□ 0.43
RXRA-202ENST00000481739 SKILP12757 684 aa17.71■□□□□ 0.43
RXRA-202ENST00000481739 STAT2P52630 851 aa17.71■□□□□ 0.43
RXRA-202ENST00000481739 MAP3K9P80192 1104 aa17.71■□□□□ 0.43
RXRA-202ENST00000481739 STIM1Q13586 685 aa17.71■□□□□ 0.43
RXRA-202ENST00000481739 MTMR2Q13614 643 aa17.71■□□□□ 0.43
RXRA-202ENST00000481739 PRIMPOLQ96LW4 560 aa17.71■□□□□ 0.43
RXRA-202ENST00000481739 LRRC27Q9C0I9 530 aa17.71■□□□□ 0.43
RXRA-202ENST00000481739 KIAA1683Q9H0B3 1180 aa17.71■□□□□ 0.43
RXRA-202ENST00000481739 RHOBTB3O94955 611 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 TPM2P07951 284 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 PLCG1P19174 1290 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 CDC25AP30304 524 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 SNAP25P60880 206 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 PAK1Q13153 545 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 FBXO11Q86XK2 927 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 ZNF280CQ8ND82 737 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 CHURC1Q8WUH1 139 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 WDR18Q9BV38 432 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 BLZF1Q9H2G9 400 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 LRWD1Q9UFC0 647 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 DDX25Q9UHL0 483 aaKnown RBP17.7■□□□□ 0.42
RXRA-202ENST00000481739 CSADQ9Y600 493 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 PP2D1A8MPX8 630 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 PLA2G6O60733 806 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 TECP42680 631 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 USP14P54578 494 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 CCZ1BP86790 482 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 CCZ1P86791 482 aaPredicted RBP17.7■□□□□ 0.42
RXRA-202ENST00000481739 NOL9Q5SY16 702 aaKnown RBP17.7■□□□□ 0.42
RXRA-202ENST00000481739 CDKAL1Q5VV42 579 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 MAP1SQ66K74 1059 aaPredicted RBP17.7■□□□□ 0.42
RXRA-202ENST00000481739 TRMT44Q8IYL2 757 aaKnown RBP17.7■□□□□ 0.42
RXRA-202ENST00000481739 ZNF526Q8TF50 670 aaPredicted RBP17.7■□□□□ 0.42
RXRA-202ENST00000481739 KIFC2Q96AC6 838 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 C7orf25Q9BPX7 421 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 PRR12Q9ULL5 1215 aa17.7■□□□□ 0.42
RXRA-202ENST00000481739 CYP3A7-CYP3A51PA0A087WV96 503 aa17.69■□□□□ 0.42
RXRA-202ENST00000481739 TDP2O95551 362 aa17.69■□□□□ 0.42
RXRA-202ENST00000481739 CD44P16070 742 aaKnown RBP17.69■□□□□ 0.42
RXRA-202ENST00000481739 CYP3A7P24462 503 aa17.69■□□□□ 0.42
RXRA-202ENST00000481739 CASP1P29466 404 aa17.69■□□□□ 0.42
RXRA-202ENST00000481739 TXKP42681 527 aa17.69■□□□□ 0.42
RXRA-202ENST00000481739 DGKZQ13574 1117 aa17.69■□□□□ 0.42
RXRA-202ENST00000481739 VGLL4Q14135 290 aa17.69■□□□□ 0.42
RXRA-202ENST00000481739 UBE2SQ16763 222 aa17.69■□□□□ 0.42
RXRA-202ENST00000481739 KRT79Q5XKE5 535 aa17.69■□□□□ 0.42
RXRA-202ENST00000481739 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.69■□□□□ 0.42
RXRA-202ENST00000481739 ANKRD20A12PQ8NF67 263 aa17.69■□□□□ 0.42
RXRA-202ENST00000481739 LPAR1Q92633 364 aa17.69■□□□□ 0.42
RXRA-202ENST00000481739 MED15Q96RN5 788 aa17.69■□□□□ 0.42
RXRA-202ENST00000481739 FEM1BQ9UK73 627 aa17.69■□□□□ 0.42
RXRA-202ENST00000481739 A0A1B0GTH6 734 aa17.68■□□□□ 0.42
RXRA-202ENST00000481739 SLC37A4O43826 429 aa17.68■□□□□ 0.42
RXRA-202ENST00000481739 TPD52L1Q16890 204 aaPredicted RBP17.68■□□□□ 0.42
RXRA-202ENST00000481739 FILIP1LQ4L180 1135 aa17.68■□□□□ 0.42
RXRA-202ENST00000481739 SPECC1LQ69YQ0 1117 aa17.68■□□□□ 0.42
RXRA-202ENST00000481739 KLHL10Q6JEL2 608 aa17.68■□□□□ 0.42
RXRA-202ENST00000481739 FAM160B2Q86V87 743 aa17.68■□□□□ 0.42
RXRA-202ENST00000481739 STAMQ92783 540 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms